RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 ANO3Q9BYT9 981 aa9.93□□□□□ -0.82
HDLBP-233ENST00000470710 TMEM260Q9NX78 707 aa9.93□□□□□ -0.82
HDLBP-233ENST00000470710 MAP3K20Q9NYL2 800 aaKnown RBP9.93□□□□□ -0.82
HDLBP-233ENST00000470710 PNMA3Q9UL41 463 aa9.93□□□□□ -0.82
HDLBP-233ENST00000470710 PCDHB6Q9Y5E3 794 aa9.93□□□□□ -0.82
HDLBP-233ENST00000470710 TLL2Q9Y6L7 1015 aa9.93□□□□□ -0.82
HDLBP-233ENST00000470710 PTPRFP10586 1907 aa9.92□□□□□ -0.82
HDLBP-233ENST00000470710 A0A1W2PQ27 194 aa9.92□□□□□ -0.82
HDLBP-233ENST00000470710 A0A1W2PQ64 194 aa9.92□□□□□ -0.82
HDLBP-233ENST00000470710 A0A1W2PQD8 194 aa9.92□□□□□ -0.82
HDLBP-233ENST00000470710 TESPA1A2RU30 521 aaPredicted RBP9.92□□□□□ -0.82
HDLBP-233ENST00000470710 SPDYE3A6NKU9 549 aa9.92□□□□□ -0.82
HDLBP-233ENST00000470710 WNT7AO00755 349 aa9.92□□□□□ -0.82
HDLBP-233ENST00000470710 TRAK2O60296 914 aa9.92□□□□□ -0.82
HDLBP-233ENST00000470710 GADD45BO75293 160 aaPredicted RBP9.92□□□□□ -0.82
HDLBP-233ENST00000470710 ALAS1P13196 640 aa9.92□□□□□ -0.82
HDLBP-233ENST00000470710 GCFC2P16383 781 aaKnown RBP9.92□□□□□ -0.82
HDLBP-233ENST00000470710 ATP2B1P20020 1258 aa9.92□□□□□ -0.82
HDLBP-233ENST00000470710 COPB2P35606 906 aa9.92□□□□□ -0.82
HDLBP-233ENST00000470710 SREBF1P36956 1147 aa9.92□□□□□ -0.82
HDLBP-233ENST00000470710 STAT3P40763 770 aa9.92□□□□□ -0.82
HDLBP-233ENST00000470710 ME1P48163 572 aa9.92□□□□□ -0.82
HDLBP-233ENST00000470710 ZNF157P51786 506 aaPredicted RBP9.92□□□□□ -0.82
HDLBP-233ENST00000470710 ATP2C1P98194 919 aaPredicted RBP9.92□□□□□ -0.82
HDLBP-233ENST00000470710 NBR1Q14596 966 aa9.92□□□□□ -0.82
HDLBP-233ENST00000470710 KLHL40Q2TBA0 621 aa9.92□□□□□ -0.82
HDLBP-233ENST00000470710 SNRNP48Q6IEG0 339 aaKnown RBP9.92□□□□□ -0.82
HDLBP-233ENST00000470710 RGMBQ6NW40 437 aa9.92□□□□□ -0.82
HDLBP-233ENST00000470710 POTEEQ6S8J3 1075 aa9.92□□□□□ -0.82
HDLBP-233ENST00000470710 CRYGNQ8WXF5 182 aa9.92□□□□□ -0.82
HDLBP-233ENST00000470710 HHIPL1Q96JK4 782 aa9.92□□□□□ -0.82
HDLBP-233ENST00000470710 PGBD1Q96JS3 809 aa9.92□□□□□ -0.82
HDLBP-233ENST00000470710 TRERF1Q96PN7 1200 aa9.92□□□□□ -0.82
HDLBP-233ENST00000470710 NAP1L4Q99733 375 aaKnown RBP9.92□□□□□ -0.82
HDLBP-233ENST00000470710 RNF146Q9NTX7 359 aa9.92□□□□□ -0.82
HDLBP-233ENST00000470710 PCDHA7Q9UN72 937 aa9.92□□□□□ -0.82
HDLBP-233ENST00000470710 RABGAP1Q9Y3P9 1069 aa9.92□□□□□ -0.82
HDLBP-233ENST00000470710 RLFQ13129 1914 aa9.92□□□□□ -0.82
HDLBP-233ENST00000470710 GOLGA6L4A6NEF3 574 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 MANSC4A6NHS7 340 aaPredicted RBP9.91□□□□□ -0.82
HDLBP-233ENST00000470710 TMEM88BA6NKF7 163 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 BTBD19C9JJ37 291 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 LAD1O00515 517 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 NFIBO00712 420 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 EDIL3O43854 480 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 CNMDO75829 334 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 CFBP00751 764 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 CYP3A4P08684 503 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 SLC10A3P09131 477 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 PTPREP23469 700 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 YY1P25490 414 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 HOXA13P31271 388 aaPredicted RBP9.91□□□□□ -0.82
HDLBP-233ENST00000470710 USP11P51784 963 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 ZNF174Q15697 407 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 MUM1L1Q5H9M0 696 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 AXDND1Q5T1B0 1012 aaPredicted RBP9.91□□□□□ -0.82
HDLBP-233ENST00000470710 ARL6IP4Q66PJ3 421 aaKnown RBP9.91□□□□□ -0.82
HDLBP-233ENST00000470710 ADALQ6DHV7 355 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 PPP4R3AQ6IN85 833 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 MOXD1Q6UVY6 613 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.91□□□□□ -0.82
HDLBP-233ENST00000470710 RIOX2Q8IUF8 465 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 C4orf32Q8N8J7 132 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 KRI1Q8N9T8 703 aaKnown RBP9.91□□□□□ -0.82
HDLBP-233ENST00000470710 CHST13Q8NET6 341 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 GPT2Q8TD30 523 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 FERMT2Q96AC1 680 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 ACAD9Q9H845 621 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 EHMT1Q9H9B1 1298 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 ZCCHC17Q9NP64 241 aaKnown RBP9.91□□□□□ -0.82
HDLBP-233ENST00000470710 BTBD7Q9P203 1132 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 FBXO40Q9UH90 709 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 RIPK3Q9Y572 518 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 DDX49Q9Y6V7 483 aaKnown RBP9.91□□□□□ -0.82
HDLBP-233ENST00000470710 TRPM7Q96QT4 1865 aa9.91□□□□□ -0.82
HDLBP-233ENST00000470710 FRMPD4Q14CM0 1322 aa9.9□□□□□ -0.82
HDLBP-233ENST00000470710 RPTORQ8N122 1335 aa9.9□□□□□ -0.82
HDLBP-233ENST00000470710 CYP3A7-CYP3A51PA0A087WV96 503 aa9.9□□□□□ -0.82
HDLBP-233ENST00000470710 PDHXO00330 501 aa9.9□□□□□ -0.82
HDLBP-233ENST00000470710 CUTAO60888 179 aa9.9□□□□□ -0.82
HDLBP-233ENST00000470710 SLC25A27O95847 323 aa9.9□□□□□ -0.82
HDLBP-233ENST00000470710 CYP3A7P24462 503 aa9.9□□□□□ -0.82
HDLBP-233ENST00000470710 MARCKSP29966 332 aaPredicted RBP9.9□□□□□ -0.82
HDLBP-233ENST00000470710 CIITAP33076 1130 aa9.9□□□□□ -0.82
HDLBP-233ENST00000470710 MCM7P33993 719 aa9.9□□□□□ -0.82
HDLBP-233ENST00000470710 PRPHP41219 470 aa9.9□□□□□ -0.82
HDLBP-233ENST00000470710 GCLCP48506 637 aaPredicted RBP9.9□□□□□ -0.82
HDLBP-233ENST00000470710 ARHGAP4P98171 946 aa9.9□□□□□ -0.82
HDLBP-233ENST00000470710 MKRN3Q13064 507 aaKnown RBP9.9□□□□□ -0.82
HDLBP-233ENST00000470710 PTGDRQ13258 359 aa9.9□□□□□ -0.82
HDLBP-233ENST00000470710 LETM2Q2VYF4 491 aa9.9□□□□□ -0.82
HDLBP-233ENST00000470710 ZNF579Q8NAF0 562 aaKnown RBP9.9□□□□□ -0.82
HDLBP-233ENST00000470710 ZNF784Q8NCA9 323 aaPredicted RBP9.9□□□□□ -0.82
HDLBP-233ENST00000470710 SYTL5Q8TDW5 730 aaPredicted RBP9.9□□□□□ -0.82
HDLBP-233ENST00000470710 TBC1D5Q92609 795 aa9.9□□□□□ -0.82
HDLBP-233ENST00000470710 CCDC102AQ96A19 550 aa9.9□□□□□ -0.82
HDLBP-233ENST00000470710 MBOAT7Q96N66 472 aa9.9□□□□□ -0.82
HDLBP-233ENST00000470710 PARK7Q99497 189 aaKnown RBP9.9□□□□□ -0.82
HDLBP-233ENST00000470710 SPATC1LQ9H0A9 340 aa9.9□□□□□ -0.82
HDLBP-233ENST00000470710 HOMER2Q9NSB8 354 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms