RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 OPLAHO14841 1288 aa18.8■□□□□ 0.6
SRM-204ENST00000475189 SEPT4O43236 478 aa18.8■□□□□ 0.6
SRM-204ENST00000475189 CALML3P27482 149 aa18.8■□□□□ 0.6
SRM-204ENST00000475189 TOB2Q14106 344 aaPredicted RBP18.8■□□□□ 0.6
SRM-204ENST00000475189 RTN1Q16799 776 aa18.8■□□□□ 0.6
SRM-204ENST00000475189 MCF2L2Q86YR7 1114 aa18.8■□□□□ 0.6
SRM-204ENST00000475189 CCDC82Q8N4S0 544 aa18.8■□□□□ 0.6
SRM-204ENST00000475189 RRP36Q96EU6 259 aaKnown RBP18.8■□□□□ 0.6
SRM-204ENST00000475189 FAM217BQ9NTX9 383 aaPredicted RBP18.8■□□□□ 0.6
SRM-204ENST00000475189 CNPY2Q9Y2B0 182 aa18.8■□□□□ 0.6
SRM-204ENST00000475189 GTF3C3Q9Y5Q9 886 aa18.8■□□□□ 0.6
SRM-204ENST00000475189 LRRC37A2A6NM11 1700 aa18.8■□□□□ 0.6
SRM-204ENST00000475189 GOLGA8AA7E2F4 631 aa18.79■□□□□ 0.6
SRM-204ENST00000475189 GOLGA8BA8MQT2 603 aa18.79■□□□□ 0.6
SRM-204ENST00000475189 MSCO60682 206 aa18.79■□□□□ 0.6
SRM-204ENST00000475189 CDC27P30260 824 aa18.79■□□□□ 0.6
SRM-204ENST00000475189 TRAF1Q13077 416 aa18.79■□□□□ 0.6
SRM-204ENST00000475189 UBE2Q1Q7Z7E8 422 aa18.79■□□□□ 0.6
SRM-204ENST00000475189 IL17RAQ96F46 866 aa18.79■□□□□ 0.6
SRM-204ENST00000475189 ABHD16BQ9H3Z7 469 aa18.79■□□□□ 0.6
SRM-204ENST00000475189 ADD3Q9UEY8 706 aaKnown RBP18.79■□□□□ 0.6
SRM-204ENST00000475189 NAP1L2Q9ULW6 460 aaPredicted RBP18.79■□□□□ 0.6
SRM-204ENST00000475189 DDX49Q9Y6V7 483 aaKnown RBP18.79■□□□□ 0.6
SRM-204ENST00000475189 ALDH5A1P51649 535 aaPredicted RBP18.78■□□□□ 0.6
SRM-204ENST00000475189 EVCP57679 992 aa18.78■□□□□ 0.6
SRM-204ENST00000475189 GHRHRQ02643 423 aa18.78■□□□□ 0.6
SRM-204ENST00000475189 FUT2Q10981 343 aa18.78■□□□□ 0.6
SRM-204ENST00000475189 ACVR2BQ13705 512 aa18.78■□□□□ 0.6
SRM-204ENST00000475189 ANKLE1Q8NAG6 615 aa18.78■□□□□ 0.6
SRM-204ENST00000475189 MORC4Q8TE76 937 aa18.78■□□□□ 0.6
SRM-204ENST00000475189 KATNBL1Q9H079 304 aa18.78■□□□□ 0.6
SRM-204ENST00000475189 CNTNAP5Q8WYK1 1306 aa18.77■□□□□ 0.6
SRM-204ENST00000475189 PDE4DIPQ5VU43 2346 aa18.77■□□□□ 0.6
SRM-204ENST00000475189 LOC102724159A0A0B4J2E5 919 aa18.77■□□□□ 0.6
SRM-204ENST00000475189 hCG_1642624A0A1W2PR95 340 aa18.77■□□□□ 0.6
SRM-204ENST00000475189 FARP2O94887 1054 aaPredicted RBP18.77■□□□□ 0.6
SRM-204ENST00000475189 CFBP00751 764 aa18.77■□□□□ 0.6
SRM-204ENST00000475189 ADD1P35611 737 aaKnown RBP18.77■□□□□ 0.6
SRM-204ENST00000475189 MNX1P50219 401 aaPredicted RBP18.77■□□□□ 0.6
SRM-204ENST00000475189 METAP2P50579 478 aaKnown RBP eCLIP18.77■□□□□ 0.6
SRM-204ENST00000475189 PPP2R5BQ15173 497 aa18.77■□□□□ 0.6
SRM-204ENST00000475189 PWP2Q15269 919 aaKnown RBP18.77■□□□□ 0.6
SRM-204ENST00000475189 ANO1Q5XXA6 986 aa18.77■□□□□ 0.6
SRM-204ENST00000475189 DNERQ8NFT8 737 aa18.77■□□□□ 0.6
SRM-204ENST00000475189 SYTL5Q8TDW5 730 aaPredicted RBP18.77■□□□□ 0.6
SRM-204ENST00000475189 PDRG1Q9NUG6 133 aa18.77■□□□□ 0.6
SRM-204ENST00000475189 COL20A1Q9P218 1284 aa18.77■□□□□ 0.6
SRM-204ENST00000475189 SEC63Q9UGP8 760 aaKnown RBP18.77■□□□□ 0.6
SRM-204ENST00000475189 ZHX1Q9UKY1 873 aaPredicted RBP18.77■□□□□ 0.6
SRM-204ENST00000475189 NID2Q14112 1375 aa18.77■□□□□ 0.6
SRM-204ENST00000475189 SLC34A2O95436 690 aa18.76■□□□□ 0.59
SRM-204ENST00000475189 AKR1A1P14550 325 aa18.76■□□□□ 0.59
SRM-204ENST00000475189 HSD17B4P51659 736 aa18.76■□□□□ 0.59
SRM-204ENST00000475189 SAMD3Q8N6K7 520 aa18.76■□□□□ 0.59
SRM-204ENST00000475189 DIS3LQ8TF46 1054 aaKnown RBP18.76■□□□□ 0.59
SRM-204ENST00000475189 TAAR1Q96RJ0 339 aa18.76■□□□□ 0.59
SRM-204ENST00000475189 FAM184BQ9ULE4 1060 aa18.76■□□□□ 0.59
SRM-204ENST00000475189 TNRC18O15417 2968 aaPredicted RBP18.76■□□□□ 0.59
SRM-204ENST00000475189 PDIA3P30101 505 aaKnown RBP18.75■□□□□ 0.59
SRM-204ENST00000475189 MAP3K20Q9NYL2 800 aaKnown RBP18.75■□□□□ 0.59
SRM-204ENST00000475189 CCDC196A0A1B0GTZ2 297 aa18.74■□□□□ 0.59
SRM-204ENST00000475189 EDNRBP24530 442 aa18.74■□□□□ 0.59
SRM-204ENST00000475189 CCDC144BQ3MJ40 725 aa18.74■□□□□ 0.59
SRM-204ENST00000475189 PAWRQ96IZ0 340 aaKnown RBP18.74■□□□□ 0.59
SRM-204ENST00000475189 LARP6Q9BRS8 491 aaKnown RBP18.74■□□□□ 0.59
SRM-204ENST00000475189 ALDH8A1Q9H2A2 487 aaPredicted RBP18.74■□□□□ 0.59
SRM-204ENST00000475189 V9GY48 417 aaPredicted RBP18.74■□□□□ 0.59
SRM-204ENST00000475189 MKI67P46013 3256 aaKnown RBP18.74■□□□□ 0.59
SRM-204ENST00000475189 KIAA1217Q5T5P2 1943 aa18.74■□□□□ 0.59
SRM-204ENST00000475189 GCOM1H8Y6P7 765 aaPredicted RBP18.73■□□□□ 0.59
SRM-204ENST00000475189 ADCY6O43306 1168 aa18.73■□□□□ 0.59
SRM-204ENST00000475189 POLR2MP0CAP2 368 aa18.73■□□□□ 0.59
SRM-204ENST00000475189 RARBP10826 455 aa18.73■□□□□ 0.59
SRM-204ENST00000475189 HOXA13P31271 388 aaPredicted RBP18.73■□□□□ 0.59
SRM-204ENST00000475189 CCT2P78371 535 aaKnown RBP18.73■□□□□ 0.59
SRM-204ENST00000475189 TAPT1Q6NXT6 567 aa18.73■□□□□ 0.59
SRM-204ENST00000475189 EEPD1Q7L9B9 569 aa18.73■□□□□ 0.59
SRM-204ENST00000475189 FBXO16Q8IX29 292 aaPredicted RBP18.73■□□□□ 0.59
SRM-204ENST00000475189 LENG1Q96BZ8 264 aaPredicted RBP18.73■□□□□ 0.59
SRM-204ENST00000475189 ZNF274Q96GC6 653 aaPredicted RBP18.73■□□□□ 0.59
SRM-204ENST00000475189 RMDN3Q96TC7 470 aa18.73■□□□□ 0.59
SRM-204ENST00000475189 VTA1Q9NP79 307 aa18.73■□□□□ 0.59
SRM-204ENST00000475189 PDGFCQ9NRA1 345 aa18.73■□□□□ 0.59
SRM-204ENST00000475189 ALPK3Q96L96 1907 aa18.72■□□□□ 0.59
SRM-204ENST00000475189 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.72■□□□□ 0.59
SRM-204ENST00000475189 B4DLN1 442 aa18.72■□□□□ 0.59
SRM-204ENST00000475189 MRPL12P52815 198 aaKnown RBP18.72■□□□□ 0.59
SRM-204ENST00000475189 PDE4DQ08499 809 aa18.72■□□□□ 0.59
SRM-204ENST00000475189 NTRK3Q16288 839 aa18.72■□□□□ 0.59
SRM-204ENST00000475189 NECAB2Q7Z6G3 386 aa18.72■□□□□ 0.59
SRM-204ENST00000475189 ARRDC4Q8NCT1 418 aa18.72■□□□□ 0.59
SRM-204ENST00000475189 NSUN6Q8TEA1 469 aaKnown RBP18.72■□□□□ 0.59
SRM-204ENST00000475189 GPKOWQ92917 476 aaPredicted RBP eCLIP18.72■□□□□ 0.59
SRM-204ENST00000475189 MPHOSPH6Q99547 160 aaKnown RBP18.72■□□□□ 0.59
SRM-204ENST00000475189 NCOA5Q9HCD5 579 aaKnown RBP18.72■□□□□ 0.59
SRM-204ENST00000475189 XPNPEP3Q9NQH7 507 aa18.72■□□□□ 0.59
SRM-204ENST00000475189 DUSP11O75319 330 aaKnown RBP18.71■□□□□ 0.59
SRM-204ENST00000475189 EIF2AK2P19525 551 aaKnown RBP18.71■□□□□ 0.59
SRM-204ENST00000475189 ADCYAP1R1P41586 468 aa18.71■□□□□ 0.59
SRM-204ENST00000475189 LRRC41Q15345 812 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms