RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.08□□□□□ -1.12
LSAMP-204ENST00000475403 NUP88Q99567 741 aaPredicted RBP8.08□□□□□ -1.12
LSAMP-204ENST00000475403 POP1Q99575 1024 aaKnown RBP8.08□□□□□ -1.12
LSAMP-204ENST00000475403 CCDC8Q9H0W5 538 aaPredicted RBP8.08□□□□□ -1.12
LSAMP-204ENST00000475403 ACAD9Q9H845 621 aa8.08□□□□□ -1.12
LSAMP-204ENST00000475403 DCP1AQ9NPI6 582 aaPredicted RBP8.08□□□□□ -1.12
LSAMP-204ENST00000475403 POLR3EQ9NVU0 708 aa8.08□□□□□ -1.12
LSAMP-204ENST00000475403 TLR7Q9NYK1 1049 aaKnown RBP8.08□□□□□ -1.12
LSAMP-204ENST00000475403 PRKAG3Q9UGI9 489 aa8.08□□□□□ -1.12
LSAMP-204ENST00000475403 CTNNA3Q9UI47 895 aa8.08□□□□□ -1.12
LSAMP-204ENST00000475403 DBNLQ9UJU6 430 aaKnown RBP8.08□□□□□ -1.12
LSAMP-204ENST00000475403 CFAP54Q96N23 3096 aa8.08□□□□□ -1.12
LSAMP-204ENST00000475403 SIP14410 1827 aa8.08□□□□□ -1.12
LSAMP-204ENST00000475403 RAD50Q92878 1312 aa8.07□□□□□ -1.12
LSAMP-204ENST00000475403 DDX11L8A8MPP1 907 aa8.07□□□□□ -1.12
LSAMP-204ENST00000475403 USP17L12C9JPN9 530 aa8.07□□□□□ -1.12
LSAMP-204ENST00000475403 USP17L21D6R901 530 aa8.07□□□□□ -1.12
LSAMP-204ENST00000475403 SURF6O75683 361 aaKnown RBP8.07□□□□□ -1.12
LSAMP-204ENST00000475403 IQCF3P0C7M6 154 aa8.07□□□□□ -1.12
LSAMP-204ENST00000475403 PDIA4P13667 645 aaKnown RBP8.07□□□□□ -1.12
LSAMP-204ENST00000475403 CDK8P49336 464 aa8.07□□□□□ -1.12
LSAMP-204ENST00000475403 CHMP4BP1P59074 171 aa8.07□□□□□ -1.12
LSAMP-204ENST00000475403 WDR5P61964 334 aaKnown RBP8.07□□□□□ -1.12
LSAMP-204ENST00000475403 CNTN2Q02246 1040 aa8.07□□□□□ -1.12
LSAMP-204ENST00000475403 FAM117BQ6P1L5 589 aa8.07□□□□□ -1.12
LSAMP-204ENST00000475403 TMCO2Q7Z6W1 182 aaPredicted RBP8.07□□□□□ -1.12
LSAMP-204ENST00000475403 SIAH1Q8IUQ4 282 aa8.07□□□□□ -1.12
LSAMP-204ENST00000475403 ADHFE1Q8IWW8 467 aa8.07□□□□□ -1.12
LSAMP-204ENST00000475403 PRSS33Q8NF86 280 aa8.07□□□□□ -1.12
LSAMP-204ENST00000475403 ANKS1AQ92625 1134 aa8.07□□□□□ -1.12
LSAMP-204ENST00000475403 FGD4Q96M96 766 aa8.07□□□□□ -1.12
LSAMP-204ENST00000475403 SUGCTQ9HAC7 445 aa8.07□□□□□ -1.12
LSAMP-204ENST00000475403 MUTYHQ9UIF7 546 aa8.07□□□□□ -1.12
LSAMP-204ENST00000475403 Q9Y3F1 56 aa8.07□□□□□ -1.12
LSAMP-204ENST00000475403 ZNF532Q9HCE3 1301 aa8.06□□□□□ -1.12
LSAMP-204ENST00000475403 BAZ2AQ9UIF9 1905 aaKnown RBP8.06□□□□□ -1.12
LSAMP-204ENST00000475403 POTEB3A0JP26 581 aa8.06□□□□□ -1.12
LSAMP-204ENST00000475403 LINC01553A4QN01 128 aa8.06□□□□□ -1.12
LSAMP-204ENST00000475403 ATP2A1O14983 1001 aa8.06□□□□□ -1.12
LSAMP-204ENST00000475403 OFD1O75665 1012 aa8.06□□□□□ -1.12
LSAMP-204ENST00000475403 PDE6AP16499 860 aa8.06□□□□□ -1.12
LSAMP-204ENST00000475403 PTGS1P23219 599 aa8.06□□□□□ -1.12
LSAMP-204ENST00000475403 ERVK-21P61565 698 aa8.06□□□□□ -1.12
LSAMP-204ENST00000475403 IKQ13123 557 aaPredicted RBP8.06□□□□□ -1.12
LSAMP-204ENST00000475403 PKN1Q16512 942 aa8.06□□□□□ -1.12
LSAMP-204ENST00000475403 LRRFIP1Q32MZ4 808 aaKnown RBP8.06□□□□□ -1.12
LSAMP-204ENST00000475403 HS1BP3Q53T59 392 aa8.06□□□□□ -1.12
LSAMP-204ENST00000475403 IQSEC1Q6DN90 963 aa8.06□□□□□ -1.12
LSAMP-204ENST00000475403 POTEBQ6S5H4 581 aa8.06□□□□□ -1.12
LSAMP-204ENST00000475403 KIAA1211Q6ZU35 1233 aa8.06□□□□□ -1.12
LSAMP-204ENST00000475403 C16orf86Q6ZW13 317 aa8.06□□□□□ -1.12
LSAMP-204ENST00000475403 LCORLQ8N3X6 602 aa8.06□□□□□ -1.12
LSAMP-204ENST00000475403 NEK9Q8TD19 979 aa8.06□□□□□ -1.12
LSAMP-204ENST00000475403 PBXIP1Q96AQ6 731 aa8.06□□□□□ -1.12
LSAMP-204ENST00000475403 VWCEQ96DN2 955 aa8.06□□□□□ -1.12
LSAMP-204ENST00000475403 RAD9AQ99638 391 aa8.06□□□□□ -1.12
LSAMP-204ENST00000475403 MTG1Q9BT17 334 aaPredicted RBP8.06□□□□□ -1.12
LSAMP-204ENST00000475403 KATNBL1Q9H079 304 aa8.06□□□□□ -1.12
LSAMP-204ENST00000475403 CLDND1Q9NY35 253 aa8.06□□□□□ -1.12
LSAMP-204ENST00000475403 F5H6K3 240 aa8.05□□□□□ -1.12
LSAMP-204ENST00000475403 GJB5O95377 273 aa8.05□□□□□ -1.12
LSAMP-204ENST00000475403 NDUFB10O96000 172 aa8.05□□□□□ -1.12
LSAMP-204ENST00000475403 OAZ1P54368 228 aa8.05□□□□□ -1.12
LSAMP-204ENST00000475403 DEFB103AP81534 67 aa8.05□□□□□ -1.12
LSAMP-204ENST00000475403 PURAQ00577 322 aaKnown RBP8.05□□□□□ -1.12
LSAMP-204ENST00000475403 KLRC3Q07444 240 aa8.05□□□□□ -1.12
LSAMP-204ENST00000475403 CCDC173Q0VFZ6 552 aa8.05□□□□□ -1.12
LSAMP-204ENST00000475403 NBPF20Q3BBV1 942 aa8.05□□□□□ -1.12
LSAMP-204ENST00000475403 NFRKBQ6P4R8 1299 aa8.05□□□□□ -1.12
LSAMP-204ENST00000475403 CNKSR3Q6P9H4 555 aa8.05□□□□□ -1.12
LSAMP-204ENST00000475403 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.05□□□□□ -1.12
LSAMP-204ENST00000475403 BANK1Q8NDB2 785 aa8.05□□□□□ -1.12
LSAMP-204ENST00000475403 OR6J1Q8NGC5 347 aa8.05□□□□□ -1.12
LSAMP-204ENST00000475403 CAGE1Q8TC20 777 aa8.05□□□□□ -1.12
LSAMP-204ENST00000475403 ATOH1Q92858 354 aaPredicted RBP8.05□□□□□ -1.12
LSAMP-204ENST00000475403 PABPC5Q96DU9 382 aaKnown RBP8.05□□□□□ -1.12
LSAMP-204ENST00000475403 MRPL38Q96DV4 380 aaKnown RBP8.05□□□□□ -1.12
LSAMP-204ENST00000475403 TRIM44Q96DX7 344 aaPredicted RBP8.05□□□□□ -1.12
LSAMP-204ENST00000475403 DNAJC2Q99543 621 aaKnown RBP8.05□□□□□ -1.12
LSAMP-204ENST00000475403 IRF2BPLQ9H1B7 796 aa8.05□□□□□ -1.12
LSAMP-204ENST00000475403 ARMT1Q9H993 441 aa8.05□□□□□ -1.12
LSAMP-204ENST00000475403 GRPEL1Q9HAV7 217 aa8.05□□□□□ -1.12
LSAMP-204ENST00000475403 SLC38A10Q9HBR0 1119 aa8.05□□□□□ -1.12
LSAMP-204ENST00000475403 VTA1Q9NP79 307 aa8.05□□□□□ -1.12
LSAMP-204ENST00000475403 PDGFCQ9NRA1 345 aa8.05□□□□□ -1.12
LSAMP-204ENST00000475403 ATP8A2Q9NTI2 1148 aa8.05□□□□□ -1.12
LSAMP-204ENST00000475403 RNF146Q9NTX7 359 aa8.05□□□□□ -1.12
LSAMP-204ENST00000475403 FAM86C1Q9NVL1 165 aa8.05□□□□□ -1.12
LSAMP-204ENST00000475403 FEM1BQ9UK73 627 aa8.05□□□□□ -1.12
LSAMP-204ENST00000475403 PTPRSQ13332 1948 aa8.04□□□□□ -1.12
LSAMP-204ENST00000475403 CYP2D7A0A087X1C5 515 aa8.04□□□□□ -1.12
LSAMP-204ENST00000475403 TMEM221A6NGB7 291 aa8.04□□□□□ -1.12
LSAMP-204ENST00000475403 M0R296 226 aa8.04□□□□□ -1.12
LSAMP-204ENST00000475403 EFCAB14O75071 495 aa8.04□□□□□ -1.12
LSAMP-204ENST00000475403 KIF20AO95235 890 aa8.04□□□□□ -1.12
LSAMP-204ENST00000475403 MBD4O95243 580 aa8.04□□□□□ -1.12
LSAMP-204ENST00000475403 PARNO95453 639 aaKnown RBP8.04□□□□□ -1.12
LSAMP-204ENST00000475403 CT47B1P0C2W7 299 aaPredicted RBP8.04□□□□□ -1.12
LSAMP-204ENST00000475403 MCM4P33991 863 aa8.04□□□□□ -1.12
LSAMP-204ENST00000475403 IRS1P35568 1242 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms