RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 RRP12Q5JTH9 1297 aaKnown RBP14.45□□□□□ -0.1
COL5A1-207ENST00000469093 AKNAD1Q5T1N1 836 aa14.45□□□□□ -0.1
COL5A1-207ENST00000469093 SYDE2Q5VT97 1194 aa14.45□□□□□ -0.1
COL5A1-207ENST00000469093 CLEC4DQ8WXI8 215 aa14.45□□□□□ -0.1
COL5A1-207ENST00000469093 PPM1EQ8WY54 764 aa14.45□□□□□ -0.1
COL5A1-207ENST00000469093 FAM227BQ96M60 508 aa14.45□□□□□ -0.1
COL5A1-207ENST00000469093 GPCPD1Q9NPB8 672 aa14.45□□□□□ -0.1
COL5A1-207ENST00000469093 TOMM22Q9NS69 142 aa14.45□□□□□ -0.1
COL5A1-207ENST00000469093 ADD3Q9UEY8 706 aaKnown RBP14.45□□□□□ -0.1
COL5A1-207ENST00000469093 YBX2Q9Y2T7 364 aaKnown RBP14.45□□□□□ -0.1
COL5A1-207ENST00000469093 LOC102724159A0A0B4J2E5 919 aa14.44□□□□□ -0.1
COL5A1-207ENST00000469093 RBM47A0AV96 593 aaKnown RBP14.44□□□□□ -0.1
COL5A1-207ENST00000469093 PDE1AP54750 535 aa14.44□□□□□ -0.1
COL5A1-207ENST00000469093 PWP2Q15269 919 aaKnown RBP14.44□□□□□ -0.1
COL5A1-207ENST00000469093 MCMDC2Q4G0Z9 681 aa14.44□□□□□ -0.1
COL5A1-207ENST00000469093 RPUSD2Q8IZ73 545 aaKnown RBP14.44□□□□□ -0.1
COL5A1-207ENST00000469093 ALDH8A1Q9H2A2 487 aaPredicted RBP14.44□□□□□ -0.1
COL5A1-207ENST00000469093 MTIF3Q9H2K0 278 aaKnown RBP14.44□□□□□ -0.1
COL5A1-207ENST00000469093 NKX2-4Q9H2Z4 354 aa14.44□□□□□ -0.1
COL5A1-207ENST00000469093 SLC28A3Q9HAS3 691 aa14.44□□□□□ -0.1
COL5A1-207ENST00000469093 TRMT13Q9NUP7 481 aaKnown RBP14.44□□□□□ -0.1
COL5A1-207ENST00000469093 ZBTB47Q9UFB7 747 aaPredicted RBP14.44□□□□□ -0.1
COL5A1-207ENST00000469093 A0A0D9SFI3 127 aa14.43□□□□□ -0.1
COL5A1-207ENST00000469093 PTPDC1A2A3K4 754 aa14.43□□□□□ -0.1
COL5A1-207ENST00000469093 HSPD1P10809 573 aaKnown RBP14.43□□□□□ -0.1
COL5A1-207ENST00000469093 PDHBP11177 359 aa14.43□□□□□ -0.1
COL5A1-207ENST00000469093 PURAQ00577 322 aaKnown RBP14.43□□□□□ -0.1
COL5A1-207ENST00000469093 SCLYQ96I15 445 aa14.43□□□□□ -0.1
COL5A1-207ENST00000469093 TTC14Q96N46 770 aa14.43□□□□□ -0.1
COL5A1-207ENST00000469093 SLC4A7Q9Y6M7 1214 aa14.43□□□□□ -0.1
COL5A1-207ENST00000469093 SUPT20HL2P0C7V6 817 aa14.42□□□□□ -0.1
COL5A1-207ENST00000469093 CYP2C9P11712 490 aa14.42□□□□□ -0.1
COL5A1-207ENST00000469093 MYOGP15173 224 aa14.42□□□□□ -0.1
COL5A1-207ENST00000469093 IGFBP4P22692 258 aa14.42□□□□□ -0.1
COL5A1-207ENST00000469093 CALML3P27482 149 aa14.42□□□□□ -0.1
COL5A1-207ENST00000469093 RABGGTBP53611 331 aa14.42□□□□□ -0.1
COL5A1-207ENST00000469093 HAND2P61296 217 aa14.42□□□□□ -0.1
COL5A1-207ENST00000469093 CCDC85BQ15834 202 aaPredicted RBP14.42□□□□□ -0.1
COL5A1-207ENST00000469093 SLC30A10Q6XR72 485 aa14.42□□□□□ -0.1
COL5A1-207ENST00000469093 RNF207Q6ZRF8 634 aa14.42□□□□□ -0.1
COL5A1-207ENST00000469093 TICAM2Q86XR7 235 aa14.42□□□□□ -0.1
COL5A1-207ENST00000469093 ATXN2LQ8WWM7 1075 aaKnown RBP14.42□□□□□ -0.1
COL5A1-207ENST00000469093 POLR3EQ9NVU0 708 aa14.42□□□□□ -0.1
COL5A1-207ENST00000469093 PNMA2Q9UL42 364 aa14.42□□□□□ -0.1
COL5A1-207ENST00000469093 NCOR1O75376 2440 aa14.42□□□□□ -0.1
COL5A1-207ENST00000469093 MYL3P08590 195 aa14.41□□□□□ -0.1
COL5A1-207ENST00000469093 SNHG28P0DPA3 235 aa14.41□□□□□ -0.1
COL5A1-207ENST00000469093 CPT1AP50416 773 aa14.41□□□□□ -0.1
COL5A1-207ENST00000469093 RPS6P62753 249 aaKnown RBP14.41□□□□□ -0.1
COL5A1-207ENST00000469093 ZNF543Q08ER8 600 aa14.41□□□□□ -0.1
COL5A1-207ENST00000469093 ZNF589Q86UQ0 364 aaPredicted RBP14.41□□□□□ -0.1
COL5A1-207ENST00000469093 ASB2Q96Q27 587 aa14.41□□□□□ -0.1
COL5A1-207ENST00000469093 MTG1Q9BT17 334 aaPredicted RBP14.41□□□□□ -0.1
COL5A1-207ENST00000469093 GPHNQ9NQX3 736 aaPredicted RBP14.41□□□□□ -0.1
COL5A1-207ENST00000469093 TNKSO95271 1327 aa14.41□□□□□ -0.1
COL5A1-207ENST00000469093 TNFRSF10AO00220 468 aa14.4□□□□□ -0.1
COL5A1-207ENST00000469093 EDNRBP24530 442 aa14.4□□□□□ -0.1
COL5A1-207ENST00000469093 PDE4DQ08499 809 aa14.4□□□□□ -0.1
COL5A1-207ENST00000469093 NMIQ13287 307 aaPredicted RBP14.4□□□□□ -0.1
COL5A1-207ENST00000469093 HDAC1Q13547 482 aaPredicted RBP14.4□□□□□ -0.1
COL5A1-207ENST00000469093 TTLL4Q14679 1199 aa14.4□□□□□ -0.1
COL5A1-207ENST00000469093 NBPF20Q3BBV1 942 aa14.4□□□□□ -0.1
COL5A1-207ENST00000469093 MFSD6Q6ZSS7 791 aa14.4□□□□□ -0.1
COL5A1-207ENST00000469093 OR6J1Q8NGC5 347 aa14.4□□□□□ -0.1
COL5A1-207ENST00000469093 CRBNQ96SW2 442 aa14.4□□□□□ -0.1
COL5A1-207ENST00000469093 PCDHA11Q9Y5I1 949 aa14.4□□□□□ -0.1
COL5A1-207ENST00000469093 WDR19Q8NEZ3 1342 aa14.4□□□□□ -0.1
COL5A1-207ENST00000469093 LCTP09848 1927 aa14.39□□□□□ -0.11
COL5A1-207ENST00000469093 A6NJR5 290 aa14.39□□□□□ -0.11
COL5A1-207ENST00000469093 NKRFO15226 690 aaKnown RBP eCLIP14.39□□□□□ -0.11
COL5A1-207ENST00000469093 PFKMP08237 780 aa14.39□□□□□ -0.11
COL5A1-207ENST00000469093 PCP11498 1178 aaKnown RBP14.39□□□□□ -0.11
COL5A1-207ENST00000469093 ATP2A2P16615 1042 aaKnown RBP14.39□□□□□ -0.11
COL5A1-207ENST00000469093 RRP1P56182 461 aaKnown RBP14.39□□□□□ -0.11
COL5A1-207ENST00000469093 DEFB128Q7Z7B8 93 aa14.39□□□□□ -0.11
COL5A1-207ENST00000469093 DNERQ8NFT8 737 aa14.39□□□□□ -0.11
COL5A1-207ENST00000469093 SCFD2Q8WU76 684 aa14.39□□□□□ -0.11
COL5A1-207ENST00000469093 PPP1R13LQ8WUF5 828 aa14.39□□□□□ -0.11
COL5A1-207ENST00000469093 COPS5Q92905 334 aa14.39□□□□□ -0.11
COL5A1-207ENST00000469093 THEGQ9P2T0 379 aa14.39□□□□□ -0.11
COL5A1-207ENST00000469093 ZMYM6O95789 1325 aa14.39□□□□□ -0.11
COL5A1-207ENST00000469093 CHD9Q3L8U1 2897 aa14.38□□□□□ -0.11
COL5A1-207ENST00000469093 SPTBN5Q9NRC6 3674 aaKnown RBP14.38□□□□□ -0.11
COL5A1-207ENST00000469093 ZBBXA8MT70 800 aa14.38□□□□□ -0.11
COL5A1-207ENST00000469093 KPNA6O60684 536 aa14.38□□□□□ -0.11
COL5A1-207ENST00000469093 GOLGA8HP0CJ92 632 aa14.38□□□□□ -0.11
COL5A1-207ENST00000469093 TXNP10599 105 aaKnown RBP14.38□□□□□ -0.11
COL5A1-207ENST00000469093 MRPS5P82675 430 aaKnown RBP14.38□□□□□ -0.11
COL5A1-207ENST00000469093 PPP2R5BQ15173 497 aa14.38□□□□□ -0.11
COL5A1-207ENST00000469093 BRDTQ58F21 947 aaPredicted RBP14.38□□□□□ -0.11
COL5A1-207ENST00000469093 FAM47CQ5HY64 1035 aa14.38□□□□□ -0.11
COL5A1-207ENST00000469093 PPP2R2DQ66LE6 453 aa14.38□□□□□ -0.11
COL5A1-207ENST00000469093 NFRKBQ6P4R8 1299 aa14.38□□□□□ -0.11
COL5A1-207ENST00000469093 DGKHQ86XP1 1220 aa14.38□□□□□ -0.11
COL5A1-207ENST00000469093 TBC1D10CQ8IV04 446 aa14.38□□□□□ -0.11
COL5A1-207ENST00000469093 RGS22Q8NE09 1264 aa14.38□□□□□ -0.11
COL5A1-207ENST00000469093 TBC1D5Q92609 795 aa14.38□□□□□ -0.11
COL5A1-207ENST00000469093 MPHOSPH6Q99547 160 aaKnown RBP14.38□□□□□ -0.11
COL5A1-207ENST00000469093 ZKSCAN3Q9BRR0 538 aa14.38□□□□□ -0.11
COL5A1-207ENST00000469093 UBA5Q9GZZ9 404 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms