RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 PKD1L2Q7Z442 2459 aa13.63□□□□□ -0.23
COMMD2-202ENST00000469896 H0Y858 1186 aa13.63□□□□□ -0.23
COMMD2-202ENST00000469896 DYNC1LI2O43237 492 aaPredicted RBP13.63□□□□□ -0.23
COMMD2-202ENST00000469896 KDM4AO75164 1064 aa13.63□□□□□ -0.23
COMMD2-202ENST00000469896 PLCD1P51178 756 aa13.63□□□□□ -0.23
COMMD2-202ENST00000469896 LRRFIP1Q32MZ4 808 aaKnown RBP13.63□□□□□ -0.23
COMMD2-202ENST00000469896 MIGA1Q8NAN2 632 aa13.63□□□□□ -0.23
COMMD2-202ENST00000469896 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.63□□□□□ -0.23
COMMD2-202ENST00000469896 TLR9Q9NR96 1032 aa13.63□□□□□ -0.23
COMMD2-202ENST00000469896 SNRKQ9NRH2 765 aa13.63□□□□□ -0.23
COMMD2-202ENST00000469896 CDK5RAP2Q96SN8 1893 aa13.63□□□□□ -0.23
COMMD2-202ENST00000469896 ASTN1O14525 1302 aa13.63□□□□□ -0.23
COMMD2-202ENST00000469896 KMT2BQ9UMN6 2715 aaPredicted RBP13.63□□□□□ -0.23
COMMD2-202ENST00000469896 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.62□□□□□ -0.23
COMMD2-202ENST00000469896 STXBP3O00186 592 aa13.62□□□□□ -0.23
COMMD2-202ENST00000469896 SLC4A3P48751 1232 aa13.62□□□□□ -0.23
COMMD2-202ENST00000469896 ZXDAP98168 799 aa13.62□□□□□ -0.23
COMMD2-202ENST00000469896 COL19A1Q14993 1142 aa13.62□□□□□ -0.23
COMMD2-202ENST00000469896 FAM47CQ5HY64 1035 aa13.62□□□□□ -0.23
COMMD2-202ENST00000469896 TTC39AQ5SRH9 613 aa13.62□□□□□ -0.23
COMMD2-202ENST00000469896 TMCO2Q7Z6W1 182 aaPredicted RBP13.62□□□□□ -0.23
COMMD2-202ENST00000469896 CCDC155Q8N6L0 562 aa13.62□□□□□ -0.23
COMMD2-202ENST00000469896 REPS2Q8NFH8 660 aa13.62□□□□□ -0.23
COMMD2-202ENST00000469896 PTCD2Q8WV60 388 aaKnown RBP13.62□□□□□ -0.23
COMMD2-202ENST00000469896 NSUN3Q9H649 340 aaKnown RBP13.62□□□□□ -0.23
COMMD2-202ENST00000469896 GOPCQ9HD26 462 aa13.62□□□□□ -0.23
COMMD2-202ENST00000469896 POLR3EQ9NVU0 708 aa13.62□□□□□ -0.23
COMMD2-202ENST00000469896 FBXO40Q9UH90 709 aa13.62□□□□□ -0.23
COMMD2-202ENST00000469896 LHX6Q9UPM6 363 aa13.62□□□□□ -0.23
COMMD2-202ENST00000469896 NOD1Q9Y239 953 aa13.62□□□□□ -0.23
COMMD2-202ENST00000469896 Q9Y3F1 56 aa13.62□□□□□ -0.23
COMMD2-202ENST00000469896 CTDP1Q9Y5B0 961 aaPredicted RBP13.62□□□□□ -0.23
COMMD2-202ENST00000469896 BAHCC1Q9P281 2608 aa13.62□□□□□ -0.23
COMMD2-202ENST00000469896 ACACBO00763 2458 aa13.61□□□□□ -0.23
COMMD2-202ENST00000469896 RAD21O60216 631 aa13.61□□□□□ -0.23
COMMD2-202ENST00000469896 EFCAB14O75071 495 aa13.61□□□□□ -0.23
COMMD2-202ENST00000469896 AVPR2P30518 371 aa13.61□□□□□ -0.23
COMMD2-202ENST00000469896 GABPAQ06546 454 aa13.61□□□□□ -0.23
COMMD2-202ENST00000469896 DSG2Q14126 1118 aa13.61□□□□□ -0.23
COMMD2-202ENST00000469896 TCEAL5Q5H9L2 206 aa13.61□□□□□ -0.23
COMMD2-202ENST00000469896 CCDC158Q5M9N0 1113 aa13.61□□□□□ -0.23
COMMD2-202ENST00000469896 DGLUCYQ7Z3D6 616 aa13.61□□□□□ -0.23
COMMD2-202ENST00000469896 PLPP6Q8IY26 295 aa13.61□□□□□ -0.23
COMMD2-202ENST00000469896 SAMD11Q96NU1 681 aa13.61□□□□□ -0.23
COMMD2-202ENST00000469896 KATNBL1Q9H079 304 aa13.61□□□□□ -0.23
COMMD2-202ENST00000469896 ALG13Q9NP73 1137 aaKnown RBP13.61□□□□□ -0.23
COMMD2-202ENST00000469896 ABHD14A-ACY1A0A1B0GW23 586 aa13.6□□□□□ -0.23
COMMD2-202ENST00000469896 MED19A0JLT2 244 aaPredicted RBP13.6□□□□□ -0.23
COMMD2-202ENST00000469896 ASB14A6NK59 587 aa13.6□□□□□ -0.23
COMMD2-202ENST00000469896 NBL1P41271 181 aa13.6□□□□□ -0.23
COMMD2-202ENST00000469896 VCPP55072 806 aaKnown RBP13.6□□□□□ -0.23
COMMD2-202ENST00000469896 DEFB103AP81534 67 aa13.6□□□□□ -0.23
COMMD2-202ENST00000469896 SIGLEC14Q08ET2 396 aa13.6□□□□□ -0.23
COMMD2-202ENST00000469896 SMAD4Q13485 552 aaKnown RBP13.6□□□□□ -0.23
COMMD2-202ENST00000469896 MCTP2Q6DN12 878 aa13.6□□□□□ -0.23
COMMD2-202ENST00000469896 NKD2Q969F2 451 aaPredicted RBP13.6□□□□□ -0.23
COMMD2-202ENST00000469896 SLF1Q9BQI6 1058 aa13.6□□□□□ -0.23
COMMD2-202ENST00000469896 C17orf80Q9BSJ5 609 aa13.6□□□□□ -0.23
COMMD2-202ENST00000469896 SWAP70Q9UH65 585 aa13.6□□□□□ -0.23
COMMD2-202ENST00000469896 INSL6Q9Y581 213 aa13.6□□□□□ -0.23
COMMD2-202ENST00000469896 MYH1P12882 1939 aa13.6□□□□□ -0.23
COMMD2-202ENST00000469896 MBTPS2O43462 519 aa13.59□□□□□ -0.23
COMMD2-202ENST00000469896 PARNO95453 639 aaKnown RBP13.59□□□□□ -0.23
COMMD2-202ENST00000469896 CYP2E1P05181 493 aaPredicted RBP13.59□□□□□ -0.23
COMMD2-202ENST00000469896 SMPD1P17405 629 aa13.59□□□□□ -0.23
COMMD2-202ENST00000469896 CLUL1Q15846 466 aa13.59□□□□□ -0.23
COMMD2-202ENST00000469896 IQSEC1Q6DN90 963 aa13.59□□□□□ -0.23
COMMD2-202ENST00000469896 CNKSR3Q6P9H4 555 aa13.59□□□□□ -0.23
COMMD2-202ENST00000469896 TMED8Q6PL24 325 aaPredicted RBP13.59□□□□□ -0.23
COMMD2-202ENST00000469896 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.59□□□□□ -0.23
COMMD2-202ENST00000469896 RPAINQ86UA6 219 aa13.59□□□□□ -0.23
COMMD2-202ENST00000469896 ADSSL1Q8N142 457 aa13.59□□□□□ -0.23
COMMD2-202ENST00000469896 MRPL50Q8N5N7 158 aaKnown RBP13.59□□□□□ -0.23
COMMD2-202ENST00000469896 FGD4Q96M96 766 aa13.59□□□□□ -0.23
COMMD2-202ENST00000469896 PRKRIP1Q9H875 184 aaPredicted RBP13.59□□□□□ -0.23
COMMD2-202ENST00000469896 RIPK3Q9Y572 518 aa13.59□□□□□ -0.23
COMMD2-202ENST00000469896 ATRXP46100 2492 aa13.58□□□□□ -0.23
COMMD2-202ENST00000469896 ATP2A1O14983 1001 aa13.58□□□□□ -0.24
COMMD2-202ENST00000469896 SRGAP3O43295 1099 aa13.58□□□□□ -0.24
COMMD2-202ENST00000469896 ZBED4O75132 1171 aa13.58□□□□□ -0.24
COMMD2-202ENST00000469896 IDH1O75874 414 aaKnown RBP13.58□□□□□ -0.24
COMMD2-202ENST00000469896 CPT1AP50416 773 aa13.58□□□□□ -0.24
COMMD2-202ENST00000469896 DDX10Q13206 875 aaKnown RBP13.58□□□□□ -0.24
COMMD2-202ENST00000469896 BRDTQ58F21 947 aaPredicted RBP13.58□□□□□ -0.24
COMMD2-202ENST00000469896 FAM83BQ5T0W9 1011 aa13.58□□□□□ -0.24
COMMD2-202ENST00000469896 FAM117BQ6P1L5 589 aa13.58□□□□□ -0.24
COMMD2-202ENST00000469896 NFRKBQ6P4R8 1299 aa13.58□□□□□ -0.24
COMMD2-202ENST00000469896 CLEC10AQ8IUN9 316 aa13.58□□□□□ -0.24
COMMD2-202ENST00000469896 SIAH1Q8IUQ4 282 aa13.58□□□□□ -0.24
COMMD2-202ENST00000469896 CPXCR1Q8N123 301 aa13.58□□□□□ -0.24
COMMD2-202ENST00000469896 CHST13Q8NET6 341 aa13.58□□□□□ -0.24
COMMD2-202ENST00000469896 CAGE1Q8TC20 777 aa13.58□□□□□ -0.24
COMMD2-202ENST00000469896 AFAP1L1Q8TED9 768 aa13.58□□□□□ -0.24
COMMD2-202ENST00000469896 MTG1Q9BT17 334 aaPredicted RBP13.58□□□□□ -0.24
COMMD2-202ENST00000469896 MCM9Q9NXL9 1143 aa13.58□□□□□ -0.24
COMMD2-202ENST00000469896 SALL2Q9Y467 1007 aaPredicted RBP13.58□□□□□ -0.24
COMMD2-202ENST00000469896 WDR87Q6ZQQ6 2873 aa13.57□□□□□ -0.24
COMMD2-202ENST00000469896 SCN5AQ14524 2016 aa13.57□□□□□ -0.24
COMMD2-202ENST00000469896 ZFHX4Q86UP3 3567 aa13.57□□□□□ -0.24
COMMD2-202ENST00000469896 USP17L12C9JPN9 530 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms