RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 NHLH1Q02575 133 aa6.45□□□□□ -1.38
PTPN4-209ENST00000469511 GABPAQ06546 454 aa6.45□□□□□ -1.38
PTPN4-209ENST00000469511 TTLL4Q14679 1199 aa6.45□□□□□ -1.38
PTPN4-209ENST00000469511 GORABQ5T7V8 394 aa6.45□□□□□ -1.38
PTPN4-209ENST00000469511 TMEM199Q8N511 208 aa6.45□□□□□ -1.38
PTPN4-209ENST00000469511 REPS2Q8NFH8 660 aa6.45□□□□□ -1.38
PTPN4-209ENST00000469511 ZNF516Q92618 1163 aa6.45□□□□□ -1.38
PTPN4-209ENST00000469511 VTI1AQ96AJ9 217 aa6.45□□□□□ -1.38
PTPN4-209ENST00000469511 DYNLL2Q96FJ2 89 aa6.45□□□□□ -1.38
PTPN4-209ENST00000469511 FGD4Q96M96 766 aa6.45□□□□□ -1.38
PTPN4-209ENST00000469511 FBXL18Q96ME1 805 aa6.45□□□□□ -1.38
PTPN4-209ENST00000469511 NOL10Q9BSC4 688 aaKnown RBP6.45□□□□□ -1.38
PTPN4-209ENST00000469511 MROH8Q9H579 483 aa6.45□□□□□ -1.38
PTPN4-209ENST00000469511 ANTXR1Q9H6X2 564 aa6.45□□□□□ -1.38
PTPN4-209ENST00000469511 MRS2Q9HD23 443 aa6.45□□□□□ -1.38
PTPN4-209ENST00000469511 PRDM9Q9NQV7 894 aa6.45□□□□□ -1.38
PTPN4-209ENST00000469511 HOXC10Q9NYD6 342 aa6.45□□□□□ -1.38
PTPN4-209ENST00000469511 MAP10Q9P2G4 905 aa6.45□□□□□ -1.38
PTPN4-209ENST00000469511 HCSTQ9UBK5 93 aa6.45□□□□□ -1.38
PTPN4-209ENST00000469511 FKBPLQ9UIM3 349 aa6.45□□□□□ -1.38
PTPN4-209ENST00000469511 SERPINB13Q9UIV8 391 aa6.45□□□□□ -1.38
PTPN4-209ENST00000469511 AKAP2Q9Y2D5 859 aa6.45□□□□□ -1.38
PTPN4-209ENST00000469511 RIPK3Q9Y572 518 aa6.45□□□□□ -1.38
PTPN4-209ENST00000469511 ZNF521Q96K83 1311 aa6.45□□□□□ -1.38
PTPN4-209ENST00000469511 LCTP09848 1927 aa6.44□□□□□ -1.38
PTPN4-209ENST00000469511 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.44□□□□□ -1.38
PTPN4-209ENST00000469511 POM121CA8CG34 1229 aa6.44□□□□□ -1.38
PTPN4-209ENST00000469511 MPHOSPH10O00566 681 aaKnown RBP6.44□□□□□ -1.38
PTPN4-209ENST00000469511 FLOT1O75955 427 aa6.44□□□□□ -1.38
PTPN4-209ENST00000469511 POU3F3P20264 500 aaPredicted RBP6.44□□□□□ -1.38
PTPN4-209ENST00000469511 USP5P45974 858 aa6.44□□□□□ -1.38
PTPN4-209ENST00000469511 KCNH2Q12809 1159 aa6.44□□□□□ -1.38
PTPN4-209ENST00000469511 SLFNL1Q499Z3 407 aa6.44□□□□□ -1.38
PTPN4-209ENST00000469511 PSRC1Q6PGN9 363 aaPredicted RBP6.44□□□□□ -1.38
PTPN4-209ENST00000469511 CXCL17Q6UXB2 119 aa6.44□□□□□ -1.38
PTPN4-209ENST00000469511 TMCO2Q7Z6W1 182 aaPredicted RBP6.44□□□□□ -1.38
PTPN4-209ENST00000469511 HOMEZQ8IX15 550 aa6.44□□□□□ -1.38
PTPN4-209ENST00000469511 ABRAQ8N0Z2 381 aa6.44□□□□□ -1.38
PTPN4-209ENST00000469511 NUP133Q8WUM0 1156 aa6.44□□□□□ -1.38
PTPN4-209ENST00000469511 GLMNQ92990 594 aa6.44□□□□□ -1.38
PTPN4-209ENST00000469511 SLC6A16Q9GZN6 736 aa6.44□□□□□ -1.38
PTPN4-209ENST00000469511 TRPV6Q9H1D0 765 aa6.44□□□□□ -1.38
PTPN4-209ENST00000469511 EHD4Q9H223 541 aa6.44□□□□□ -1.38
PTPN4-209ENST00000469511 CABP5Q9NP86 173 aa6.44□□□□□ -1.38
PTPN4-209ENST00000469511 TLR7Q9NYK1 1049 aaKnown RBP6.44□□□□□ -1.38
PTPN4-209ENST00000469511 ZHX1Q9UKY1 873 aaPredicted RBP6.44□□□□□ -1.38
PTPN4-209ENST00000469511 NOB1Q9ULX3 412 aaKnown RBP6.44□□□□□ -1.38
PTPN4-209ENST00000469511 ADAMTS5Q9UNA0 930 aa6.44□□□□□ -1.38
PTPN4-209ENST00000469511 ATG2AQ2TAZ0 1938 aa6.44□□□□□ -1.38
PTPN4-209ENST00000469511 ELP1O95163 1332 aa6.44□□□□□ -1.38
PTPN4-209ENST00000469511 SPTBN4Q9H254 2564 aa6.44□□□□□ -1.38
PTPN4-209ENST00000469511 ZDBF2Q9HCK1 2354 aa6.44□□□□□ -1.38
PTPN4-209ENST00000469511 TECTAO75443 2155 aa6.44□□□□□ -1.38
PTPN4-209ENST00000469511 ROBO3Q96MS0 1386 aa6.44□□□□□ -1.38
PTPN4-209ENST00000469511 MYH4Q9Y623 1939 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 CYP2D7A0A087X1C5 515 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 LCHNA4D1U4 455 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 ZBBXA8MT70 800 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 DUSP11O75319 330 aaKnown RBP6.43□□□□□ -1.38
PTPN4-209ENST00000469511 UQCRFS1P1P0C7P4 283 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 AKR1B1P15121 316 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 IL9P15248 144 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 CST5P28325 142 aaPredicted RBP6.43□□□□□ -1.38
PTPN4-209ENST00000469511 SOX11P35716 441 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 STAT3P40763 770 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 PSMC6P62333 389 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 TAP1Q03518 808 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 GRB10Q13322 594 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 AAK1Q2M2I8 961 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 CCDC144BQ3MJ40 725 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 GNASQ5JWF2 1037 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 TTC39AQ5SRH9 613 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 RIOX2Q8IUF8 465 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 SPNS2Q8IVW8 549 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 MAGEB6Q8N7X4 407 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 SLC43A3Q8NBI5 491 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 ARMC2Q8NEN0 867 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.43□□□□□ -1.38
PTPN4-209ENST00000469511 ARNTL2Q8WYA1 636 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 GPKOWQ92917 476 aaPredicted RBP eCLIP6.43□□□□□ -1.38
PTPN4-209ENST00000469511 RNF166Q96A37 237 aaPredicted RBP6.43□□□□□ -1.38
PTPN4-209ENST00000469511 AGBL1Q96MI9 1066 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 GLT1D1Q96MS3 346 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 UIMC1Q96RL1 719 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 NUP88Q99567 741 aaPredicted RBP6.43□□□□□ -1.38
PTPN4-209ENST00000469511 RIOK1Q9BRS2 568 aaKnown RBP6.43□□□□□ -1.38
PTPN4-209ENST00000469511 NOC4LQ9BVI4 516 aaKnown RBP6.43□□□□□ -1.38
PTPN4-209ENST00000469511 KATNBL1Q9H079 304 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 UPF3AQ9H1J1 476 aaKnown RBP6.43□□□□□ -1.38
PTPN4-209ENST00000469511 HIPK3Q9H422 1215 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 SLC5A4Q9NY91 659 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 NRBP1Q9UHY1 535 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 ZNF214Q9UL59 606 aaPredicted RBP6.43□□□□□ -1.38
PTPN4-209ENST00000469511 FAM184BQ9ULE4 1060 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 DIS3Q9Y2L1 958 aaKnown RBP6.43□□□□□ -1.38
PTPN4-209ENST00000469511 PCDHA11Q9Y5I1 949 aa6.43□□□□□ -1.38
PTPN4-209ENST00000469511 SIP14410 1827 aa6.42□□□□□ -1.38
PTPN4-209ENST00000469511 DNAJC25-GNG10A0A024R161 153 aa6.42□□□□□ -1.38
PTPN4-209ENST00000469511 A0A0U1RQG5 324 aaPredicted RBP6.42□□□□□ -1.38
PTPN4-209ENST00000469511 PRR33A8MZF0 331 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms