RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 PCDHA11Q9Y5I1 949 aa15□□□□□ -0.01
TRAF4-209ENST00000473421 NFIBO00712 420 aa14.99□□□□□ -0.01
TRAF4-209ENST00000473421 PURAQ00577 322 aaKnown RBP14.99□□□□□ -0.01
TRAF4-209ENST00000473421 BAATQ14032 418 aaPredicted RBP14.99□□□□□ -0.01
TRAF4-209ENST00000473421 RCSD1Q6JBY9 416 aa14.99□□□□□ -0.01
TRAF4-209ENST00000473421 TMCO2Q7Z6W1 182 aaPredicted RBP14.99□□□□□ -0.01
TRAF4-209ENST00000473421 FAM160B2Q86V87 743 aa14.99□□□□□ -0.01
TRAF4-209ENST00000473421 CHURC1Q8WUH1 139 aa14.99□□□□□ -0.01
TRAF4-209ENST00000473421 COPS5Q92905 334 aa14.99□□□□□ -0.01
TRAF4-209ENST00000473421 TNKSO95271 1327 aa14.98□□□□□ -0.01
TRAF4-209ENST00000473421 GNAT2P19087 354 aa14.98□□□□□ -0.01
TRAF4-209ENST00000473421 PLA2G5P39877 138 aa14.98□□□□□ -0.01
TRAF4-209ENST00000473421 GPNMBQ14956 572 aa14.98□□□□□ -0.01
TRAF4-209ENST00000473421 TKFCQ3LXA3 575 aa14.98□□□□□ -0.01
TRAF4-209ENST00000473421 DUSP28Q4G0W2 176 aa14.98□□□□□ -0.01
TRAF4-209ENST00000473421 WDR11Q9BZH6 1224 aa14.98□□□□□ -0.01
TRAF4-209ENST00000473421 MTIF3Q9H2K0 278 aaKnown RBP14.98□□□□□ -0.01
TRAF4-209ENST00000473421 DCTPP1Q9H773 170 aa14.98□□□□□ -0.01
TRAF4-209ENST00000473421 CCPG1Q9ULG6 757 aa14.98□□□□□ -0.01
TRAF4-209ENST00000473421 STX8Q9UNK0 236 aa14.98□□□□□ -0.01
TRAF4-209ENST00000473421 Q9Y3F1 56 aa14.98□□□□□ -0.01
TRAF4-209ENST00000473421 PTPRSQ13332 1948 aa14.98□□□□□ -0.01
TRAF4-209ENST00000473421 PLA2G6O60733 806 aa14.97□□□□□ -0.01
TRAF4-209ENST00000473421 MYL3P08590 195 aa14.97□□□□□ -0.01
TRAF4-209ENST00000473421 FDX1P10109 184 aa14.97□□□□□ -0.01
TRAF4-209ENST00000473421 MS4A1P11836 297 aa14.97□□□□□ -0.01
TRAF4-209ENST00000473421 ALDH5A1P51649 535 aaPredicted RBP14.97□□□□□ -0.01
TRAF4-209ENST00000473421 TAP1Q03518 808 aa14.97□□□□□ -0.01
TRAF4-209ENST00000473421 SKIV2LQ15477 1246 aaKnown RBP14.97□□□□□ -0.01
TRAF4-209ENST00000473421 NBPF20Q3BBV1 942 aa14.97□□□□□ -0.01
TRAF4-209ENST00000473421 ZMYM1Q5SVZ6 1142 aa14.97□□□□□ -0.01
TRAF4-209ENST00000473421 VPS53Q5VIR6 699 aa14.97□□□□□ -0.01
TRAF4-209ENST00000473421 SLC30A10Q6XR72 485 aa14.97□□□□□ -0.01
TRAF4-209ENST00000473421 RPUSD2Q8IZ73 545 aaKnown RBP14.97□□□□□ -0.01
TRAF4-209ENST00000473421 PI4K2BQ8TCG2 481 aa14.97□□□□□ -0.01
TRAF4-209ENST00000473421 VTA1Q9NP79 307 aa14.97□□□□□ -0.01
TRAF4-209ENST00000473421 SCN10AQ9Y5Y9 1956 aa14.96□□□□□ -0.01
TRAF4-209ENST00000473421 ERC2O15083 957 aa14.96□□□□□ -0.01
TRAF4-209ENST00000473421 ZEB2O60315 1214 aa14.96□□□□□ -0.01
TRAF4-209ENST00000473421 LPXNO60711 386 aa14.96□□□□□ -0.01
TRAF4-209ENST00000473421 ZFYP08048 801 aaPredicted RBP14.96□□□□□ -0.01
TRAF4-209ENST00000473421 NOVP48745 357 aa14.96□□□□□ -0.01
TRAF4-209ENST00000473421 PDE4BQ07343 736 aa14.96□□□□□ -0.01
TRAF4-209ENST00000473421 TCTN1Q2MV58 587 aa14.96□□□□□ -0.01
TRAF4-209ENST00000473421 TMEM67Q5HYA8 995 aa14.96□□□□□ -0.01
TRAF4-209ENST00000473421 CLEC4DQ8WXI8 215 aa14.96□□□□□ -0.01
TRAF4-209ENST00000473421 CTAGE1Q96RT6 745 aa14.96□□□□□ -0.01
TRAF4-209ENST00000473421 NAPBQ9H115 298 aa14.96□□□□□ -0.01
TRAF4-209ENST00000473421 RANBP17Q9H2T7 1088 aaKnown RBP14.96□□□□□ -0.01
TRAF4-209ENST00000473421 ZNF287Q9HBT7 754 aa14.96□□□□□ -0.01
TRAF4-209ENST00000473421 CD320Q9NPF0 282 aa14.96□□□□□ -0.01
TRAF4-209ENST00000473421 FRMPD2Q68DX3 1309 aaPredicted RBP14.95□□□□□ -0.02
TRAF4-209ENST00000473421 RBM47A0AV96 593 aaKnown RBP14.95□□□□□ -0.02
TRAF4-209ENST00000473421 LCHNA4D1U4 455 aa14.95□□□□□ -0.02
TRAF4-209ENST00000473421 TLL1O43897 1013 aa14.95□□□□□ -0.02
TRAF4-209ENST00000473421 ICAM1P05362 532 aa14.95□□□□□ -0.02
TRAF4-209ENST00000473421 IQCF3P0C7M6 154 aa14.95□□□□□ -0.02
TRAF4-209ENST00000473421 POU3F3P20264 500 aaPredicted RBP14.95□□□□□ -0.02
TRAF4-209ENST00000473421 IL27Q8NEV9 243 aa14.95□□□□□ -0.02
TRAF4-209ENST00000473421 ARNTL2Q8WYA1 636 aa14.95□□□□□ -0.02
TRAF4-209ENST00000473421 GPCPD1Q9NPB8 672 aa14.95□□□□□ -0.02
TRAF4-209ENST00000473421 TRIP12Q14669 1992 aaPredicted RBP14.94□□□□□ -0.02
TRAF4-209ENST00000473421 TSPY2A6NKD2 308 aa14.94□□□□□ -0.02
TRAF4-209ENST00000473421 ARIH2O95376 493 aa14.94□□□□□ -0.02
TRAF4-209ENST00000473421 GRB10Q13322 594 aa14.94□□□□□ -0.02
TRAF4-209ENST00000473421 CCDC96Q2M329 555 aa14.94□□□□□ -0.02
TRAF4-209ENST00000473421 FAM47CQ5HY64 1035 aa14.94□□□□□ -0.02
TRAF4-209ENST00000473421 OR6J1Q8NGC5 347 aa14.94□□□□□ -0.02
TRAF4-209ENST00000473421 LRFN3Q9BTN0 628 aa14.94□□□□□ -0.02
TRAF4-209ENST00000473421 C11orf16Q9NQ32 467 aa14.94□□□□□ -0.02
TRAF4-209ENST00000473421 RCAN3Q9UKA8 241 aa14.94□□□□□ -0.02
TRAF4-209ENST00000473421 BRWD1Q9NSI6 2320 aa14.93□□□□□ -0.02
TRAF4-209ENST00000473421 PTPDC1A2A3K4 754 aa14.93□□□□□ -0.02
TRAF4-209ENST00000473421 RANBP6O60518 1105 aaKnown RBP14.93□□□□□ -0.02
TRAF4-209ENST00000473421 CALML3P27482 149 aa14.93□□□□□ -0.02
TRAF4-209ENST00000473421 BTNL9Q6UXG8 535 aa14.93□□□□□ -0.02
TRAF4-209ENST00000473421 HERC6Q8IVU3 1022 aa14.93□□□□□ -0.02
TRAF4-209ENST00000473421 FAM122AQ96E09 287 aa14.93□□□□□ -0.02
TRAF4-209ENST00000473421 MTG1Q9BT17 334 aaPredicted RBP14.93□□□□□ -0.02
TRAF4-209ENST00000473421 NACAP1Q9BZK3 213 aa14.93□□□□□ -0.02
TRAF4-209ENST00000473421 CPVLQ9H3G5 476 aa14.93□□□□□ -0.02
TRAF4-209ENST00000473421 CHMP4BP1P59074 171 aa14.92□□□□□ -0.02
TRAF4-209ENST00000473421 SYDE2Q5VT97 1194 aa14.92□□□□□ -0.02
TRAF4-209ENST00000473421 TBC1D5Q92609 795 aa14.92□□□□□ -0.02
TRAF4-209ENST00000473421 DHX38Q92620 1227 aaKnown RBP14.92□□□□□ -0.02
TRAF4-209ENST00000473421 TMEM47Q9BQJ4 181 aa14.92□□□□□ -0.02
TRAF4-209ENST00000473421 FSD1Q9BTV5 496 aa14.92□□□□□ -0.02
TRAF4-209ENST00000473421 SEZ6LQ9BYH1 1024 aa14.92□□□□□ -0.02
TRAF4-209ENST00000473421 TSPYL2Q9H2G4 693 aaPredicted RBP14.92□□□□□ -0.02
TRAF4-209ENST00000473421 POLR3EQ9NVU0 708 aa14.92□□□□□ -0.02
TRAF4-209ENST00000473421 PCDHB15Q9Y5E8 787 aa14.92□□□□□ -0.02
TRAF4-209ENST00000473421 TANC1Q9C0D5 1861 aa14.91□□□□□ -0.02
TRAF4-209ENST00000473421 COL4A4P53420 1690 aaPredicted RBP14.91□□□□□ -0.02
TRAF4-209ENST00000473421 FAM86C2PA6NEL3 165 aa14.91□□□□□ -0.02
TRAF4-209ENST00000473421 A6NJR5 290 aa14.91□□□□□ -0.02
TRAF4-209ENST00000473421 PFKMP08237 780 aa14.91□□□□□ -0.02
TRAF4-209ENST00000473421 SUPT20HL2P0C7V6 817 aa14.91□□□□□ -0.02
TRAF4-209ENST00000473421 EDNRBP24530 442 aa14.91□□□□□ -0.02
TRAF4-209ENST00000473421 HOXD11P31277 338 aaPredicted RBP14.91□□□□□ -0.02
TRAF4-209ENST00000473421 RPS6P62753 249 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms