RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 CLEC4DQ8WXI8 215 aa15.9■□□□□ 0.14
CHD3-209ENST00000473376 FAM161BQ96MY7 647 aa15.9■□□□□ 0.14
CHD3-209ENST00000473376 DSCC1Q9BVC3 393 aa15.9■□□□□ 0.14
CHD3-209ENST00000473376 LNPKQ9C0E8 428 aa15.9■□□□□ 0.14
CHD3-209ENST00000473376 IL23AQ9NPF7 189 aa15.9■□□□□ 0.14
CHD3-209ENST00000473376 CTNNA3Q9UI47 895 aa15.9■□□□□ 0.14
CHD3-209ENST00000473376 GRIN2DO15399 1336 aa15.9■□□□□ 0.14
CHD3-209ENST00000473376 NFIBO00712 420 aa15.89■□□□□ 0.13
CHD3-209ENST00000473376 PFKMP08237 780 aa15.89■□□□□ 0.13
CHD3-209ENST00000473376 CSF2RAP15509 400 aa15.89■□□□□ 0.13
CHD3-209ENST00000473376 SLC16A2P36021 539 aa15.89■□□□□ 0.13
CHD3-209ENST00000473376 IRX5P78411 483 aaPredicted RBP15.89■□□□□ 0.13
CHD3-209ENST00000473376 BEX3Q00994 111 aa15.89■□□□□ 0.13
CHD3-209ENST00000473376 RNF207Q6ZRF8 634 aa15.89■□□□□ 0.13
CHD3-209ENST00000473376 FBXO16Q8IX29 292 aaPredicted RBP15.89■□□□□ 0.13
CHD3-209ENST00000473376 RPUSD2Q8IZ73 545 aaKnown RBP15.89■□□□□ 0.13
CHD3-209ENST00000473376 MAFAQ8NHW3 353 aaPredicted RBP15.89■□□□□ 0.13
CHD3-209ENST00000473376 SCFD2Q8WU76 684 aa15.89■□□□□ 0.13
CHD3-209ENST00000473376 RILPL2Q969X0 211 aa15.89■□□□□ 0.13
CHD3-209ENST00000473376 WDR11Q9BZH6 1224 aa15.89■□□□□ 0.13
CHD3-209ENST00000473376 HIPK3Q9H422 1215 aa15.89■□□□□ 0.13
CHD3-209ENST00000473376 PDGFCQ9NRA1 345 aa15.89■□□□□ 0.13
CHD3-209ENST00000473376 MCM3APO60318 1980 aa15.89■□□□□ 0.13
CHD3-209ENST00000473376 RAD50Q92878 1312 aa15.89■□□□□ 0.13
CHD3-209ENST00000473376 SNAP25P60880 206 aa15.88■□□□□ 0.13
CHD3-209ENST00000473376 RPS6P62753 249 aaKnown RBP15.88■□□□□ 0.13
CHD3-209ENST00000473376 PTPN11Q06124 597 aaPredicted RBP15.88■□□□□ 0.13
CHD3-209ENST00000473376 TIFAQ96CG3 184 aa15.88■□□□□ 0.13
CHD3-209ENST00000473376 ZNF576Q9H609 170 aa15.88■□□□□ 0.13
CHD3-209ENST00000473376 GPCPD1Q9NPB8 672 aa15.88■□□□□ 0.13
CHD3-209ENST00000473376 PTPDC1A2A3K4 754 aa15.87■□□□□ 0.13
CHD3-209ENST00000473376 A6NJR5 290 aa15.87■□□□□ 0.13
CHD3-209ENST00000473376 FGBP02675 491 aa15.87■□□□□ 0.13
CHD3-209ENST00000473376 FOSL2P15408 326 aa15.87■□□□□ 0.13
CHD3-209ENST00000473376 HAND2P61296 217 aa15.87■□□□□ 0.13
CHD3-209ENST00000473376 PURAQ00577 322 aaKnown RBP15.87■□□□□ 0.13
CHD3-209ENST00000473376 RAB30Q15771 203 aa15.87■□□□□ 0.13
CHD3-209ENST00000473376 ASPRV1Q53RT3 343 aa15.87■□□□□ 0.13
CHD3-209ENST00000473376 NFRKBQ6P4R8 1299 aa15.87■□□□□ 0.13
CHD3-209ENST00000473376 ZNF365Q70YC5 407 aa15.87■□□□□ 0.13
CHD3-209ENST00000473376 EEPD1Q7L9B9 569 aa15.87■□□□□ 0.13
CHD3-209ENST00000473376 RASGRP2Q7LDG7 609 aa15.87■□□□□ 0.13
CHD3-209ENST00000473376 TBC1D10CQ8IV04 446 aa15.87■□□□□ 0.13
CHD3-209ENST00000473376 SAMD3Q8N6K7 520 aa15.87■□□□□ 0.13
CHD3-209ENST00000473376 NOC4LQ9BVI4 516 aaKnown RBP15.87■□□□□ 0.13
CHD3-209ENST00000473376 ALDH8A1Q9H2A2 487 aaPredicted RBP15.87■□□□□ 0.13
CHD3-209ENST00000473376 CNNM2Q9H8M5 875 aa15.87■□□□□ 0.13
CHD3-209ENST00000473376 FRMPD2Q68DX3 1309 aaPredicted RBP15.87■□□□□ 0.13
CHD3-209ENST00000473376 LRRC37A2A6NM11 1700 aa15.86■□□□□ 0.13
CHD3-209ENST00000473376 B4GALT4O60513 344 aa15.86■□□□□ 0.13
CHD3-209ENST00000473376 PDE4DQ08499 809 aa15.86■□□□□ 0.13
CHD3-209ENST00000473376 IMMTQ16891 758 aaKnown RBP15.86■□□□□ 0.13
CHD3-209ENST00000473376 MCF2L2Q86YR7 1114 aa15.86■□□□□ 0.13
CHD3-209ENST00000473376 PNMA1Q8ND90 353 aa15.86■□□□□ 0.13
CHD3-209ENST00000473376 MYLIPQ8WY64 445 aa15.86■□□□□ 0.13
CHD3-209ENST00000473376 IWS1Q96ST2 819 aa15.86■□□□□ 0.13
CHD3-209ENST00000473376 MTG1Q9BT17 334 aaPredicted RBP15.86■□□□□ 0.13
CHD3-209ENST00000473376 KRT23Q9C075 422 aa15.86■□□□□ 0.13
CHD3-209ENST00000473376 GPHNQ9NQX3 736 aaPredicted RBP15.86■□□□□ 0.13
CHD3-209ENST00000473376 DIAPH3Q9NSV4 1193 aa15.86■□□□□ 0.13
CHD3-209ENST00000473376 MAP3K20Q9NYL2 800 aaKnown RBP15.86■□□□□ 0.13
CHD3-209ENST00000473376 MTMR7Q9Y216 660 aa15.86■□□□□ 0.13
CHD3-209ENST00000473376 ABCB11O95342 1321 aa15.86■□□□□ 0.13
CHD3-209ENST00000473376 CYP2C18P33260 490 aa15.85■□□□□ 0.13
CHD3-209ENST00000473376 RFC2P35250 354 aa15.85■□□□□ 0.13
CHD3-209ENST00000473376 GRIN2CQ14957 1233 aa15.85■□□□□ 0.13
CHD3-209ENST00000473376 PPP2R5BQ15173 497 aa15.85■□□□□ 0.13
CHD3-209ENST00000473376 SYMPKQ92797 1274 aaKnown RBP15.85■□□□□ 0.13
CHD3-209ENST00000473376 PURBQ96QR8 312 aaKnown RBP15.85■□□□□ 0.13
CHD3-209ENST00000473376 ZSCAN10Q96SZ4 725 aaPredicted RBP15.85■□□□□ 0.13
CHD3-209ENST00000473376 COL25A1Q9BXS0 654 aaPredicted RBP15.85■□□□□ 0.13
CHD3-209ENST00000473376 PBX4Q9BYU1 374 aa15.85■□□□□ 0.13
CHD3-209ENST00000473376 PPP1R12CQ9BZL4 782 aa15.85■□□□□ 0.13
CHD3-209ENST00000473376 KAT14Q9H8E8 782 aa15.85■□□□□ 0.13
CHD3-209ENST00000473376 MSRAQ9UJ68 235 aa15.85■□□□□ 0.13
CHD3-209ENST00000473376 UNC80Q8N2C7 3258 aa15.85■□□□□ 0.13
CHD3-209ENST00000473376 PITPNM1O00562 1244 aa15.84■□□□□ 0.13
CHD3-209ENST00000473376 CALML3P27482 149 aa15.84■□□□□ 0.13
CHD3-209ENST00000473376 GHRHRQ02643 423 aa15.84■□□□□ 0.13
CHD3-209ENST00000473376 TRAF1Q13077 416 aa15.84■□□□□ 0.13
CHD3-209ENST00000473376 TTLL4Q14679 1199 aa15.84■□□□□ 0.13
CHD3-209ENST00000473376 CWC27Q6UX04 472 aaKnown RBP15.84■□□□□ 0.13
CHD3-209ENST00000473376 SLC30A10Q6XR72 485 aa15.84■□□□□ 0.13
CHD3-209ENST00000473376 OR6J1Q8NGC5 347 aa15.84■□□□□ 0.13
CHD3-209ENST00000473376 NSUN6Q8TEA1 469 aaKnown RBP15.84■□□□□ 0.13
CHD3-209ENST00000473376 CHMP4CQ96CF2 233 aa15.84■□□□□ 0.13
CHD3-209ENST00000473376 TRPV6Q9H1D0 765 aa15.84■□□□□ 0.13
CHD3-209ENST00000473376 ZSWIM5Q9P217 1185 aa15.84■□□□□ 0.13
CHD3-209ENST00000473376 NEDD4P46934 1319 aa15.84■□□□□ 0.13
CHD3-209ENST00000473376 KDM4AO75164 1064 aa15.83■□□□□ 0.12
CHD3-209ENST00000473376 IGHDP01880 384 aa15.83■□□□□ 0.12
CHD3-209ENST00000473376 B4GALNT3Q6L9W6 998 aa15.83■□□□□ 0.12
CHD3-209ENST00000473376 SESTD1Q86VW0 696 aa15.83■□□□□ 0.12
CHD3-209ENST00000473376 ENAHQ8N8S7 591 aaPredicted RBP15.83■□□□□ 0.12
CHD3-209ENST00000473376 MRPL11Q9Y3B7 192 aaKnown RBP15.83■□□□□ 0.12
CHD3-209ENST00000473376 TNKSO95271 1327 aa15.83■□□□□ 0.12
CHD3-209ENST00000473376 LCTP09848 1927 aa15.82■□□□□ 0.12
CHD3-209ENST00000473376 PARP1P09874 1014 aaKnown RBP15.82■□□□□ 0.12
CHD3-209ENST00000473376 ACRP10323 421 aa15.82■□□□□ 0.12
CHD3-209ENST00000473376 TXNP10599 105 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms