RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 CACNA1HO95180 2353 aa9.98□□□□□ -0.81
LSM2-210ENST00000470086 ZNF536O15090 1300 aa9.98□□□□□ -0.81
LSM2-210ENST00000470086 SMPD1P17405 629 aa9.97□□□□□ -0.81
LSM2-210ENST00000470086 WDR5P61964 334 aaKnown RBP9.97□□□□□ -0.81
LSM2-210ENST00000470086 TNNI3KQ59H18 835 aa9.97□□□□□ -0.81
LSM2-210ENST00000470086 TTC39AQ5SRH9 613 aa9.97□□□□□ -0.81
LSM2-210ENST00000470086 GORABQ5T7V8 394 aa9.97□□□□□ -0.81
LSM2-210ENST00000470086 ATF7IPQ6VMQ6 1270 aa9.97□□□□□ -0.81
LSM2-210ENST00000470086 CTAGE1Q96RT6 745 aa9.97□□□□□ -0.81
LSM2-210ENST00000470086 KCNH6Q9H252 994 aa9.97□□□□□ -0.81
LSM2-210ENST00000470086 FPGT-TNNI3KV9GXZ4 949 aa9.97□□□□□ -0.81
LSM2-210ENST00000470086 LINC01553A4QN01 128 aa9.96□□□□□ -0.82
LSM2-210ENST00000470086 SOWAHBA6NEL2 793 aa9.96□□□□□ -0.82
LSM2-210ENST00000470086 GFRA3O60609 400 aa9.96□□□□□ -0.82
LSM2-210ENST00000470086 IDH1O75874 414 aaKnown RBP9.96□□□□□ -0.82
LSM2-210ENST00000470086 UQCRFS1P1P0C7P4 283 aa9.96□□□□□ -0.82
LSM2-210ENST00000470086 VCPP55072 806 aaKnown RBP9.96□□□□□ -0.82
LSM2-210ENST00000470086 FSCN1Q16658 493 aaKnown RBP9.96□□□□□ -0.82
LSM2-210ENST00000470086 TMEM179Q6ZVK1 233 aa9.96□□□□□ -0.82
LSM2-210ENST00000470086 FBXO16Q8IX29 292 aaPredicted RBP9.96□□□□□ -0.82
LSM2-210ENST00000470086 LCORLQ8N3X6 602 aa9.96□□□□□ -0.82
LSM2-210ENST00000470086 PURBQ96QR8 312 aaKnown RBP9.96□□□□□ -0.82
LSM2-210ENST00000470086 C17orf80Q9BSJ5 609 aa9.96□□□□□ -0.82
LSM2-210ENST00000470086 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.96□□□□□ -0.82
LSM2-210ENST00000470086 TNKSO95271 1327 aa9.96□□□□□ -0.82
LSM2-210ENST00000470086 LOXHD1Q8IVV2 1947 aa9.95□□□□□ -0.82
LSM2-210ENST00000470086 KRT37O76014 449 aa9.95□□□□□ -0.82
LSM2-210ENST00000470086 NUDT7P0C024 238 aa9.95□□□□□ -0.82
LSM2-210ENST00000470086 EEF2P13639 858 aaKnown RBP9.95□□□□□ -0.82
LSM2-210ENST00000470086 ALADP13716 330 aa9.95□□□□□ -0.82
LSM2-210ENST00000470086 SLC4A3P48751 1232 aa9.95□□□□□ -0.82
LSM2-210ENST00000470086 DLX2Q07687 328 aaPredicted RBP9.95□□□□□ -0.82
LSM2-210ENST00000470086 RASGRP2Q7LDG7 609 aa9.95□□□□□ -0.82
LSM2-210ENST00000470086 ASCL5Q7RTU5 278 aa9.95□□□□□ -0.82
LSM2-210ENST00000470086 MSL3Q8N5Y2 521 aaKnown RBP9.95□□□□□ -0.82
LSM2-210ENST00000470086 FAM133AQ8N9E0 248 aa9.95□□□□□ -0.82
LSM2-210ENST00000470086 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.95□□□□□ -0.82
LSM2-210ENST00000470086 ABHD16BQ9H3Z7 469 aa9.95□□□□□ -0.82
LSM2-210ENST00000470086 CACNA1BQ00975 2339 aa9.95□□□□□ -0.82
LSM2-210ENST00000470086 ZNF316A6NFI3 1004 aaPredicted RBP9.94□□□□□ -0.82
LSM2-210ENST00000470086 PRKAB2O43741 272 aa9.94□□□□□ -0.82
LSM2-210ENST00000470086 LTBRP36941 435 aa9.94□□□□□ -0.82
LSM2-210ENST00000470086 TNFAIP2Q03169 654 aa9.94□□□□□ -0.82
LSM2-210ENST00000470086 CLUL1Q15846 466 aa9.94□□□□□ -0.82
LSM2-210ENST00000470086 TAPT1Q6NXT6 567 aa9.94□□□□□ -0.82
LSM2-210ENST00000470086 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.94□□□□□ -0.82
LSM2-210ENST00000470086 TTC6Q86TZ1 520 aa9.94□□□□□ -0.82
LSM2-210ENST00000470086 DHX38Q92620 1227 aaKnown RBP9.94□□□□□ -0.82
LSM2-210ENST00000470086 TEX13BQ9BXU2 312 aa9.94□□□□□ -0.82
LSM2-210ENST00000470086 RAVER2Q9HCJ3 691 aaKnown RBP9.94□□□□□ -0.82
LSM2-210ENST00000470086 DCP1AQ9NPI6 582 aaPredicted RBP9.94□□□□□ -0.82
LSM2-210ENST00000470086 SMC4Q9NTJ3 1288 aa9.94□□□□□ -0.82
LSM2-210ENST00000470086 MCM9Q9NXL9 1143 aa9.94□□□□□ -0.82
LSM2-210ENST00000470086 ZNF292O60281 2723 aa9.93□□□□□ -0.82
LSM2-210ENST00000470086 TCRBV5S4A2TA0A5A2 114 aa9.93□□□□□ -0.82
LSM2-210ENST00000470086 POLR3DP05423 398 aaPredicted RBP9.93□□□□□ -0.82
LSM2-210ENST00000470086 IQCF3P0C7M6 154 aa9.93□□□□□ -0.82
LSM2-210ENST00000470086 ERVK-21P61565 698 aa9.93□□□□□ -0.82
LSM2-210ENST00000470086 CAMK2BQ13554 666 aa9.93□□□□□ -0.82
LSM2-210ENST00000470086 VARS2Q5ST30 1063 aaKnown RBP9.93□□□□□ -0.82
LSM2-210ENST00000470086 FAM117BQ6P1L5 589 aa9.93□□□□□ -0.82
LSM2-210ENST00000470086 EEPD1Q7L9B9 569 aa9.93□□□□□ -0.82
LSM2-210ENST00000470086 RPUSD2Q8IZ73 545 aaKnown RBP9.93□□□□□ -0.82
LSM2-210ENST00000470086 CPXCR1Q8N123 301 aa9.93□□□□□ -0.82
LSM2-210ENST00000470086 CCDC8Q9H0W5 538 aaPredicted RBP9.93□□□□□ -0.82
LSM2-210ENST00000470086 HOMER2Q9NSB8 354 aa9.93□□□□□ -0.82
LSM2-210ENST00000470086 NOB1Q9ULX3 412 aaKnown RBP9.93□□□□□ -0.82
LSM2-210ENST00000470086 FAM186AA6NE01 2351 aa9.93□□□□□ -0.82
LSM2-210ENST00000470086 MYH6P13533 1939 aa9.92□□□□□ -0.82
LSM2-210ENST00000470086 GVINP1Q7Z2Y8 2422 aa9.92□□□□□ -0.82
LSM2-210ENST00000470086 DYNC1LI2O43237 492 aaPredicted RBP9.92□□□□□ -0.82
LSM2-210ENST00000470086 RAD21O60216 631 aa9.92□□□□□ -0.82
LSM2-210ENST00000470086 TBX10O75333 385 aa9.92□□□□□ -0.82
LSM2-210ENST00000470086 PFKMP08237 780 aa9.92□□□□□ -0.82
LSM2-210ENST00000470086 ARP10275 920 aa9.92□□□□□ -0.82
LSM2-210ENST00000470086 GTF2F1P35269 517 aaKnown RBP eCLIP9.92□□□□□ -0.82
LSM2-210ENST00000470086 PURAQ00577 322 aaKnown RBP9.92□□□□□ -0.82
LSM2-210ENST00000470086 COL19A1Q14993 1142 aa9.92□□□□□ -0.82
LSM2-210ENST00000470086 TCEAL5Q5H9L2 206 aa9.92□□□□□ -0.82
LSM2-210ENST00000470086 PHOSPHO2Q8TCD6 241 aa9.92□□□□□ -0.82
LSM2-210ENST00000470086 WNT8BQ93098 351 aa9.92□□□□□ -0.82
LSM2-210ENST00000470086 DDX11Q96FC9 970 aa9.92□□□□□ -0.82
LSM2-210ENST00000470086 SLF1Q9BQI6 1058 aa9.92□□□□□ -0.82
LSM2-210ENST00000470086 SPC25Q9HBM1 224 aa9.92□□□□□ -0.82
LSM2-210ENST00000470086 ARHGEF10LQ9HCE6 1279 aa9.92□□□□□ -0.82
LSM2-210ENST00000470086 MRS2Q9HD23 443 aa9.92□□□□□ -0.82
LSM2-210ENST00000470086 A1CFQ9NQ94 594 aaKnown RBP9.92□□□□□ -0.82
LSM2-210ENST00000470086 NBNO60934 754 aa9.91□□□□□ -0.82
LSM2-210ENST00000470086 NDUFB10O96000 172 aa9.91□□□□□ -0.82
LSM2-210ENST00000470086 PDE6AP16499 860 aa9.91□□□□□ -0.82
LSM2-210ENST00000470086 CDK8P49336 464 aa9.91□□□□□ -0.82
LSM2-210ENST00000470086 PTPN5P54829 565 aa9.91□□□□□ -0.82
LSM2-210ENST00000470086 MBTPS1Q14703 1052 aa9.91□□□□□ -0.82
LSM2-210ENST00000470086 HERC4Q5GLZ8 1057 aaPredicted RBP9.91□□□□□ -0.82
LSM2-210ENST00000470086 RNF135Q8IUD6 432 aa9.91□□□□□ -0.82
LSM2-210ENST00000470086 ADHFE1Q8IWW8 467 aa9.91□□□□□ -0.82
LSM2-210ENST00000470086 EAF2Q96CJ1 260 aaPredicted RBP9.91□□□□□ -0.82
LSM2-210ENST00000470086 ZNF512BQ96KM6 892 aaPredicted RBP9.91□□□□□ -0.82
LSM2-210ENST00000470086 OSBPL7Q9BZF2 842 aa9.91□□□□□ -0.82
LSM2-210ENST00000470086 ARMT1Q9H993 441 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms