RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 ADORA2AP29274 412 aa7.52□□□□□ -1.21
HDAC1-205ENST00000472928 HSPA4P34932 840 aa7.52□□□□□ -1.21
HDAC1-205ENST00000472928 SOX11P35716 441 aa7.52□□□□□ -1.21
HDAC1-205ENST00000472928 MRPS5P82675 430 aaKnown RBP7.52□□□□□ -1.21
HDAC1-205ENST00000472928 FPGSQ05932 587 aa7.52□□□□□ -1.21
HDAC1-205ENST00000472928 RABEP1Q15276 862 aa7.52□□□□□ -1.21
HDAC1-205ENST00000472928 UBE3CQ15386 1083 aa7.52□□□□□ -1.21
HDAC1-205ENST00000472928 ZYXQ15942 572 aaKnown RBP7.52□□□□□ -1.21
HDAC1-205ENST00000472928 PRAMEF19Q5SWL8 479 aa7.52□□□□□ -1.21
HDAC1-205ENST00000472928 RASIP1Q5U651 963 aa7.52□□□□□ -1.21
HDAC1-205ENST00000472928 ADGRA1Q86SQ6 560 aa7.52□□□□□ -1.21
HDAC1-205ENST00000472928 FOXP4Q8IVH2 680 aaPredicted RBP7.52□□□□□ -1.21
HDAC1-205ENST00000472928 PNMA1Q8ND90 353 aa7.52□□□□□ -1.21
HDAC1-205ENST00000472928 ACER1Q8TDN7 264 aa7.52□□□□□ -1.21
HDAC1-205ENST00000472928 KIF2CQ99661 725 aa7.52□□□□□ -1.21
HDAC1-205ENST00000472928 KRTAP3-3Q9BYR6 98 aa7.52□□□□□ -1.21
HDAC1-205ENST00000472928 KRTAP3-2Q9BYR7 98 aa7.52□□□□□ -1.21
HDAC1-205ENST00000472928 PRDM12Q9H4Q4 367 aa7.52□□□□□ -1.21
HDAC1-205ENST00000472928 AATFQ9NY61 560 aaKnown RBP eCLIP7.52□□□□□ -1.21
HDAC1-205ENST00000472928 TACC3Q9Y6A5 838 aa7.52□□□□□ -1.21
HDAC1-205ENST00000472928 IVNS1ABPQ9Y6Y0 642 aa7.52□□□□□ -1.21
HDAC1-205ENST00000472928 GRXCR1A8MXD5 290 aa7.51□□□□□ -1.21
HDAC1-205ENST00000472928 PQBP1O60828 265 aaKnown RBP7.51□□□□□ -1.21
HDAC1-205ENST00000472928 RAG1P15918 1043 aa7.51□□□□□ -1.21
HDAC1-205ENST00000472928 CYP7A1P22680 504 aa7.51□□□□□ -1.21
HDAC1-205ENST00000472928 ANAPC15P60006 121 aa7.51□□□□□ -1.21
HDAC1-205ENST00000472928 BECN1Q14457 450 aa7.51□□□□□ -1.21
HDAC1-205ENST00000472928 PTPRNQ16849 979 aa7.51□□□□□ -1.21
HDAC1-205ENST00000472928 VPS53Q5VIR6 699 aa7.51□□□□□ -1.21
HDAC1-205ENST00000472928 CREB3L3Q68CJ9 461 aa7.51□□□□□ -1.21
HDAC1-205ENST00000472928 NAA16Q6N069 864 aaPredicted RBP7.51□□□□□ -1.21
HDAC1-205ENST00000472928 THSD4Q6ZMP0 1018 aa7.51□□□□□ -1.21
HDAC1-205ENST00000472928 C16orf59Q7L2K0 433 aa7.51□□□□□ -1.21
HDAC1-205ENST00000472928 HSCBQ8IWL3 235 aa7.51□□□□□ -1.21
HDAC1-205ENST00000472928 CRACR2BQ8N4Y2 399 aaPredicted RBP7.51□□□□□ -1.21
HDAC1-205ENST00000472928 MIGA1Q8NAN2 632 aa7.51□□□□□ -1.21
HDAC1-205ENST00000472928 TGFBRAP1Q8WUH2 860 aa7.51□□□□□ -1.21
HDAC1-205ENST00000472928 GAS2L1Q99501 681 aaPredicted RBP7.51□□□□□ -1.21
HDAC1-205ENST00000472928 FEZ1Q99689 392 aa7.51□□□□□ -1.21
HDAC1-205ENST00000472928 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.51□□□□□ -1.214e-10■□□□□ 9.9
HDAC1-205ENST00000472928 DSCC1Q9BVC3 393 aa7.51□□□□□ -1.21
HDAC1-205ENST00000472928 MOV10L1Q9BXT6 1211 aaKnown RBP7.51□□□□□ -1.21
HDAC1-205ENST00000472928 PBX4Q9BYU1 374 aa7.51□□□□□ -1.21
HDAC1-205ENST00000472928 KIAA1683Q9H0B3 1180 aa7.51□□□□□ -1.21
HDAC1-205ENST00000472928 PUS7LQ9H0K6 701 aaKnown RBP7.51□□□□□ -1.21
HDAC1-205ENST00000472928 SAP30BPQ9UHR5 308 aaKnown RBP7.51□□□□□ -1.21
HDAC1-205ENST00000472928 SNX14Q9Y5W7 946 aa7.51□□□□□ -1.21
HDAC1-205ENST00000472928 ROBO3Q96MS0 1386 aa7.5□□□□□ -1.21
HDAC1-205ENST00000472928 A0A1W2PQ45 241 aaPredicted RBP7.5□□□□□ -1.21
HDAC1-205ENST00000472928 A0A1W2PQY0 241 aa7.5□□□□□ -1.21
HDAC1-205ENST00000472928 SLC27A2O14975 620 aa7.5□□□□□ -1.21
HDAC1-205ENST00000472928 HSPD1P10809 573 aaKnown RBP7.5□□□□□ -1.21
HDAC1-205ENST00000472928 BMP1P13497 986 aa7.5□□□□□ -1.21
HDAC1-205ENST00000472928 ERCC3P19447 782 aa7.5□□□□□ -1.21
HDAC1-205ENST00000472928 FAAP100Q0VG06 881 aa7.5□□□□□ -1.21
HDAC1-205ENST00000472928 CCDC85BQ15834 202 aaPredicted RBP7.5□□□□□ -1.21
HDAC1-205ENST00000472928 MSS51Q4VC12 460 aa7.5□□□□□ -1.21
HDAC1-205ENST00000472928 RNF20Q5VTR2 975 aa7.5□□□□□ -1.21
HDAC1-205ENST00000472928 TATDN1Q6P1N9 297 aa7.5□□□□□ -1.21
HDAC1-205ENST00000472928 ANKRD33Q7Z3H0 272 aa7.5□□□□□ -1.21
HDAC1-205ENST00000472928 DPP9Q86TI2 863 aa7.5□□□□□ -1.21
HDAC1-205ENST00000472928 LCORLQ8N3X6 602 aa7.5□□□□□ -1.21
HDAC1-205ENST00000472928 RETREG2Q8NC44 543 aa7.5□□□□□ -1.21
HDAC1-205ENST00000472928 MAP4K1Q92918 833 aa7.5□□□□□ -1.21
HDAC1-205ENST00000472928 TOX2Q96NM4 488 aa7.5□□□□□ -1.21
HDAC1-205ENST00000472928 UCN2Q96RP3 112 aa7.5□□□□□ -1.21
HDAC1-205ENST00000472928 TRAIPQ9BWF2 469 aa7.5□□□□□ -1.21
HDAC1-205ENST00000472928 C1QTNF1Q9BXJ1 281 aa7.5□□□□□ -1.21
HDAC1-205ENST00000472928 PPP1R12CQ9BZL4 782 aa7.5□□□□□ -1.21
HDAC1-205ENST00000472928 SPATC1LQ9H0A9 340 aa7.5□□□□□ -1.21
HDAC1-205ENST00000472928 RPAP3Q9H6T3 665 aaPredicted RBP7.5□□□□□ -1.21
HDAC1-205ENST00000472928 ARMT1Q9H993 441 aa7.5□□□□□ -1.21
HDAC1-205ENST00000472928 TMEM39AQ9NV64 488 aa7.5□□□□□ -1.21
HDAC1-205ENST00000472928 MAP10Q9P2G4 905 aa7.5□□□□□ -1.21
HDAC1-205ENST00000472928 TBX21Q9UL17 535 aa7.5□□□□□ -1.21
HDAC1-205ENST00000472928 PLXNA1Q9UIW2 1896 aa7.49□□□□□ -1.21
HDAC1-205ENST00000472928 MAGEB6P1A0A0J9YX57 407 aa7.49□□□□□ -1.21
HDAC1-205ENST00000472928 FOXP2O15409 715 aa7.49□□□□□ -1.21
HDAC1-205ENST00000472928 STRNO43815 780 aa7.49□□□□□ -1.21
HDAC1-205ENST00000472928 ADAMTS4O75173 837 aa7.49□□□□□ -1.21
HDAC1-205ENST00000472928 DXOO77932 396 aaKnown RBP7.49□□□□□ -1.21
HDAC1-205ENST00000472928 CD2BP2O95400 341 aaKnown RBP7.49□□□□□ -1.21
HDAC1-205ENST00000472928 PGK1P00558 417 aa7.49□□□□□ -1.21
HDAC1-205ENST00000472928 TIMP1P01033 207 aa7.49□□□□□ -1.21
HDAC1-205ENST00000472928 CASTP20810 708 aaKnown RBP7.49□□□□□ -1.21
HDAC1-205ENST00000472928 GUCY1A2P33402 732 aa7.49□□□□□ -1.21
HDAC1-205ENST00000472928 USP14P54578 494 aa7.49□□□□□ -1.21
HDAC1-205ENST00000472928 NR1H3Q13133 447 aa7.49□□□□□ -1.21
HDAC1-205ENST00000472928 TMEM240Q5SV17 173 aa7.49□□□□□ -1.21
HDAC1-205ENST00000472928 FAM160A2Q8N612 972 aaPredicted RBP7.49□□□□□ -1.21
HDAC1-205ENST00000472928 SHCBP1Q8NEM2 672 aa7.49□□□□□ -1.21
HDAC1-205ENST00000472928 KCNB2Q92953 911 aa7.49□□□□□ -1.21
HDAC1-205ENST00000472928 LENG1Q96BZ8 264 aaPredicted RBP7.49□□□□□ -1.21
HDAC1-205ENST00000472928 IL17RAQ96F46 866 aa7.49□□□□□ -1.21
HDAC1-205ENST00000472928 MAML3Q96JK9 1138 aa7.49□□□□□ -1.21
HDAC1-205ENST00000472928 JAKMIP1Q96N16 626 aaKnown RBP7.49□□□□□ -1.21
HDAC1-205ENST00000472928 LRFN3Q9BTN0 628 aa7.49□□□□□ -1.21
HDAC1-205ENST00000472928 UPF3BQ9BZI7 483 aaKnown RBP7.49□□□□□ -1.21
HDAC1-205ENST00000472928 EPHX3Q9H6B9 360 aa7.49□□□□□ -1.21
HDAC1-205ENST00000472928 EPB41L4AQ9HCS5 686 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms