RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 UBXN1Q04323 297 aa22.52■■□□□ 1.2
CDHR3-207ENST00000470188 POTEDQ86YR6 584 aa22.52■■□□□ 1.2
CDHR3-207ENST00000470188 CLEC10AQ8IUN9 316 aa22.52■■□□□ 1.2
CDHR3-207ENST00000470188 NUP88Q99567 741 aaPredicted RBP22.52■■□□□ 1.2
CDHR3-207ENST00000470188 THAP9Q9H5L6 903 aa22.52■■□□□ 1.2
CDHR3-207ENST00000470188 SWAP70Q9UH65 585 aa22.52■■□□□ 1.2
CDHR3-207ENST00000470188 TTLL1O95922 423 aa22.51■■□□□ 1.19
CDHR3-207ENST00000470188 PROM2Q8N271 834 aa22.51■■□□□ 1.19
CDHR3-207ENST00000470188 COA7Q96BR5 231 aa22.51■■□□□ 1.19
CDHR3-207ENST00000470188 TRIM47Q96LD4 638 aa22.51■■□□□ 1.19
CDHR3-207ENST00000470188 MXD3Q9BW11 206 aa22.51■■□□□ 1.19
CDHR3-207ENST00000470188 TRIM9Q9C026 710 aa22.51■■□□□ 1.19
CDHR3-207ENST00000470188 GPCPD1Q9NPB8 672 aa22.51■■□□□ 1.19
CDHR3-207ENST00000470188 ABHD10Q9NUJ1 306 aa22.51■■□□□ 1.19
CDHR3-207ENST00000470188 NPR1P16066 1061 aa22.5■■□□□ 1.19
CDHR3-207ENST00000470188 EEF1GP26641 437 aaKnown RBP22.5■■□□□ 1.19
CDHR3-207ENST00000470188 SCNN1DP51172 638 aa22.5■■□□□ 1.19
CDHR3-207ENST00000470188 TUBB4BP68371 445 aa22.5■■□□□ 1.19
CDHR3-207ENST00000470188 ZSCAN26Q16670 478 aa22.5■■□□□ 1.19
CDHR3-207ENST00000470188 DOK7Q18PE1 504 aa22.5■■□□□ 1.19
CDHR3-207ENST00000470188 POTEAQ6S8J7 498 aa22.5■■□□□ 1.19
CDHR3-207ENST00000470188 EPC1Q9H2F5 836 aa22.5■■□□□ 1.19
CDHR3-207ENST00000470188 LZTFL1Q9NQ48 299 aa22.5■■□□□ 1.19
CDHR3-207ENST00000470188 TMTC1Q8IUR5 882 aa22.5■■□□□ 1.19
CDHR3-207ENST00000470188 MSL3Q8N5Y2 521 aaKnown RBP22.5■■□□□ 1.19
CDHR3-207ENST00000470188 GOLGA5Q8TBA6 731 aa22.5■■□□□ 1.19
CDHR3-207ENST00000470188 DHTKD1Q96HY7 919 aaPredicted RBP22.5■■□□□ 1.19
CDHR3-207ENST00000470188 C7orf25Q9BPX7 421 aa22.5■■□□□ 1.19
CDHR3-207ENST00000470188 EXOC1Q9NV70 894 aa22.5■■□□□ 1.19
CDHR3-207ENST00000470188 QSER1Q2KHR3 1735 aa22.5■■□□□ 1.19
CDHR3-207ENST00000470188 ANKRD31Q8N7Z5 1873 aa22.49■■□□□ 1.19
CDHR3-207ENST00000470188 POTEB2H3BUK9 544 aa22.49■■□□□ 1.19
CDHR3-207ENST00000470188 MAP2K7O14733 419 aa22.49■■□□□ 1.19
CDHR3-207ENST00000470188 TXKP42681 527 aa22.49■■□□□ 1.19
CDHR3-207ENST00000470188 HNRNPLLQ8WVV9 542 aaKnown RBP22.49■■□□□ 1.19
CDHR3-207ENST00000470188 CALML4Q96GE6 196 aa22.49■■□□□ 1.19
CDHR3-207ENST00000470188 MMTAG2Q9BU76 263 aaKnown RBP22.49■■□□□ 1.19
CDHR3-207ENST00000470188 ZCCHC17Q9NP64 241 aaKnown RBP22.49■■□□□ 1.19
CDHR3-207ENST00000470188 MAGEC2Q9UBF1 373 aaPredicted RBP22.49■■□□□ 1.19
CDHR3-207ENST00000470188 MYO3BQ8WXR4 1341 aa22.49■■□□□ 1.19
CDHR3-207ENST00000470188 ASIC1P78348 528 aa22.49■■□□□ 1.19
CDHR3-207ENST00000470188 AMPD3Q01432 767 aa22.49■■□□□ 1.19
CDHR3-207ENST00000470188 PDE4DQ08499 809 aa22.49■■□□□ 1.19
CDHR3-207ENST00000470188 ZNF543Q08ER8 600 aa22.49■■□□□ 1.19
CDHR3-207ENST00000470188 CALCRLQ16602 461 aa22.49■■□□□ 1.19
CDHR3-207ENST00000470188 LONRF2Q1L5Z9 754 aa22.49■■□□□ 1.19
CDHR3-207ENST00000470188 TTI2Q6NXR4 508 aa22.49■■□□□ 1.19
CDHR3-207ENST00000470188 NOC3LQ8WTT2 800 aaKnown RBP22.49■■□□□ 1.19
CDHR3-207ENST00000470188 MTMR9Q96QG7 549 aa22.49■■□□□ 1.19
CDHR3-207ENST00000470188 LGALS16A8MUM7 142 aa22.48■■□□□ 1.19
CDHR3-207ENST00000470188 RNF225M0QZC1 329 aaPredicted RBP22.48■■□□□ 1.19
CDHR3-207ENST00000470188 HMGB2P26583 209 aaKnown RBP22.48■■□□□ 1.19
CDHR3-207ENST00000470188 SHMT1P34896 483 aa22.48■■□□□ 1.19
CDHR3-207ENST00000470188 TUBB2AQ13885 445 aa22.48■■□□□ 1.19
CDHR3-207ENST00000470188 CDC42EP5Q6NZY7 148 aa22.48■■□□□ 1.19
CDHR3-207ENST00000470188 NLGN1Q8N2Q7 840 aa22.48■■□□□ 1.19
CDHR3-207ENST00000470188 TUBB2BQ9BVA1 445 aa22.48■■□□□ 1.19
CDHR3-207ENST00000470188 G3V3G9 751 aa22.48■■□□□ 1.19
CDHR3-207ENST00000470188 ERVK-24P63145 666 aa22.48■■□□□ 1.19
CDHR3-207ENST00000470188 DCAF8Q5TAQ9 597 aa22.48■■□□□ 1.19
CDHR3-207ENST00000470188 CYP26C1Q6V0L0 522 aa22.48■■□□□ 1.19
CDHR3-207ENST00000470188 MB21D1Q8N884 522 aa22.48■■□□□ 1.19
CDHR3-207ENST00000470188 TEKT1Q969V4 418 aa22.48■■□□□ 1.19
CDHR3-207ENST00000470188 IRX2Q9BZI1 471 aaPredicted RBP22.48■■□□□ 1.19
CDHR3-207ENST00000470188 PNMA6FA0A0J9YX94 578 aa22.47■■□□□ 1.19
CDHR3-207ENST00000470188 KIF5CO60282 957 aa22.47■■□□□ 1.19
CDHR3-207ENST00000470188 HLA-DOAP06340 250 aa22.47■■□□□ 1.19
CDHR3-207ENST00000470188 ALDH1B1P30837 517 aa22.47■■□□□ 1.19
CDHR3-207ENST00000470188 KRT9P35527 623 aa22.47■■□□□ 1.19
CDHR3-207ENST00000470188 PPP1R18Q6NYC8 613 aa22.47■■□□□ 1.19
CDHR3-207ENST00000470188 HHIPL2Q6UWX4 724 aa22.47■■□□□ 1.19
CDHR3-207ENST00000470188 JMJD4Q9H9V9 463 aa22.47■■□□□ 1.19
CDHR3-207ENST00000470188 ADAM21Q9UKJ8 722 aa22.47■■□□□ 1.19
CDHR3-207ENST00000470188 C10orf71Q711Q0 1435 aa22.46■■□□□ 1.19
CDHR3-207ENST00000470188 A0A0U1RQJ8 604 aa22.46■■□□□ 1.19
CDHR3-207ENST00000470188 BICDL2A1A5D9 508 aa22.46■■□□□ 1.19
CDHR3-207ENST00000470188 PES1O00541 588 aaKnown RBP22.46■■□□□ 1.19
CDHR3-207ENST00000470188 TMEM266Q2M3C6 531 aa22.46■■□□□ 1.19
CDHR3-207ENST00000470188 SRGAP1Q7Z6B7 1085 aa22.46■■□□□ 1.19
CDHR3-207ENST00000470188 ADGRF4Q8IZF3 695 aa22.46■■□□□ 1.19
CDHR3-207ENST00000470188 CSGALNACT2Q8N6G5 542 aa22.46■■□□□ 1.19
CDHR3-207ENST00000470188 ATRIPQ8WXE1 791 aa22.46■■□□□ 1.19
CDHR3-207ENST00000470188 P2RX5Q93086 422 aa22.46■■□□□ 1.19
CDHR3-207ENST00000470188 TMX4Q9H1E5 349 aaPredicted RBP22.46■■□□□ 1.19
CDHR3-207ENST00000470188 LRWD1Q9UFC0 647 aa22.46■■□□□ 1.19
CDHR3-207ENST00000470188 A0A1W2PQC6 194 aa22.46■■□□□ 1.19
CDHR3-207ENST00000470188 MPHOSPH10O00566 681 aaKnown RBP22.46■■□□□ 1.19
CDHR3-207ENST00000470188 SLC37A4O43826 429 aa22.46■■□□□ 1.19
CDHR3-207ENST00000470188 TDP2O95551 362 aa22.46■■□□□ 1.19
CDHR3-207ENST00000470188 CCNE1P24864 410 aa22.46■■□□□ 1.19
CDHR3-207ENST00000470188 FXR2P51116 673 aaKnown RBP eCLIP22.46■■□□□ 1.19
CDHR3-207ENST00000470188 APOBEC3HQ6NTF7 200 aaKnown RBP22.46■■□□□ 1.19
CDHR3-207ENST00000470188 CEP112Q8N8E3 955 aa22.46■■□□□ 1.19
CDHR3-207ENST00000470188 DUSP9Q99956 384 aaKnown RBP22.46■■□□□ 1.19
CDHR3-207ENST00000470188 MYH8P13535 1937 aa22.46■■□□□ 1.19
CDHR3-207ENST00000470188 PPP1R2P41236 205 aa22.45■■□□□ 1.18
CDHR3-207ENST00000470188 CHMP4BP1P59074 171 aa22.45■■□□□ 1.18
CDHR3-207ENST00000470188 STK4Q13043 487 aa22.45■■□□□ 1.18
CDHR3-207ENST00000470188 ACRBPQ8NEB7 543 aa22.45■■□□□ 1.18
CDHR3-207ENST00000470188 ZNF507Q8TCN5 953 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms