RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 FILIP1LQ4L180 1135 aa24.49■■□□□ 1.51
CCM2-206ENST00000474617 COBLL1Q53SF7 1204 aa24.49■■□□□ 1.51
CCM2-206ENST00000474617 POTEDQ86YR6 584 aa24.49■■□□□ 1.51
CCM2-206ENST00000474617 CHURC1Q8WUH1 139 aa24.49■■□□□ 1.51
CCM2-206ENST00000474617 MTRQ99707 1265 aa24.49■■□□□ 1.51
CCM2-206ENST00000474617 DDX25Q9UHL0 483 aaKnown RBP24.49■■□□□ 1.51
CCM2-206ENST00000474617 ZBTB21Q9ULJ3 1066 aa24.49■■□□□ 1.51
CCM2-206ENST00000474617 KDM3AQ9Y4C1 1321 aa24.48■■□□□ 1.51
CCM2-206ENST00000474617 TBX3O15119 743 aa24.48■■□□□ 1.51
CCM2-206ENST00000474617 SKILP12757 684 aa24.48■■□□□ 1.51
CCM2-206ENST00000474617 STAT2P52630 851 aa24.48■■□□□ 1.51
CCM2-206ENST00000474617 DNTTIP2Q5QJE6 756 aaKnown RBP24.48■■□□□ 1.51
CCM2-206ENST00000474617 CDKAL1Q5VV42 579 aa24.48■■□□□ 1.51
CCM2-206ENST00000474617 KRT79Q5XKE5 535 aa24.48■■□□□ 1.51
CCM2-206ENST00000474617 CNNM4Q6P4Q7 775 aa24.48■■□□□ 1.51
CCM2-206ENST00000474617 FAM160B2Q86V87 743 aa24.48■■□□□ 1.51
CCM2-206ENST00000474617 SLFN12Q8IYM2 578 aa24.48■■□□□ 1.51
CCM2-206ENST00000474617 NOC3LQ8WTT2 800 aaKnown RBP24.48■■□□□ 1.51
CCM2-206ENST00000474617 MBOAT7Q96N66 472 aa24.48■■□□□ 1.51
CCM2-206ENST00000474617 PIK3CDO00329 1044 aa24.47■■□□□ 1.51
CCM2-206ENST00000474617 TUBB4AP04350 444 aa24.47■■□□□ 1.51
CCM2-206ENST00000474617 PLCG1P19174 1290 aa24.47■■□□□ 1.51
CCM2-206ENST00000474617 TECP42680 631 aa24.47■■□□□ 1.51
CCM2-206ENST00000474617 KCTD17Q8N5Z5 321 aa24.47■■□□□ 1.51
CCM2-206ENST00000474617 CDK5RAP3Q96JB5 506 aa24.47■■□□□ 1.51
CCM2-206ENST00000474617 NAP1L5Q96NT1 182 aaPredicted RBP24.47■■□□□ 1.51
CCM2-206ENST00000474617 CLRN2A0PK11 232 aa24.46■■□□□ 1.51
CCM2-206ENST00000474617 TMEM232C9JQI7 657 aa24.46■■□□□ 1.51
CCM2-206ENST00000474617 RAD21O60216 631 aa24.46■■□□□ 1.51
CCM2-206ENST00000474617 ASNSP08243 561 aa24.46■■□□□ 1.51
CCM2-206ENST00000474617 LRMPQ12912 555 aa24.46■■□□□ 1.51
CCM2-206ENST00000474617 IKQ13123 557 aaPredicted RBP24.46■■□□□ 1.51
CCM2-206ENST00000474617 TPD52L1Q16890 204 aaPredicted RBP24.46■■□□□ 1.51
CCM2-206ENST00000474617 NT5C3AQ9H0P0 336 aa24.46■■□□□ 1.51
CCM2-206ENST00000474617 VEZTQ9HBM0 779 aa24.46■■□□□ 1.51
CCM2-206ENST00000474617 MYOZ2Q9NPC6 264 aa24.46■■□□□ 1.51
CCM2-206ENST00000474617 A0A1B0GTH6 734 aa24.45■■□□□ 1.51
CCM2-206ENST00000474617 H7C1D1 291 aa24.45■■□□□ 1.51
CCM2-206ENST00000474617 KIF2AO00139 706 aaPredicted RBP24.45■■□□□ 1.51
CCM2-206ENST00000474617 TXKP42681 527 aa24.45■■□□□ 1.51
CCM2-206ENST00000474617 SPECC1LQ69YQ0 1117 aa24.45■■□□□ 1.51
CCM2-206ENST00000474617 GIMAP8Q8ND71 665 aaPredicted RBP24.45■■□□□ 1.51
CCM2-206ENST00000474617 DPF2Q92785 391 aa24.45■■□□□ 1.51
CCM2-206ENST00000474617 DHTKD1Q96HY7 919 aaPredicted RBP24.45■■□□□ 1.51
CCM2-206ENST00000474617 ANO3Q9BYT9 981 aa24.45■■□□□ 1.51
CCM2-206ENST00000474617 PVALEFA0A1B0GWK0 134 aa24.45■■□□□ 1.5
CCM2-206ENST00000474617 PSMA7O14818 248 aa24.45■■□□□ 1.5
CCM2-206ENST00000474617 CAP2P40123 477 aa24.45■■□□□ 1.5
CCM2-206ENST00000474617 CCZ1BP86790 482 aa24.45■■□□□ 1.5
CCM2-206ENST00000474617 CCZ1P86791 482 aaPredicted RBP24.45■■□□□ 1.5
CCM2-206ENST00000474617 SV2BQ7L1I2 683 aa24.45■■□□□ 1.5
CCM2-206ENST00000474617 TRIM9Q9C026 710 aa24.45■■□□□ 1.5
CCM2-206ENST00000474617 BLZF1Q9H2G9 400 aa24.45■■□□□ 1.5
CCM2-206ENST00000474617 VCPKMTQ9H867 229 aa24.45■■□□□ 1.5
CCM2-206ENST00000474617 ZBTB12Q9Y330 459 aaPredicted RBP24.45■■□□□ 1.5
CCM2-206ENST00000474617 LRRC10BA6NIK2 292 aa24.44■■□□□ 1.5
CCM2-206ENST00000474617 SPDYE3A6NKU9 549 aa24.44■■□□□ 1.5
CCM2-206ENST00000474617 MARCH6O60337 910 aa24.44■■□□□ 1.5
CCM2-206ENST00000474617 TDP2O95551 362 aa24.44■■□□□ 1.5
CCM2-206ENST00000474617 CD44P16070 742 aaKnown RBP24.44■■□□□ 1.5
CCM2-206ENST00000474617 UBE2SQ16763 222 aa24.44■■□□□ 1.5
CCM2-206ENST00000474617 HYIQ5T013 277 aa24.44■■□□□ 1.5
CCM2-206ENST00000474617 ADSSL1Q8N142 457 aa24.44■■□□□ 1.5
CCM2-206ENST00000474617 HOOK2Q96ED9 719 aa24.44■■□□□ 1.5
CCM2-206ENST00000474617 EHMT1Q9H9B1 1298 aa24.44■■□□□ 1.5
CCM2-206ENST00000474617 PNMA2Q9UL42 364 aa24.44■■□□□ 1.5
CCM2-206ENST00000474617 BICDL2A1A5D9 508 aa24.43■■□□□ 1.5
CCM2-206ENST00000474617 PP2D1A8MPX8 630 aa24.43■■□□□ 1.5
CCM2-206ENST00000474617 WNT10BO00744 389 aa24.43■■□□□ 1.5
CCM2-206ENST00000474617 SLC37A4O43826 429 aa24.43■■□□□ 1.5
CCM2-206ENST00000474617 CDC25AP30304 524 aa24.43■■□□□ 1.5
CCM2-206ENST00000474617 NR1I3Q14994 352 aa24.43■■□□□ 1.5
CCM2-206ENST00000474617 Q4G0T1 1027 aa24.43■■□□□ 1.5
CCM2-206ENST00000474617 FCHSD1Q86WN1 690 aa24.43■■□□□ 1.5
CCM2-206ENST00000474617 MED15Q96RN5 788 aa24.43■■□□□ 1.5
CCM2-206ENST00000474617 MMTAG2Q9BU76 263 aaKnown RBP24.43■■□□□ 1.5
CCM2-206ENST00000474617 EXOC1Q9NV70 894 aa24.43■■□□□ 1.5
CCM2-206ENST00000474617 PGAP2Q9UHJ9 254 aa24.43■■□□□ 1.5
CCM2-206ENST00000474617 FEM1BQ9UK73 627 aa24.43■■□□□ 1.5
CCM2-206ENST00000474617 PRR12Q9ULL5 1215 aa24.43■■□□□ 1.5
CCM2-206ENST00000474617 A0A1W2PRG0 241 aa24.42■■□□□ 1.5
CCM2-206ENST00000474617 PSDA5PKW4 1024 aaPredicted RBP24.42■■□□□ 1.5
CCM2-206ENST00000474617 MEIS2O14770 477 aa24.42■■□□□ 1.5
CCM2-206ENST00000474617 KLRC4O43908 158 aa24.42■■□□□ 1.5
CCM2-206ENST00000474617 ZBTB7AO95365 584 aa24.42■■□□□ 1.5
CCM2-206ENST00000474617 SREBF1P36956 1147 aa24.42■■□□□ 1.5
CCM2-206ENST00000474617 KLHL10Q6JEL2 608 aa24.42■■□□□ 1.5
CCM2-206ENST00000474617 FOXR2Q6PJQ5 311 aa24.42■■□□□ 1.5
CCM2-206ENST00000474617 TRMT44Q8IYL2 757 aaKnown RBP24.42■■□□□ 1.5
CCM2-206ENST00000474617 NELFBQ8WX92 580 aa24.42■■□□□ 1.5
CCM2-206ENST00000474617 CRYGNQ8WXF5 182 aa24.42■■□□□ 1.5
CCM2-206ENST00000474617 LIMA1Q9UHB6 759 aaKnown RBP24.42■■□□□ 1.5
CCM2-206ENST00000474617 PCDHA12Q9UN75 941 aa24.42■■□□□ 1.5
CCM2-206ENST00000474617 EDIL3O43854 480 aa24.41■■□□□ 1.5
CCM2-206ENST00000474617 CIITAP33076 1130 aa24.41■■□□□ 1.5
CCM2-206ENST00000474617 TBX2Q13207 712 aaPredicted RBP24.41■■□□□ 1.5
CCM2-206ENST00000474617 RRP1BQ14684 758 aaKnown RBP24.41■■□□□ 1.5
CCM2-206ENST00000474617 KMT5BQ4FZB7 885 aa24.41■■□□□ 1.5
CCM2-206ENST00000474617 TMEM119Q4V9L6 283 aa24.41■■□□□ 1.5
CCM2-206ENST00000474617 FAM20AQ96MK3 541 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms