RNA–Protein interactions for RNA: ENST00000472219.5

SNX21-209, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 1,858 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-209ENST00000472219 ONECUT3O60422 494 aaPredicted RBP23.27■■□□□ 1.32
SNX21-209ENST00000472219 FGFR1OPO95684 399 aaKnown RBP23.27■■□□□ 1.32
SNX21-209ENST00000472219 SNHG28P0DPA3 235 aa23.27■■□□□ 1.32
SNX21-209ENST00000472219 GABPAQ06546 454 aa23.27■■□□□ 1.32
SNX21-209ENST00000472219 PDIA5Q14554 519 aa23.27■■□□□ 1.32
SNX21-209ENST00000472219 BRD3Q15059 726 aa23.27■■□□□ 1.32
SNX21-209ENST00000472219 EHBP1Q8NDI1 1231 aa23.27■■□□□ 1.32
SNX21-209ENST00000472219 LRWD1Q9UFC0 647 aa23.27■■□□□ 1.32
SNX21-209ENST00000472219 PVALEFA0A1B0GWK0 134 aa23.26■■□□□ 1.31
SNX21-209ENST00000472219 PPEF1O14829 653 aaPredicted RBP23.26■■□□□ 1.31
SNX21-209ENST00000472219 TTLL1O95922 423 aa23.26■■□□□ 1.31
SNX21-209ENST00000472219 TUBBP07437 444 aa23.26■■□□□ 1.31
SNX21-209ENST00000472219 GTF2IP78347 998 aa23.26■■□□□ 1.31
SNX21-209ENST00000472219 MEX3CQ5U5Q3 659 aaKnown RBP23.26■■□□□ 1.31
SNX21-209ENST00000472219 CC2D1AQ6P1N0 951 aaPredicted RBP23.26■■□□□ 1.31
SNX21-209ENST00000472219 SLC35F6Q8N357 371 aa23.26■■□□□ 1.31
SNX21-209ENST00000472219 MTMR9Q96QG7 549 aa23.26■■□□□ 1.31
SNX21-209ENST00000472219 DUSP9Q99956 384 aaKnown RBP23.26■■□□□ 1.31
SNX21-209ENST00000472219 SLF1Q9BQI6 1058 aa23.26■■□□□ 1.31
SNX21-209ENST00000472219 LTBP1Q14766 1721 aa23.26■■□□□ 1.31
SNX21-209ENST00000472219 CCDC151A5D8V7 595 aa23.26■■□□□ 1.31
SNX21-209ENST00000472219 IPO7O95373 1038 aaKnown RBP23.26■■□□□ 1.31
SNX21-209ENST00000472219 TRIM21P19474 475 aaKnown RBP23.26■■□□□ 1.31
SNX21-209ENST00000472219 CYLC1P35663 651 aaPredicted RBP23.26■■□□□ 1.31
SNX21-209ENST00000472219 FKBP15Q5T1M5 1219 aa23.26■■□□□ 1.31
SNX21-209ENST00000472219 POTEDQ86YR6 584 aa23.26■■□□□ 1.31
SNX21-209ENST00000472219 PARD6BQ9BYG5 372 aa23.26■■□□□ 1.31
SNX21-209ENST00000472219 UBA5Q9GZZ9 404 aa23.26■■□□□ 1.31
SNX21-209ENST00000472219 IGKV6D-41A0A0C4DH26 115 aa23.25■■□□□ 1.31
SNX21-209ENST00000472219 RNF225M0QZC1 329 aaPredicted RBP23.25■■□□□ 1.31
SNX21-209ENST00000472219 ARHGAP25P42331 645 aa23.25■■□□□ 1.31
SNX21-209ENST00000472219 TXKP42681 527 aa23.25■■□□□ 1.31
SNX21-209ENST00000472219 MTIF2P46199 727 aaKnown RBP23.25■■□□□ 1.31
SNX21-209ENST00000472219 TBC1D8BQ0IIM8 1120 aa23.25■■□□□ 1.31
SNX21-209ENST00000472219 TERF2Q15554 542 aa23.25■■□□□ 1.31
SNX21-209ENST00000472219 FIGNQ5HY92 759 aa23.25■■□□□ 1.31
SNX21-209ENST00000472219 ZNF662Q6ZS27 426 aa23.25■■□□□ 1.31
SNX21-209ENST00000472219 CNOT6LQ96LI5 555 aaKnown RBP23.25■■□□□ 1.31
SNX21-209ENST00000472219 NAP1L4Q99733 375 aaKnown RBP23.25■■□□□ 1.31
SNX21-209ENST00000472219 PNMA6FA0A0J9YX94 578 aa23.24■■□□□ 1.31
SNX21-209ENST00000472219 B4DLN1 442 aa23.24■■□□□ 1.31
SNX21-209ENST00000472219 MEA1Q16626 185 aa23.24■■□□□ 1.31
SNX21-209ENST00000472219 GPATCH4Q5T3I0 446 aaKnown RBP23.24■■□□□ 1.31
SNX21-209ENST00000472219 UNC13DQ70J99 1090 aa23.24■■□□□ 1.31
SNX21-209ENST00000472219 ZNF771Q7L3S4 317 aaPredicted RBP23.24■■□□□ 1.31
SNX21-209ENST00000472219 LRRC15Q8TF66 581 aa23.24■■□□□ 1.31
SNX21-209ENST00000472219 MMTAG2Q9BU76 263 aaKnown RBP23.24■■□□□ 1.31
SNX21-209ENST00000472219 SERPINB13Q9UIV8 391 aa23.24■■□□□ 1.31
SNX21-209ENST00000472219 FRMPD2Q68DX3 1309 aaPredicted RBP23.24■■□□□ 1.31
SNX21-209ENST00000472219 QSER1Q2KHR3 1735 aa23.24■■□□□ 1.31
SNX21-209ENST00000472219 ABCB11O95342 1321 aa23.24■■□□□ 1.31
SNX21-209ENST00000472219 ZBED6P86452 979 aa23.24■■□□□ 1.31
SNX21-209ENST00000472219 STK4Q13043 487 aa23.24■■□□□ 1.31
SNX21-209ENST00000472219 PICALMQ13492 652 aa23.24■■□□□ 1.31
SNX21-209ENST00000472219 ANKRD40Q6AI12 368 aa23.24■■□□□ 1.31
SNX21-209ENST00000472219 CCDC170Q8IYT3 715 aa23.24■■□□□ 1.31
SNX21-209ENST00000472219 RIC8AQ9NPQ8 531 aa23.24■■□□□ 1.31
SNX21-209ENST00000472219 A0A1W2PQJ5 194 aa23.23■■□□□ 1.31
SNX21-209ENST00000472219 HLA-DOAP06340 250 aa23.23■■□□□ 1.31
SNX21-209ENST00000472219 KRT79Q5XKE5 535 aa23.23■■□□□ 1.31
SNX21-209ENST00000472219 PPP4R3AQ6IN85 833 aa23.23■■□□□ 1.31
SNX21-209ENST00000472219 DPP8Q6V1X1 898 aaPredicted RBP23.23■■□□□ 1.31
SNX21-209ENST00000472219 ZSCAN29Q8IWY8 852 aaPredicted RBP23.23■■□□□ 1.31
SNX21-209ENST00000472219 SEPT12Q8IYM1 358 aa23.23■■□□□ 1.31
SNX21-209ENST00000472219 LARP4BQ92615 738 aaKnown RBP23.23■■□□□ 1.31
SNX21-209ENST00000472219 NOC4LQ9BVI4 516 aaKnown RBP23.23■■□□□ 1.31
SNX21-209ENST00000472219 GLT8D2Q9H1C3 349 aa23.23■■□□□ 1.31
SNX21-209ENST00000472219 ATP6V0A2Q9Y487 856 aa23.23■■□□□ 1.31
SNX21-209ENST00000472219 CTAGE15A4D2H0 777 aa23.22■■□□□ 1.31
SNX21-209ENST00000472219 POLRMTO00411 1230 aaKnown RBP23.22■■□□□ 1.31
SNX21-209ENST00000472219 ERLIN1O75477 346 aa23.22■■□□□ 1.31
SNX21-209ENST00000472219 CTAGE8P0CG41 777 aa23.22■■□□□ 1.31
SNX21-209ENST00000472219 ZNF543Q08ER8 600 aa23.22■■□□□ 1.31
SNX21-209ENST00000472219 CTAGE6Q86UF2 777 aa23.22■■□□□ 1.31
SNX21-209ENST00000472219 CTAGE4Q8IX94 777 aa23.22■■□□□ 1.31
SNX21-209ENST00000472219 LRRC47Q8N1G4 583 aaKnown RBP23.22■■□□□ 1.31
SNX21-209ENST00000472219 ERGIC2Q96RQ1 377 aa23.22■■□□□ 1.31
SNX21-209ENST00000472219 CHP1Q99653 195 aa23.22■■□□□ 1.31
SNX21-209ENST00000472219 ZC3H12CQ9C0D7 883 aaKnown RBP23.22■■□□□ 1.31
SNX21-209ENST00000472219 TMEM260Q9NX78 707 aa23.22■■□□□ 1.31
SNX21-209ENST00000472219 A0A0U1RQJ8 604 aa23.22■■□□□ 1.31
SNX21-209ENST00000472219 KRT86O43790 486 aa23.22■■□□□ 1.31
SNX21-209ENST00000472219 AKR1B1P15121 316 aa23.22■■□□□ 1.31
SNX21-209ENST00000472219 GCFC2P16383 781 aaKnown RBP23.22■■□□□ 1.31
SNX21-209ENST00000472219 MRPL12P52815 198 aaKnown RBP23.22■■□□□ 1.31
SNX21-209ENST00000472219 CDK17Q00537 523 aa23.22■■□□□ 1.31
SNX21-209ENST00000472219 PSMD2Q13200 908 aa23.22■■□□□ 1.31
SNX21-209ENST00000472219 GRB10Q13322 594 aa23.22■■□□□ 1.31
SNX21-209ENST00000472219 FOXR2Q6PJQ5 311 aa23.22■■□□□ 1.31
SNX21-209ENST00000472219 HNRNPLLQ8WVV9 542 aaKnown RBP23.22■■□□□ 1.31
SNX21-209ENST00000472219 ATRIPQ8WXE1 791 aa23.22■■□□□ 1.31
SNX21-209ENST00000472219 CUL5Q93034 780 aa23.22■■□□□ 1.31
SNX21-209ENST00000472219 PCMTD1Q96MG8 357 aaPredicted RBP23.22■■□□□ 1.31
SNX21-209ENST00000472219 PSMD14O00487 310 aa23.21■■□□□ 1.31
SNX21-209ENST00000472219 DDR1Q08345 913 aa23.21■■□□□ 1.31
SNX21-209ENST00000472219 SEPT2Q15019 361 aa23.21■■□□□ 1.31
SNX21-209ENST00000472219 CENPPQ6IPU0 288 aa23.21■■□□□ 1.31
SNX21-209ENST00000472219 MSANTD4Q8NCY6 345 aa23.21■■□□□ 1.31
SNX21-209ENST00000472219 TTYH3Q9C0H2 523 aa23.21■■□□□ 1.31
SNX21-209ENST00000472219 PUF60Q9UHX1 559 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms