RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 LINC01553A4QN01 128 aa14.36□□□□□ -0.11
LSM2-209ENST00000470083 C19orf67A6NJJ6 358 aa14.36□□□□□ -0.11
LSM2-209ENST00000470083 H3BQ06 376 aaPredicted RBP14.36□□□□□ -0.11
LSM2-209ENST00000470083 MYL3P08590 195 aa14.36□□□□□ -0.11
LSM2-209ENST00000470083 RASA1P20936 1047 aa14.36□□□□□ -0.11
LSM2-209ENST00000470083 DEFB103AP81534 67 aa14.36□□□□□ -0.11
LSM2-209ENST00000470083 TKFCQ3LXA3 575 aa14.36□□□□□ -0.11
LSM2-209ENST00000470083 ERC1Q8IUD2 1116 aa14.36□□□□□ -0.11
LSM2-209ENST00000470083 RPAP2Q8IXW5 612 aaPredicted RBP14.36□□□□□ -0.11
LSM2-209ENST00000470083 MORC4Q8TE76 937 aa14.36□□□□□ -0.11
LSM2-209ENST00000470083 DNAJC2Q99543 621 aaKnown RBP14.36□□□□□ -0.11
LSM2-209ENST00000470083 UPF3BQ9BZI7 483 aaKnown RBP14.36□□□□□ -0.11
LSM2-209ENST00000470083 GPHNQ9NQX3 736 aaPredicted RBP14.36□□□□□ -0.11
LSM2-209ENST00000470083 CLIP2Q9UDT6 1046 aa14.36□□□□□ -0.11
LSM2-209ENST00000470083 SYNPO2Q9UMS6 1093 aa14.36□□□□□ -0.11
LSM2-209ENST00000470083 C5orf42Q9H799 3197 aa14.35□□□□□ -0.11
LSM2-209ENST00000470083 ADD2P35612 726 aa14.35□□□□□ -0.11
LSM2-209ENST00000470083 PTPN5P54829 565 aa14.35□□□□□ -0.11
LSM2-209ENST00000470083 PTPN11Q06124 597 aaPredicted RBP14.35□□□□□ -0.11
LSM2-209ENST00000470083 SLFNL1Q499Z3 407 aa14.35□□□□□ -0.11
LSM2-209ENST00000470083 ADHFE1Q8IWW8 467 aa14.35□□□□□ -0.11
LSM2-209ENST00000470083 TMEM57Q8N5G2 664 aa14.35□□□□□ -0.11
LSM2-209ENST00000470083 GMCL1P1Q8NEA9 526 aa14.35□□□□□ -0.11
LSM2-209ENST00000470083 MRPL38Q96DV4 380 aaKnown RBP14.35□□□□□ -0.11
LSM2-209ENST00000470083 C1orf115Q9H7X2 142 aa14.35□□□□□ -0.11
LSM2-209ENST00000470083 ARPP21Q9UBL0 812 aaPredicted RBP14.35□□□□□ -0.11
LSM2-209ENST00000470083 NOD1Q9Y239 953 aa14.35□□□□□ -0.11
LSM2-209ENST00000470083 SCN5AQ14524 2016 aa14.35□□□□□ -0.11
LSM2-209ENST00000470083 MYH8P13535 1937 aa14.35□□□□□ -0.11
LSM2-209ENST00000470083 IGKV6D-41A0A0C4DH26 115 aa14.34□□□□□ -0.11
LSM2-209ENST00000470083 C1QBPQ07021 282 aaKnown RBP14.34□□□□□ -0.11
LSM2-209ENST00000470083 GPNMBQ14956 572 aa14.34□□□□□ -0.11
LSM2-209ENST00000470083 COL19A1Q14993 1142 aa14.34□□□□□ -0.11
LSM2-209ENST00000470083 TIGD5Q53EQ6 642 aa14.34□□□□□ -0.11
LSM2-209ENST00000470083 BRDTQ58F21 947 aaPredicted RBP14.34□□□□□ -0.11
LSM2-209ENST00000470083 CNKSR3Q6P9H4 555 aa14.34□□□□□ -0.11
LSM2-209ENST00000470083 FBXO22Q8NEZ5 403 aa14.34□□□□□ -0.11
LSM2-209ENST00000470083 PRSS33Q8NF86 280 aa14.34□□□□□ -0.11
LSM2-209ENST00000470083 CAGE1Q8TC20 777 aa14.34□□□□□ -0.11
LSM2-209ENST00000470083 AFAP1L1Q8TED9 768 aa14.34□□□□□ -0.11
LSM2-209ENST00000470083 FRAT1Q92837 279 aaPredicted RBP14.34□□□□□ -0.11
LSM2-209ENST00000470083 MKL1Q969V6 931 aa14.34□□□□□ -0.11
LSM2-209ENST00000470083 TRERF1Q96PN7 1200 aa14.34□□□□□ -0.11
LSM2-209ENST00000470083 WDR11Q9BZH6 1224 aa14.34□□□□□ -0.11
LSM2-209ENST00000470083 CYP39A1Q9NYL5 469 aa14.34□□□□□ -0.11
LSM2-209ENST00000470083 CTNNA3Q9UI47 895 aa14.34□□□□□ -0.11
LSM2-209ENST00000470083 SLC4A4Q9Y6R1 1079 aa14.34□□□□□ -0.11
LSM2-209ENST00000470083 ABHD14A-ACY1A0A1B0GW23 586 aa14.33□□□□□ -0.12
LSM2-209ENST00000470083 KPNA6O60684 536 aa14.33□□□□□ -0.12
LSM2-209ENST00000470083 PARNO95453 639 aaKnown RBP14.33□□□□□ -0.12
LSM2-209ENST00000470083 BMP3P12645 472 aa14.33□□□□□ -0.12
LSM2-209ENST00000470083 IRS1P35568 1242 aa14.33□□□□□ -0.12
LSM2-209ENST00000470083 STAT2P52630 851 aa14.33□□□□□ -0.12
LSM2-209ENST00000470083 PTPROQ16827 1216 aa14.33□□□□□ -0.12
LSM2-209ENST00000470083 HERC4Q5GLZ8 1057 aaPredicted RBP14.33□□□□□ -0.12
LSM2-209ENST00000470083 CCDC155Q8N6L0 562 aa14.33□□□□□ -0.12
LSM2-209ENST00000470083 OR6J1Q8NGC5 347 aa14.33□□□□□ -0.12
LSM2-209ENST00000470083 PABPC5Q96DU9 382 aaKnown RBP14.33□□□□□ -0.12
LSM2-209ENST00000470083 PRRX2Q99811 253 aa14.33□□□□□ -0.12
LSM2-209ENST00000470083 MKNK2Q9HBH9 465 aa14.33□□□□□ -0.12
LSM2-209ENST00000470083 CACNA1HO95180 2353 aa14.33□□□□□ -0.12
LSM2-209ENST00000470083 RAD50Q92878 1312 aa14.33□□□□□ -0.12
LSM2-209ENST00000470083 TET1Q8NFU7 2136 aa14.33□□□□□ -0.12
LSM2-209ENST00000470083 GREB1LQ9C091 1923 aaPredicted RBP14.33□□□□□ -0.12
LSM2-209ENST00000470083 ZFHX2Q9C0A1 2572 aaPredicted RBP14.32□□□□□ -0.12
LSM2-209ENST00000470083 TANC1Q9C0D5 1861 aa14.32□□□□□ -0.12
LSM2-209ENST00000470083 RBM47A0AV96 593 aaKnown RBP14.32□□□□□ -0.12
LSM2-209ENST00000470083 TMEM232C9JQI7 657 aa14.32□□□□□ -0.12
LSM2-209ENST00000470083 EFCAB14O75071 495 aa14.32□□□□□ -0.12
LSM2-209ENST00000470083 CXCL10P02778 98 aa14.32□□□□□ -0.12
LSM2-209ENST00000470083 ALAS1P13196 640 aa14.32□□□□□ -0.12
LSM2-209ENST00000470083 PPP1R13LQ8WUF5 828 aa14.32□□□□□ -0.12
LSM2-209ENST00000470083 CRBNQ96SW2 442 aa14.32□□□□□ -0.12
LSM2-209ENST00000470083 C17orf80Q9BSJ5 609 aa14.32□□□□□ -0.12
LSM2-209ENST00000470083 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.32□□□□□ -0.12
LSM2-209ENST00000470083 IL1RAPL2Q9NP60 686 aa14.32□□□□□ -0.12
LSM2-209ENST00000470083 MTMR4Q9NYA4 1195 aa14.32□□□□□ -0.12
LSM2-209ENST00000470083 EXOC6BQ9Y2D4 811 aa14.32□□□□□ -0.12
LSM2-209ENST00000470083 SCN10AQ9Y5Y9 1956 aa14.32□□□□□ -0.12
LSM2-209ENST00000470083 LOC102724159A0A0B4J2E5 919 aa14.31□□□□□ -0.12
LSM2-209ENST00000470083 A6NJR5 290 aa14.31□□□□□ -0.12
LSM2-209ENST00000470083 TTLL1O95922 423 aa14.31□□□□□ -0.12
LSM2-209ENST00000470083 SELPP16109 830 aa14.31□□□□□ -0.12
LSM2-209ENST00000470083 PWP2Q15269 919 aaKnown RBP14.31□□□□□ -0.12
LSM2-209ENST00000470083 UBE3CQ15386 1083 aa14.31□□□□□ -0.12
LSM2-209ENST00000470083 PTGISQ16647 500 aa14.31□□□□□ -0.12
LSM2-209ENST00000470083 SBK1Q52WX2 424 aa14.31□□□□□ -0.12
LSM2-209ENST00000470083 MUM1L1Q5H9M0 696 aa14.31□□□□□ -0.12
LSM2-209ENST00000470083 SLFN13Q68D06 897 aa14.31□□□□□ -0.12
LSM2-209ENST00000470083 LRRC8DQ7L1W4 858 aa14.31□□□□□ -0.12
LSM2-209ENST00000470083 BMP8AQ7Z5Y6 402 aa14.31□□□□□ -0.12
LSM2-209ENST00000470083 FAM160B2Q86V87 743 aa14.31□□□□□ -0.12
LSM2-209ENST00000470083 LRRC47Q8N1G4 583 aaKnown RBP14.31□□□□□ -0.12
LSM2-209ENST00000470083 BANK1Q8NDB2 785 aa14.31□□□□□ -0.12
LSM2-209ENST00000470083 CHURC1Q8WUH1 139 aa14.31□□□□□ -0.12
LSM2-209ENST00000470083 CEP95Q96GE4 821 aa14.31□□□□□ -0.12
LSM2-209ENST00000470083 CTAGE1Q96RT6 745 aa14.31□□□□□ -0.12
LSM2-209ENST00000470083 POP1Q99575 1024 aaKnown RBP14.31□□□□□ -0.12
LSM2-209ENST00000470083 PAG1Q9NWQ8 432 aa14.31□□□□□ -0.12
LSM2-209ENST00000470083 MUTYHQ9UIF7 546 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms