RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 KIF5BP33176 963 aa18.16■□□□□ 0.5
TPR-205ENST00000474852 EIF4A3P38919 411 aaKnown RBP18.16■□□□□ 0.5
TPR-205ENST00000474852 KIF11P52732 1056 aa18.16■□□□□ 0.5
TPR-205ENST00000474852 CABP7Q86V35 215 aa18.16■□□□□ 0.5
TPR-205ENST00000474852 OSBPL9Q96SU4 736 aa18.16■□□□□ 0.5
TPR-205ENST00000474852 FAM169AQ9Y6X4 670 aa18.16■□□□□ 0.5
TPR-205ENST00000474852 BUB1O43683 1085 aa18.16■□□□□ 0.5
TPR-205ENST00000474852 NAP1L1P55209 391 aaKnown RBP18.16■□□□□ 0.5
TPR-205ENST00000474852 MECOMQ03112 1051 aa18.16■□□□□ 0.5
TPR-205ENST00000474852 PPARDQ03181 441 aa18.16■□□□□ 0.5
TPR-205ENST00000474852 LETM2Q2VYF4 491 aa18.16■□□□□ 0.5
TPR-205ENST00000474852 C3orf67Q6ZVT6 689 aa18.16■□□□□ 0.5
TPR-205ENST00000474852 FNBP4Q8N3X1 1017 aaPredicted RBP18.16■□□□□ 0.5
TPR-205ENST00000474852 SH2D3CQ8N5H7 860 aa18.16■□□□□ 0.5
TPR-205ENST00000474852 PNMA1Q8ND90 353 aa18.16■□□□□ 0.5
TPR-205ENST00000474852 DHTKD1Q96HY7 919 aaPredicted RBP18.16■□□□□ 0.5
TPR-205ENST00000474852 RUFY1Q96T51 708 aa18.16■□□□□ 0.5
TPR-205ENST00000474852 TRIM9Q9C026 710 aa18.16■□□□□ 0.5
TPR-205ENST00000474852 SH2D4AQ9H788 454 aa18.16■□□□□ 0.5
TPR-205ENST00000474852 BTG4Q9NY30 223 aa18.16■□□□□ 0.5
TPR-205ENST00000474852 CACNA1SQ13698 1873 aa18.16■□□□□ 0.5
TPR-205ENST00000474852 STRCP1A6NGW2 1772 aa18.16■□□□□ 0.5
TPR-205ENST00000474852 BCL9O00512 1426 aa18.15■□□□□ 0.5
TPR-205ENST00000474852 ZNF804BA4D1E1 1349 aa18.15■□□□□ 0.5
TPR-205ENST00000474852 FGRP09769 529 aa18.15■□□□□ 0.5
TPR-205ENST00000474852 USP17L8P0C7I0 530 aa18.15■□□□□ 0.5
TPR-205ENST00000474852 GOLGA8HP0CJ92 632 aa18.15■□□□□ 0.5
TPR-205ENST00000474852 PRDX5P30044 214 aa18.15■□□□□ 0.5
TPR-205ENST00000474852 ATP1A2P50993 1020 aa18.15■□□□□ 0.5
TPR-205ENST00000474852 TFAP4Q01664 338 aa18.15■□□□□ 0.5
TPR-205ENST00000474852 ZNF662Q6ZS27 426 aa18.15■□□□□ 0.5
TPR-205ENST00000474852 AMOTL1Q8IY63 956 aa18.15■□□□□ 0.5
TPR-205ENST00000474852 RETREG2Q8NC44 543 aa18.15■□□□□ 0.5
TPR-205ENST00000474852 MS4A14Q96JA4 679 aa18.15■□□□□ 0.5
TPR-205ENST00000474852 MCM9Q9NXL9 1143 aa18.15■□□□□ 0.5
TPR-205ENST00000474852 SALL4Q9UJQ4 1053 aa18.15■□□□□ 0.5
TPR-205ENST00000474852 TAF1P21675 1872 aa18.15■□□□□ 0.5
TPR-205ENST00000474852 PPFIA1Q13136 1202 aa18.15■□□□□ 0.5
TPR-205ENST00000474852 DYNLL2Q96FJ2 89 aa18.15■□□□□ 0.5
TPR-205ENST00000474852 DCCP43146 1447 aa18.15■□□□□ 0.5
TPR-205ENST00000474852 ESYT3A0FGR9 886 aa18.14■□□□□ 0.5
TPR-205ENST00000474852 BICDL2A1A5D9 508 aa18.14■□□□□ 0.5
TPR-205ENST00000474852 PDCLQ13371 301 aa18.14■□□□□ 0.5
TPR-205ENST00000474852 RRAGAQ7L523 313 aa18.14■□□□□ 0.5
TPR-205ENST00000474852 TMC4Q7Z404 712 aa18.14■□□□□ 0.5
TPR-205ENST00000474852 NOC3LQ8WTT2 800 aaKnown RBP18.14■□□□□ 0.5
TPR-205ENST00000474852 NSUN4Q96CB9 384 aaKnown RBP18.14■□□□□ 0.5
TPR-205ENST00000474852 FAM84BQ96KN1 310 aaPredicted RBP18.14■□□□□ 0.5
TPR-205ENST00000474852 TSGA10Q9BZW7 698 aa18.14■□□□□ 0.5
TPR-205ENST00000474852 TCP11L1Q9NUJ3 509 aa18.14■□□□□ 0.5
TPR-205ENST00000474852 TFCP2L1Q9NZI6 479 aa18.14■□□□□ 0.5
TPR-205ENST00000474852 GRIN2DO15399 1336 aa18.14■□□□□ 0.49
TPR-205ENST00000474852 A0A087WUV0 522 aaPredicted RBP18.14■□□□□ 0.49
TPR-205ENST00000474852 ZSCAN5CA6NGD5 496 aaPredicted RBP18.14■□□□□ 0.49
TPR-205ENST00000474852 ORC4O43929 436 aa18.14■□□□□ 0.49
TPR-205ENST00000474852 CCNT1O60563 726 aaKnown RBP18.14■□□□□ 0.49
TPR-205ENST00000474852 ERLIN2O94905 339 aa18.14■□□□□ 0.49
TPR-205ENST00000474852 NTSR2O95665 410 aa18.14■□□□□ 0.49
TPR-205ENST00000474852 KRT14P02533 472 aa18.14■□□□□ 0.49
TPR-205ENST00000474852 TTMPQ5BVD1 217 aa18.14■□□□□ 0.49
TPR-205ENST00000474852 MMGT1Q8N4V1 131 aa18.14■□□□□ 0.49
TPR-205ENST00000474852 CRNKL1Q9BZJ0 848 aaKnown RBP18.14■□□□□ 0.49
TPR-205ENST00000474852 SHTN1A0MZ66 631 aa18.13■□□□□ 0.49
TPR-205ENST00000474852 USP17L3A6NCW0 530 aa18.13■□□□□ 0.49
TPR-205ENST00000474852 USP17L4A6NCW7 530 aa18.13■□□□□ 0.49
TPR-205ENST00000474852 LRRC53A6NM62 1247 aa18.13■□□□□ 0.49
TPR-205ENST00000474852 TECP42680 631 aa18.13■□□□□ 0.49
TPR-205ENST00000474852 SLC35G1Q2M3R5 365 aa18.13■□□□□ 0.49
TPR-205ENST00000474852 USP17L1Q7RTZ2 530 aa18.13■□□□□ 0.49
TPR-205ENST00000474852 FAM114A1Q8IWE2 563 aa18.13■□□□□ 0.49
TPR-205ENST00000474852 KIAA0895Q8NCT3 520 aa18.13■□□□□ 0.49
TPR-205ENST00000474852 CCDC47Q96A33 483 aaKnown RBP18.13■□□□□ 0.49
TPR-205ENST00000474852 CCSER1Q9C0I3 900 aa18.13■□□□□ 0.49
TPR-205ENST00000474852 RBM12Q9NTZ6 932 aaKnown RBP18.13■□□□□ 0.49
TPR-205ENST00000474852 STIM2Q9P246 746 aa18.13■□□□□ 0.49
TPR-205ENST00000474852 EIF3HO15372 352 aaKnown RBP eCLIP18.13■□□□□ 0.495e-7■■□□□ 12.6
TPR-205ENST00000474852 GFPT1Q06210 699 aaPredicted RBP18.13■□□□□ 0.49
TPR-205ENST00000474852 HAUS3Q68CZ6 603 aa18.13■□□□□ 0.49
TPR-205ENST00000474852 C8orf74Q6P047 294 aa18.13■□□□□ 0.49
TPR-205ENST00000474852 CCDC155Q8N6L0 562 aa18.13■□□□□ 0.49
TPR-205ENST00000474852 KAT2BQ92831 832 aa18.13■□□□□ 0.49
TPR-205ENST00000474852 SEMA6BQ9H3T3 888 aa18.13■□□□□ 0.49
TPR-205ENST00000474852 IL17RBQ9NRM6 502 aa18.13■□□□□ 0.49
TPR-205ENST00000474852 PLAGL2Q9UPG8 496 aa18.13■□□□□ 0.49
TPR-205ENST00000474852 FLT1P17948 1338 aa18.13■□□□□ 0.49
TPR-205ENST00000474852 NHSL1Q5SYE7 1610 aa18.13■□□□□ 0.49
TPR-205ENST00000474852 CYTH3O43739 400 aa18.13■□□□□ 0.49
TPR-205ENST00000474852 ZEB2O60315 1214 aa18.13■□□□□ 0.49
TPR-205ENST00000474852 PCP11498 1178 aaKnown RBP18.13■□□□□ 0.49
TPR-205ENST00000474852 CRKLP46109 303 aaKnown RBP18.13■□□□□ 0.49
TPR-205ENST00000474852 RNASE9P60153 205 aaKnown RBP18.13■□□□□ 0.49
TPR-205ENST00000474852 RASSF7Q02833 373 aa18.13■□□□□ 0.49
TPR-205ENST00000474852 FBXW10Q5XX13 1052 aa18.13■□□□□ 0.49
TPR-205ENST00000474852 DYMQ7RTS9 669 aa18.13■□□□□ 0.49
TPR-205ENST00000474852 IFT81Q8WYA0 676 aa18.13■□□□□ 0.49
TPR-205ENST00000474852 ALS2CR12Q96Q35 445 aa18.13■□□□□ 0.49
TPR-205ENST00000474852 STX8Q9UNK0 236 aa18.13■□□□□ 0.49
TPR-205ENST00000474852 TEX2Q8IWB9 1127 aa18.12■□□□□ 0.49
TPR-205ENST00000474852 ERGIC2Q96RQ1 377 aa18.12■□□□□ 0.49
TPR-205ENST00000474852 HYOU1Q9Y4L1 999 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms