RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 RCCD1A6NED2 376 aa15.25■□□□□ 0.03
BRCA1-209ENST00000470026 hCG_1984214I3L0E3 225 aa15.25■□□□□ 0.03
BRCA1-209ENST00000470026 GNPATO15228 680 aa15.25■□□□□ 0.03
BRCA1-209ENST00000470026 KRT86O43790 486 aa15.25■□□□□ 0.03
BRCA1-209ENST00000470026 CCNT1O60563 726 aaKnown RBP15.25■□□□□ 0.03
BRCA1-209ENST00000470026 HOXA7P31268 230 aaPredicted RBP15.25■□□□□ 0.03
BRCA1-209ENST00000470026 LETM2Q2VYF4 491 aa15.25■□□□□ 0.03
BRCA1-209ENST00000470026 CNNM4Q6P4Q7 775 aa15.25■□□□□ 0.03
BRCA1-209ENST00000470026 PTF1AQ7RTS3 328 aa15.25■□□□□ 0.03
BRCA1-209ENST00000470026 ZNF804AQ7Z570 1209 aa15.25■□□□□ 0.03
BRCA1-209ENST00000470026 AMIGO3Q86WK7 504 aa15.25■□□□□ 0.03
BRCA1-209ENST00000470026 MAPKAPK5Q8IW41 473 aa15.25■□□□□ 0.03
BRCA1-209ENST00000470026 ZNF713Q8N859 430 aaPredicted RBP15.25■□□□□ 0.03
BRCA1-209ENST00000470026 NEK11Q8NG66 645 aa15.25■□□□□ 0.03
BRCA1-209ENST00000470026 ARHGEF1Q92888 912 aaKnown RBP15.25■□□□□ 0.03
BRCA1-209ENST00000470026 JAKMIP2Q96AA8 810 aa15.25■□□□□ 0.03
BRCA1-209ENST00000470026 FAM163AQ96GL9 167 aaPredicted RBP15.25■□□□□ 0.03
BRCA1-209ENST00000470026 RIOX1Q9H6W3 641 aa15.25■□□□□ 0.03
BRCA1-209ENST00000470026 VIPAS39Q9H9C1 493 aa15.25■□□□□ 0.03
BRCA1-209ENST00000470026 NHEJ1Q9H9Q4 299 aaPredicted RBP15.25■□□□□ 0.03
BRCA1-209ENST00000470026 TAF1LQ8IZX4 1826 aa15.25■□□□□ 0.03
BRCA1-209ENST00000470026 TARSL2A2RTX5 802 aaKnown RBP15.25■□□□□ 0.03
BRCA1-209ENST00000470026 FCER1AP12319 257 aa15.25■□□□□ 0.03
BRCA1-209ENST00000470026 TRIM21P19474 475 aaKnown RBP15.25■□□□□ 0.03
BRCA1-209ENST00000470026 ASIC1P78348 528 aa15.25■□□□□ 0.03
BRCA1-209ENST00000470026 MCM6Q14566 821 aa15.25■□□□□ 0.03
BRCA1-209ENST00000470026 FOXR2Q6PJQ5 311 aa15.25■□□□□ 0.03
BRCA1-209ENST00000470026 RRP36Q96EU6 259 aaKnown RBP15.25■□□□□ 0.03
BRCA1-209ENST00000470026 LACRTQ9GZZ8 138 aa15.25■□□□□ 0.03
BRCA1-209ENST00000470026 SEMA6BQ9H3T3 888 aa15.25■□□□□ 0.03
BRCA1-209ENST00000470026 SUGCTQ9HAC7 445 aa15.25■□□□□ 0.03
BRCA1-209ENST00000470026 BLOC1S4Q9NUP1 217 aa15.25■□□□□ 0.03
BRCA1-209ENST00000470026 ANKIB1Q9P2G1 1089 aa15.25■□□□□ 0.03
BRCA1-209ENST00000470026 STK17AQ9UEE5 414 aa15.25■□□□□ 0.03
BRCA1-209ENST00000470026 RTCBQ9Y3I0 505 aaKnown RBP15.25■□□□□ 0.03
BRCA1-209ENST00000470026 NHSQ6T4R5 1651 aa15.25■□□□□ 0.03
BRCA1-209ENST00000470026 PLIN4Q96Q06 1357 aa15.24■□□□□ 0.03
BRCA1-209ENST00000470026 FOCADQ5VW36 1801 aa15.24■□□□□ 0.03
BRCA1-209ENST00000470026 PVALEFA0A1B0GWK0 134 aa15.24■□□□□ 0.03
BRCA1-209ENST00000470026 KLK7P49862 253 aa15.24■□□□□ 0.03
BRCA1-209ENST00000470026 FXR2P51116 673 aaKnown RBP eCLIP15.24■□□□□ 0.03
BRCA1-209ENST00000470026 GRB10Q13322 594 aa15.24■□□□□ 0.03
BRCA1-209ENST00000470026 NFIXQ14938 502 aa15.24■□□□□ 0.03
BRCA1-209ENST00000470026 SLC51AQ86UW1 340 aa15.24■□□□□ 0.03
BRCA1-209ENST00000470026 NOC4LQ9BVI4 516 aaKnown RBP15.24■□□□□ 0.03
BRCA1-209ENST00000470026 CPVLQ9H3G5 476 aa15.24■□□□□ 0.03
BRCA1-209ENST00000470026 ZNHIT6Q9NWK9 470 aaKnown RBP15.24■□□□□ 0.03
BRCA1-209ENST00000470026 HDAC6Q9UBN7 1215 aa15.24■□□□□ 0.03
BRCA1-209ENST00000470026 SAP30BPQ9UHR5 308 aaKnown RBP15.24■□□□□ 0.03
BRCA1-209ENST00000470026 TULP2O00295 520 aa15.23■□□□□ 0.03
BRCA1-209ENST00000470026 ENC1O14682 589 aa15.23■□□□□ 0.03
BRCA1-209ENST00000470026 EDIL3O43854 480 aa15.23■□□□□ 0.03
BRCA1-209ENST00000470026 IL1R1P14778 569 aa15.23■□□□□ 0.03
BRCA1-209ENST00000470026 BTDP43251 543 aa15.23■□□□□ 0.03
BRCA1-209ENST00000470026 RHBDL3P58872 404 aa15.23■□□□□ 0.03
BRCA1-209ENST00000470026 CKAP4Q07065 602 aaKnown RBP15.23■□□□□ 0.03
BRCA1-209ENST00000470026 FAM98CQ17RN3 349 aaKnown RBP15.23■□□□□ 0.03
BRCA1-209ENST00000470026 USP17L2Q6R6M4 530 aa15.23■□□□□ 0.03
BRCA1-209ENST00000470026 TBCKQ8TEA7 893 aa15.23■□□□□ 0.03
BRCA1-209ENST00000470026 MMS19Q96T76 1030 aa15.23■□□□□ 0.03
BRCA1-209ENST00000470026 PLAGL2Q9UPG8 496 aa15.23■□□□□ 0.03
BRCA1-209ENST00000470026 SIK3Q9Y2K2 1263 aa15.23■□□□□ 0.03
BRCA1-209ENST00000470026 LY75O60449 1722 aa15.23■□□□□ 0.03
BRCA1-209ENST00000470026 PES1O00541 588 aaKnown RBP15.23■□□□□ 0.03
BRCA1-209ENST00000470026 LCA5LO95447 670 aa15.23■□□□□ 0.03
BRCA1-209ENST00000470026 PLCG2P16885 1265 aa15.23■□□□□ 0.03
BRCA1-209ENST00000470026 MCM3P25205 808 aa15.23■□□□□ 0.03
BRCA1-209ENST00000470026 TECP42680 631 aa15.23■□□□□ 0.03
BRCA1-209ENST00000470026 VAV2P52735 878 aa15.23■□□□□ 0.03
BRCA1-209ENST00000470026 UNC13DQ70J99 1090 aa15.23■□□□□ 0.03
BRCA1-209ENST00000470026 KIAA1328Q86T90 577 aa15.23■□□□□ 0.03
BRCA1-209ENST00000470026 CALML4Q96GE6 196 aa15.23■□□□□ 0.03
BRCA1-209ENST00000470026 PNMA5Q96PV4 448 aa15.23■□□□□ 0.03
BRCA1-209ENST00000470026 CD209Q9NNX6 404 aa15.23■□□□□ 0.03
BRCA1-209ENST00000470026 TFR2Q9UP52 801 aa15.23■□□□□ 0.03
BRCA1-209ENST00000470026 GAKO14976 1311 aa15.22■□□□□ 0.03
BRCA1-209ENST00000470026 LRRIQ3A6PVS8 624 aaPredicted RBP15.22■□□□□ 0.03
BRCA1-209ENST00000470026 ZNF263O14978 683 aa15.22■□□□□ 0.03
BRCA1-209ENST00000470026 NKRFO15226 690 aaKnown RBP eCLIP15.22■□□□□ 0.03
BRCA1-209ENST00000470026 MTIF2P46199 727 aaKnown RBP15.22■□□□□ 0.03
BRCA1-209ENST00000470026 AARSP49588 968 aaKnown RBP eCLIP15.22■□□□□ 0.03
BRCA1-209ENST00000470026 GYS2P54840 703 aa15.22■□□□□ 0.03
BRCA1-209ENST00000470026 EHHADHQ08426 723 aa15.22■□□□□ 0.03
BRCA1-209ENST00000470026 SOGA3Q5TF21 947 aa15.22■□□□□ 0.03
BRCA1-209ENST00000470026 REXO1Q8N1G1 1221 aaKnown RBP15.22■□□□□ 0.03
BRCA1-209ENST00000470026 FAM71BQ8TC56 605 aa15.22■□□□□ 0.03
BRCA1-209ENST00000470026 CEP95Q96GE4 821 aa15.22■□□□□ 0.03
BRCA1-209ENST00000470026 PIGSQ96S52 555 aa15.22■□□□□ 0.03
BRCA1-209ENST00000470026 TSGA10Q9BZW7 698 aa15.22■□□□□ 0.03
BRCA1-209ENST00000470026 MED4Q9NPJ6 270 aa15.22■□□□□ 0.03
BRCA1-209ENST00000470026 NUTM2BA6NNL0 878 aaPredicted RBP15.22■□□□□ 0.03
BRCA1-209ENST00000470026 NUTM2EB1AL46 878 aaPredicted RBP15.22■□□□□ 0.03
BRCA1-209ENST00000470026 FKBP15Q5T1M5 1219 aa15.22■□□□□ 0.03
BRCA1-209ENST00000470026 SV2BQ7L1I2 683 aa15.22■□□□□ 0.03
BRCA1-209ENST00000470026 ZNF572Q7Z3I7 529 aaPredicted RBP15.22■□□□□ 0.03
BRCA1-209ENST00000470026 POTEDQ86YR6 584 aa15.22■□□□□ 0.03
BRCA1-209ENST00000470026 GUF1Q8N442 669 aaKnown RBP15.22■□□□□ 0.03
BRCA1-209ENST00000470026 SEC63Q9UGP8 760 aaKnown RBP15.22■□□□□ 0.03
BRCA1-209ENST00000470026 MTMR7Q9Y216 660 aa15.22■□□□□ 0.03
BRCA1-209ENST00000470026 C10orf71Q711Q0 1435 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms