RNA–Protein interactions for RNA: ENST00000470742.5

ITSN1-224, Transcript of intersectin 1, humanhuman

TSL 4

Gene ITSN1, Length 474 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-224ENST00000470742 PPP1R11O60927 126 aaPredicted RBP23.55■■□□□ 1.36
ITSN1-224ENST00000470742 PGK1P00558 417 aa23.55■■□□□ 1.36
ITSN1-224ENST00000470742 GNAQP50148 359 aa23.55■■□□□ 1.36
ITSN1-224ENST00000470742 PWP2Q15269 919 aaKnown RBP23.55■■□□□ 1.36
ITSN1-224ENST00000470742 SYNE3Q6ZMZ3 975 aa23.55■■□□□ 1.36
ITSN1-224ENST00000470742 EEPD1Q7L9B9 569 aa23.55■■□□□ 1.36
ITSN1-224ENST00000470742 RAB11FIP4Q86YS3 637 aa23.55■■□□□ 1.36
ITSN1-224ENST00000470742 MORC4Q8TE76 937 aa23.55■■□□□ 1.36
ITSN1-224ENST00000470742 JAKMIP1Q96N16 626 aaKnown RBP23.55■■□□□ 1.36
ITSN1-224ENST00000470742 LZTS2Q9BRK4 669 aa23.55■■□□□ 1.36
ITSN1-224ENST00000470742 SENP6Q9GZR1 1112 aaPredicted RBP23.55■■□□□ 1.36
ITSN1-224ENST00000470742 PCDHA1Q9Y5I3 950 aa23.55■■□□□ 1.36
ITSN1-224ENST00000470742 NR2E3Q9Y5X4 410 aa23.55■■□□□ 1.36
ITSN1-224ENST00000470742 KIAA1217Q5T5P2 1943 aa23.55■■□□□ 1.36
ITSN1-224ENST00000470742 PNMA6FA0A0J9YX94 578 aa23.54■■□□□ 1.36
ITSN1-224ENST00000470742 DUSP11O75319 330 aaKnown RBP23.54■■□□□ 1.36
ITSN1-224ENST00000470742 TRAF1Q13077 416 aa23.54■■□□□ 1.36
ITSN1-224ENST00000470742 RNF180Q86T96 592 aa23.54■■□□□ 1.36
ITSN1-224ENST00000470742 FBXO16Q8IX29 292 aaPredicted RBP23.54■■□□□ 1.36
ITSN1-224ENST00000470742 DNERQ8NFT8 737 aa23.54■■□□□ 1.36
ITSN1-224ENST00000470742 PIBF1Q8WXW3 757 aa23.54■■□□□ 1.36
ITSN1-224ENST00000470742 MPHOSPH6Q99547 160 aaKnown RBP23.54■■□□□ 1.36
ITSN1-224ENST00000470742 SPZ1Q9BXG8 430 aa23.54■■□□□ 1.36
ITSN1-224ENST00000470742 H0YGN5 161 aa23.53■■□□□ 1.36
ITSN1-224ENST00000470742 SMARCA1P28370 1054 aa23.53■■□□□ 1.36
ITSN1-224ENST00000470742 MICU3Q86XE3 530 aa23.53■■□□□ 1.36
ITSN1-224ENST00000470742 VTA1Q9NP79 307 aa23.53■■□□□ 1.36
ITSN1-224ENST00000470742 B4DLN1 442 aa23.52■■□□□ 1.36
ITSN1-224ENST00000470742 ADCY6O43306 1168 aa23.52■■□□□ 1.36
ITSN1-224ENST00000470742 PLEKHA8P1O95397 391 aa23.52■■□□□ 1.36
ITSN1-224ENST00000470742 CFBP00751 764 aa23.52■■□□□ 1.36
ITSN1-224ENST00000470742 CPA1P15085 419 aa23.52■■□□□ 1.36
ITSN1-224ENST00000470742 MRPL12P52815 198 aaKnown RBP23.52■■□□□ 1.36
ITSN1-224ENST00000470742 FGD1P98174 961 aa23.52■■□□□ 1.36
ITSN1-224ENST00000470742 TNFAIP2Q03169 654 aa23.52■■□□□ 1.36
ITSN1-224ENST00000470742 BLOC1S2Q6QNY1 142 aa23.52■■□□□ 1.36
ITSN1-224ENST00000470742 FANCBQ8NB91 859 aa23.52■■□□□ 1.36
ITSN1-224ENST00000470742 SYTL5Q8TDW5 730 aaPredicted RBP23.52■■□□□ 1.36
ITSN1-224ENST00000470742 RRP36Q96EU6 259 aaKnown RBP23.52■■□□□ 1.36
ITSN1-224ENST00000470742 USP26Q9BXU7 913 aa23.52■■□□□ 1.36
ITSN1-224ENST00000470742 SYNRGQ9UMZ2 1314 aa23.52■■□□□ 1.36
ITSN1-224ENST00000470742 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.51■■□□□ 1.35
ITSN1-224ENST00000470742 ADAMTS4O75173 837 aa23.51■■□□□ 1.35
ITSN1-224ENST00000470742 ADCYAP1R1P41586 468 aa23.51■■□□□ 1.35
ITSN1-224ENST00000470742 PDE4DQ08499 809 aa23.51■■□□□ 1.35
ITSN1-224ENST00000470742 TAPT1Q6NXT6 567 aa23.51■■□□□ 1.35
ITSN1-224ENST00000470742 APOA5Q6Q788 366 aa23.51■■□□□ 1.35
ITSN1-224ENST00000470742 NOL8Q76FK4 1167 aaKnown RBP23.51■■□□□ 1.35
ITSN1-224ENST00000470742 C7orf61Q8IZ16 206 aa23.51■■□□□ 1.35
ITSN1-224ENST00000470742 SRBD1Q8N5C6 995 aaKnown RBP23.51■■□□□ 1.35
ITSN1-224ENST00000470742 TAAR1Q96RJ0 339 aa23.51■■□□□ 1.35
ITSN1-224ENST00000470742 PDGFCQ9NRA1 345 aa23.51■■□□□ 1.35
ITSN1-224ENST00000470742 BRPF3Q9ULD4 1205 aa23.51■■□□□ 1.35
ITSN1-224ENST00000470742 OPLAHO14841 1288 aa23.5■■□□□ 1.35
ITSN1-224ENST00000470742 PSMA5P28066 241 aa23.5■■□□□ 1.35
ITSN1-224ENST00000470742 ATN1P54259 1190 aaPredicted RBP23.5■■□□□ 1.35
ITSN1-224ENST00000470742 LRRC26Q2I0M4 334 aa23.5■■□□□ 1.35
ITSN1-224ENST00000470742 IQSEC1Q6DN90 963 aa23.5■■□□□ 1.35
ITSN1-224ENST00000470742 CMTR1Q8N1G2 835 aaKnown RBP23.5■■□□□ 1.35
ITSN1-224ENST00000470742 FERMT2Q96AC1 680 aa23.5■■□□□ 1.35
ITSN1-224ENST00000470742 SPC25Q9HBM1 224 aa23.5■■□□□ 1.35
ITSN1-224ENST00000470742 COL20A1Q9P218 1284 aa23.5■■□□□ 1.35
ITSN1-224ENST00000470742 SEC63Q9UGP8 760 aaKnown RBP23.5■■□□□ 1.35
ITSN1-224ENST00000470742 PHF24Q9UPV7 400 aa23.5■■□□□ 1.35
ITSN1-224ENST00000470742 ZBTB43O43298 467 aa23.49■■□□□ 1.35
ITSN1-224ENST00000470742 C6orf222P0C671 652 aaPredicted RBP23.49■■□□□ 1.35
ITSN1-224ENST00000470742 EDNRBP24530 442 aa23.49■■□□□ 1.35
ITSN1-224ENST00000470742 HSD17B4P51659 736 aa23.49■■□□□ 1.35
ITSN1-224ENST00000470742 TMTC3Q6ZXV5 915 aa23.49■■□□□ 1.35
ITSN1-224ENST00000470742 KLHDC9Q8NEP7 349 aa23.49■■□□□ 1.35
ITSN1-224ENST00000470742 NSUN6Q8TEA1 469 aaKnown RBP23.49■■□□□ 1.35
ITSN1-224ENST00000470742 UPF3AQ9H1J1 476 aaKnown RBP23.49■■□□□ 1.35
ITSN1-224ENST00000470742 MYH7BA7E2Y1 1941 aa23.49■■□□□ 1.35
ITSN1-224ENST00000470742 KLF18A0A0U1RQI7 1052 aa23.48■■□□□ 1.35
ITSN1-224ENST00000470742 SMPD1P17405 629 aa23.48■■□□□ 1.35
ITSN1-224ENST00000470742 CASTP20810 708 aaKnown RBP23.48■■□□□ 1.35
ITSN1-224ENST00000470742 RPS6KB1P23443 525 aa23.48■■□□□ 1.35
ITSN1-224ENST00000470742 GJA9P57773 515 aa23.48■■□□□ 1.35
ITSN1-224ENST00000470742 GHRHRQ02643 423 aa23.48■■□□□ 1.35
ITSN1-224ENST00000470742 Q6ZUG5 572 aa23.48■■□□□ 1.35
ITSN1-224ENST00000470742 SAMD3Q8N6K7 520 aa23.48■■□□□ 1.35
ITSN1-224ENST00000470742 RMDN3Q96TC7 470 aa23.48■■□□□ 1.35
ITSN1-224ENST00000470742 TSEN34Q9BSV6 310 aaKnown RBP23.48■■□□□ 1.35
ITSN1-224ENST00000470742 RBM28Q9NW13 759 aaKnown RBP23.48■■□□□ 1.35
ITSN1-224ENST00000470742 MAP3K20Q9NYL2 800 aaKnown RBP23.48■■□□□ 1.35
ITSN1-224ENST00000470742 GNEQ9Y223 722 aaKnown RBP23.48■■□□□ 1.35
ITSN1-224ENST00000470742 MYADML2A6NDP7 307 aa23.47■■□□□ 1.35
ITSN1-224ENST00000470742 CST5P28325 142 aaPredicted RBP23.47■■□□□ 1.35
ITSN1-224ENST00000470742 IRX5P78411 483 aaPredicted RBP23.47■■□□□ 1.35
ITSN1-224ENST00000470742 KCNA10Q16322 511 aa23.47■■□□□ 1.35
ITSN1-224ENST00000470742 RTN1Q16799 776 aa23.47■■□□□ 1.35
ITSN1-224ENST00000470742 ARHGEF16Q5VV41 709 aa23.47■■□□□ 1.35
ITSN1-224ENST00000470742 SLC39A5Q6ZMH5 540 aa23.47■■□□□ 1.35
ITSN1-224ENST00000470742 CCDC82Q8N4S0 544 aa23.47■■□□□ 1.35
ITSN1-224ENST00000470742 NAP1L2Q9ULW6 460 aaPredicted RBP23.47■■□□□ 1.35
ITSN1-224ENST00000470742 GCOM1H8Y6P7 765 aaPredicted RBP23.46■■□□□ 1.35
ITSN1-224ENST00000470742 POLR2MP0CAP2 368 aa23.46■■□□□ 1.35
ITSN1-224ENST00000470742 HOXA13P31271 388 aaPredicted RBP23.46■■□□□ 1.35
ITSN1-224ENST00000470742 TLK2Q86UE8 772 aa23.46■■□□□ 1.35
ITSN1-224ENST00000470742 PCSK9Q8NBP7 692 aaKnown RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms