RNA–Protein interactions for RNA: ENST00000474430.5

TRIM46-208, Transcript of tripartite motif containing 46, humanhuman

TSL 5

Gene TRIM46, Length 2,704 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-208ENST00000474430 DICER1Q9UPY3 1922 aaKnown RBP18.08■□□□□ 0.49
TRIM46-208ENST00000474430 ZNF18P17022 549 aa18.08■□□□□ 0.48
TRIM46-208ENST00000474430 NONOQ15233 471 aaKnown RBP eCLIP18.08■□□□□ 0.48
TRIM46-208ENST00000474430 SPECC1Q5M775 1068 aa18.08■□□□□ 0.48
TRIM46-208ENST00000474430 FCHSD1Q86WN1 690 aa18.08■□□□□ 0.48
TRIM46-208ENST00000474430 ZNF592Q92610 1267 aa18.08■□□□□ 0.48
TRIM46-208ENST00000474430 MCM7P33993 719 aa18.07■□□□□ 0.48
TRIM46-208ENST00000474430 APOBEC3FQ8IUX4 373 aaKnown RBP18.07■□□□□ 0.48
TRIM46-208ENST00000474430 SMARCE1Q969G3 411 aa18.07■□□□□ 0.48
TRIM46-208ENST00000474430 SYT17Q9BSW7 474 aa18.07■□□□□ 0.48
TRIM46-208ENST00000474430 CSRNP2Q9H175 543 aa18.07■□□□□ 0.48
TRIM46-208ENST00000474430 DEFB129Q9H1M3 183 aa18.07■□□□□ 0.48
TRIM46-208ENST00000474430 L2HGDHQ9H9P8 463 aa18.07■□□□□ 0.48
TRIM46-208ENST00000474430 GINM1Q9NU53 330 aa18.07■□□□□ 0.48
TRIM46-208ENST00000474430 SCAF8Q9UPN6 1271 aaKnown RBP18.07■□□□□ 0.48
TRIM46-208ENST00000474430 ASTN2O75129 1339 aaPredicted RBP18.07■□□□□ 0.48
TRIM46-208ENST00000474430 PPP1R11O60927 126 aaPredicted RBP18.07■□□□□ 0.48
TRIM46-208ENST00000474430 ECE1P42892 770 aa18.07■□□□□ 0.48
TRIM46-208ENST00000474430 IKQ13123 557 aaPredicted RBP18.07■□□□□ 0.48
TRIM46-208ENST00000474430 INF2Q27J81 1249 aa18.07■□□□□ 0.48
TRIM46-208ENST00000474430 SMAP1Q8IYB5 467 aaPredicted RBP18.07■□□□□ 0.48
TRIM46-208ENST00000474430 ACER1Q8TDN7 264 aa18.07■□□□□ 0.48
TRIM46-208ENST00000474430 NUP88Q99567 741 aaPredicted RBP18.07■□□□□ 0.48
TRIM46-208ENST00000474430 FEZ1Q99689 392 aa18.07■□□□□ 0.48
TRIM46-208ENST00000474430 CGNQ9P2M7 1197 aaKnown RBP18.07■□□□□ 0.48
TRIM46-208ENST00000474430 TMEM232C9JQI7 657 aa18.07■□□□□ 0.48
TRIM46-208ENST00000474430 TBX2Q13207 712 aaPredicted RBP18.07■□□□□ 0.48
TRIM46-208ENST00000474430 CDC37Q16543 378 aaPredicted RBP18.07■□□□□ 0.48
TRIM46-208ENST00000474430 QRICH1Q2TAL8 776 aa18.07■□□□□ 0.48
TRIM46-208ENST00000474430 SYDE2Q5VT97 1194 aa18.07■□□□□ 0.48
TRIM46-208ENST00000474430 BTNL9Q6UXG8 535 aa18.07■□□□□ 0.48
TRIM46-208ENST00000474430 ERO1AQ96HE7 468 aa18.07■□□□□ 0.48
TRIM46-208ENST00000474430 GLT8D2Q9H1C3 349 aa18.07■□□□□ 0.48
TRIM46-208ENST00000474430 RIC8AQ9NPQ8 531 aa18.07■□□□□ 0.48
TRIM46-208ENST00000474430 ERCC5P28715 1186 aaPredicted RBP18.06■□□□□ 0.48
TRIM46-208ENST00000474430 ARL6IP4Q66PJ3 421 aaKnown RBP18.06■□□□□ 0.48
TRIM46-208ENST00000474430 CCDC34Q96HJ3 373 aa18.06■□□□□ 0.48
TRIM46-208ENST00000474430 PHF20L1A8MW92 1017 aa18.06■□□□□ 0.48
TRIM46-208ENST00000474430 SH3RF1Q7Z6J0 888 aa18.06■□□□□ 0.48
TRIM46-208ENST00000474430 HOOK2Q96ED9 719 aa18.06■□□□□ 0.48
TRIM46-208ENST00000474430 BIN2Q9UBW5 565 aaPredicted RBP18.06■□□□□ 0.48
TRIM46-208ENST00000474430 PRR29P0C7W0 189 aa18.05■□□□□ 0.48
TRIM46-208ENST00000474430 MRPL12P52815 198 aaKnown RBP18.05■□□□□ 0.48
TRIM46-208ENST00000474430 CUL5Q93034 780 aa18.05■□□□□ 0.48
TRIM46-208ENST00000474430 VCPKMTQ9H867 229 aa18.05■□□□□ 0.48
TRIM46-208ENST00000474430 INTS13Q9NVM9 706 aa18.05■□□□□ 0.48
TRIM46-208ENST00000474430 JAKMIP3Q5VZ66 844 aa18.05■□□□□ 0.48
TRIM46-208ENST00000474430 DCAF15Q66K64 600 aa18.05■□□□□ 0.48
TRIM46-208ENST00000474430 SPICE1Q8N0Z3 855 aa18.05■□□□□ 0.48
TRIM46-208ENST00000474430 TRPM4Q8TD43 1214 aa18.05■□□□□ 0.48
TRIM46-208ENST00000474430 ANGEL2Q5VTE6 544 aaKnown RBP18.04■□□□□ 0.48
TRIM46-208ENST00000474430 NEK8Q86SG6 692 aa18.04■□□□□ 0.48
TRIM46-208ENST00000474430 ZNF215Q9UL58 517 aaPredicted RBP18.04■□□□□ 0.48
TRIM46-208ENST00000474430 LAD1O00515 517 aa18.04■□□□□ 0.48
TRIM46-208ENST00000474430 SLU7O95391 586 aaKnown RBP18.04■□□□□ 0.48
TRIM46-208ENST00000474430 SLFN14P0C7P3 912 aa18.04■□□□□ 0.48
TRIM46-208ENST00000474430 FMR1Q06787 632 aaKnown RBP eCLIP18.04■□□□□ 0.48
TRIM46-208ENST00000474430 ORC2Q13416 577 aaPredicted RBP18.04■□□□□ 0.48
TRIM46-208ENST00000474430 C4orf32Q8N8J7 132 aa18.04■□□□□ 0.48
TRIM46-208ENST00000474430 AMNQ9BXJ7 453 aa18.04■□□□□ 0.48
TRIM46-208ENST00000474430 RNF181Q9P0P0 153 aa18.04■□□□□ 0.48
TRIM46-208ENST00000474430 PCDHA1Q9Y5I3 950 aa18.04■□□□□ 0.48
TRIM46-208ENST00000474430 SBF1O95248 1867 aa18.04■□□□□ 0.48
TRIM46-208ENST00000474430 VWA3AA6NCI4 1184 aa18.03■□□□□ 0.48
TRIM46-208ENST00000474430 CTNND1O60716 968 aaKnown RBP18.03■□□□□ 0.48
TRIM46-208ENST00000474430 STAT2P52630 851 aa18.03■□□□□ 0.48
TRIM46-208ENST00000474430 USP49Q70CQ1 688 aa18.03■□□□□ 0.48
TRIM46-208ENST00000474430 RNF216Q9NWF9 866 aaPredicted RBP18.03■□□□□ 0.48
TRIM46-208ENST00000474430 NFE2L3Q9Y4A8 694 aa18.03■□□□□ 0.48
TRIM46-208ENST00000474430 TMEM139Q8IV31 216 aa18.03■□□□□ 0.48
TRIM46-208ENST00000474430 TBCKQ8TEA7 893 aa18.03■□□□□ 0.48
TRIM46-208ENST00000474430 MED15Q96RN5 788 aa18.03■□□□□ 0.48
TRIM46-208ENST00000474430 PSTPIP2Q9H939 334 aa18.03■□□□□ 0.48
TRIM46-208ENST00000474430 TMEM260Q9NX78 707 aa18.03■□□□□ 0.48
TRIM46-208ENST00000474430 EPS15P42566 896 aa18.02■□□□□ 0.48
TRIM46-208ENST00000474430 FAM83BQ5T0W9 1011 aa18.02■□□□□ 0.48
TRIM46-208ENST00000474430 NBPF12Q5TAG4 269 aaPredicted RBP18.02■□□□□ 0.48
TRIM46-208ENST00000474430 FBXO11Q86XK2 927 aa18.02■□□□□ 0.48
TRIM46-208ENST00000474430 CHURC1Q8WUH1 139 aa18.02■□□□□ 0.48
TRIM46-208ENST00000474430 ZNF341Q9BYN7 854 aa18.02■□□□□ 0.48
TRIM46-208ENST00000474430 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.02■□□□□ 0.48
TRIM46-208ENST00000474430 PPP2R3BQ9Y5P8 575 aa18.02■□□□□ 0.48
TRIM46-208ENST00000474430 PHLPP2Q6ZVD8 1323 aa18.02■□□□□ 0.48
TRIM46-208ENST00000474430 ARHGAP6O43182 974 aa18.02■□□□□ 0.48
TRIM46-208ENST00000474430 LONP1P36776 959 aaKnown RBP18.02■□□□□ 0.48
TRIM46-208ENST00000474430 ETF1P62495 437 aaKnown RBP18.02■□□□□ 0.48
TRIM46-208ENST00000474430 TRAF1Q13077 416 aa18.02■□□□□ 0.48
TRIM46-208ENST00000474430 LETM2Q2VYF4 491 aa18.02■□□□□ 0.48
TRIM46-208ENST00000474430 KIAA1755Q5JYT7 1200 aa18.02■□□□□ 0.48
TRIM46-208ENST00000474430 GGA3Q9NZ52 723 aa18.02■□□□□ 0.48
TRIM46-208ENST00000474430 PRR12Q9ULL5 1215 aa18.02■□□□□ 0.48
TRIM46-208ENST00000474430 CCNT1O60563 726 aaKnown RBP18.01■□□□□ 0.47
TRIM46-208ENST00000474430 CLK2P49760 499 aaKnown RBP18.01■□□□□ 0.47
TRIM46-208ENST00000474430 NAA30Q147X3 362 aaPredicted RBP18.01■□□□□ 0.47
TRIM46-208ENST00000474430 FAM160B2Q86V87 743 aa18.01■□□□□ 0.47
TRIM46-208ENST00000474430 SYMPKQ92797 1274 aaKnown RBP18.01■□□□□ 0.47
TRIM46-208ENST00000474430 PLA2G6O60733 806 aa18.01■□□□□ 0.47
TRIM46-208ENST00000474430 YBX3P16989 372 aaKnown RBP eCLIP18.01■□□□□ 0.47
TRIM46-208ENST00000474430 PRPHP41219 470 aa18.01■□□□□ 0.47
TRIM46-208ENST00000474430 ZYXQ15942 572 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms