RNA–Protein interactions for RNA: ENST00000468822.5

SRRM1-207, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 768 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-207ENST00000468822 MORC4Q8TE76 937 aa18.35■□□□□ 0.53
SRRM1-207ENST00000468822 CERS4Q9HA82 394 aa18.35■□□□□ 0.53
SRRM1-207ENST00000468822 SCN5AQ14524 2016 aa18.34■□□□□ 0.53
SRRM1-207ENST00000468822 RBAK-RBAKDNI3L0D1 243 aa18.34■□□□□ 0.53
SRRM1-207ENST00000468822 PLA2G6O60733 806 aa18.34■□□□□ 0.53
SRRM1-207ENST00000468822 ZFYP08048 801 aaPredicted RBP18.34■□□□□ 0.53
SRRM1-207ENST00000468822 PPARAQ07869 468 aa18.34■□□□□ 0.53
SRRM1-207ENST00000468822 NSMFQ6X4W1 530 aa18.34■□□□□ 0.53
SRRM1-207ENST00000468822 KIAA1211Q6ZU35 1233 aa18.34■□□□□ 0.53
SRRM1-207ENST00000468822 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.34■□□□□ 0.53
SRRM1-207ENST00000468822 Q9Y3F1 56 aa18.34■□□□□ 0.53
SRRM1-207ENST00000468822 TNKSO95271 1327 aa18.33■□□□□ 0.53
SRRM1-207ENST00000468822 ZEB2O60315 1214 aa18.33■□□□□ 0.52
SRRM1-207ENST00000468822 CA3P07451 260 aa18.33■□□□□ 0.52
SRRM1-207ENST00000468822 PDE4BQ07343 736 aa18.33■□□□□ 0.52
SRRM1-207ENST00000468822 DUSP28Q4G0W2 176 aa18.33■□□□□ 0.52
SRRM1-207ENST00000468822 RCSD1Q6JBY9 416 aa18.33■□□□□ 0.52
SRRM1-207ENST00000468822 DEFB128Q7Z7B8 93 aa18.33■□□□□ 0.52
SRRM1-207ENST00000468822 RPUSD2Q8IZ73 545 aaKnown RBP18.33■□□□□ 0.52
SRRM1-207ENST00000468822 SEZ6LQ9BYH1 1024 aa18.33■□□□□ 0.52
SRRM1-207ENST00000468822 VTA1Q9NP79 307 aa18.33■□□□□ 0.52
SRRM1-207ENST00000468822 CCPG1Q9ULG6 757 aa18.33■□□□□ 0.52
SRRM1-207ENST00000468822 STX8Q9UNK0 236 aa18.33■□□□□ 0.52
SRRM1-207ENST00000468822 MTCH2Q9Y6C9 303 aa18.33■□□□□ 0.52
SRRM1-207ENST00000468822 PLA2G5P39877 138 aa18.32■□□□□ 0.52
SRRM1-207ENST00000468822 PURAQ00577 322 aaKnown RBP18.32■□□□□ 0.52
SRRM1-207ENST00000468822 CTDSPL2Q05D32 466 aa18.32■□□□□ 0.52
SRRM1-207ENST00000468822 BAATQ14032 418 aaPredicted RBP18.32■□□□□ 0.52
SRRM1-207ENST00000468822 TTBK2Q6IQ55 1244 aa18.32■□□□□ 0.52
SRRM1-207ENST00000468822 SPRED2Q7Z698 418 aa18.32■□□□□ 0.52
SRRM1-207ENST00000468822 IL27Q8NEV9 243 aa18.32■□□□□ 0.52
SRRM1-207ENST00000468822 OTUD7AQ8TE49 926 aaPredicted RBP18.32■□□□□ 0.52
SRRM1-207ENST00000468822 DCTPP1Q9H773 170 aa18.32■□□□□ 0.52
SRRM1-207ENST00000468822 MTMR7Q9Y216 660 aa18.32■□□□□ 0.52
SRRM1-207ENST00000468822 NFIBO00712 420 aa18.31■□□□□ 0.52
SRRM1-207ENST00000468822 ICAM1P05362 532 aa18.31■□□□□ 0.52
SRRM1-207ENST00000468822 SLC16A2P36021 539 aa18.31■□□□□ 0.52
SRRM1-207ENST00000468822 ZMYM1Q5SVZ6 1142 aa18.31■□□□□ 0.52
SRRM1-207ENST00000468822 PI4K2BQ8TCG2 481 aa18.31■□□□□ 0.52
SRRM1-207ENST00000468822 WDR11Q9BZH6 1224 aa18.31■□□□□ 0.52
SRRM1-207ENST00000468822 NACAP1Q9BZK3 213 aa18.31■□□□□ 0.52
SRRM1-207ENST00000468822 NAPBQ9H115 298 aa18.31■□□□□ 0.52
SRRM1-207ENST00000468822 ERC2O15083 957 aa18.3■□□□□ 0.52
SRRM1-207ENST00000468822 MYL3P08590 195 aa18.3■□□□□ 0.52
SRRM1-207ENST00000468822 POU3F3P20264 500 aaPredicted RBP18.3■□□□□ 0.52
SRRM1-207ENST00000468822 NOVP48745 357 aa18.3■□□□□ 0.52
SRRM1-207ENST00000468822 ALDH5A1P51649 535 aaPredicted RBP18.3■□□□□ 0.52
SRRM1-207ENST00000468822 TMEM67Q5HYA8 995 aa18.3■□□□□ 0.52
SRRM1-207ENST00000468822 GPATCH3Q96I76 525 aa18.3■□□□□ 0.52
SRRM1-207ENST00000468822 TSPYL2Q9H2G4 693 aaPredicted RBP18.3■□□□□ 0.52
SRRM1-207ENST00000468822 RANBP17Q9H2T7 1088 aaKnown RBP18.3■□□□□ 0.52
SRRM1-207ENST00000468822 TET1Q8NFU7 2136 aa18.29■□□□□ 0.52
SRRM1-207ENST00000468822 RBM47A0AV96 593 aaKnown RBP18.29■□□□□ 0.52
SRRM1-207ENST00000468822 TAP1Q03518 808 aa18.29■□□□□ 0.52
SRRM1-207ENST00000468822 SKIV2LQ15477 1246 aaKnown RBP18.29■□□□□ 0.52
SRRM1-207ENST00000468822 NBPF20Q3BBV1 942 aa18.29■□□□□ 0.52
SRRM1-207ENST00000468822 SLC30A10Q6XR72 485 aa18.29■□□□□ 0.52
SRRM1-207ENST00000468822 CHMP4BQ9H444 224 aaKnown RBP18.29■□□□□ 0.52
SRRM1-207ENST00000468822 SCN10AQ9Y5Y9 1956 aa18.29■□□□□ 0.52
SRRM1-207ENST00000468822 BRWD1Q9NSI6 2320 aa18.28■□□□□ 0.52
SRRM1-207ENST00000468822 TSPY2A6NKD2 308 aa18.28■□□□□ 0.52
SRRM1-207ENST00000468822 SLC3A2P08195 630 aaKnown RBP18.28■□□□□ 0.52
SRRM1-207ENST00000468822 PFKMP08237 780 aa18.28■□□□□ 0.52
SRRM1-207ENST00000468822 SUPT20HL2P0C7V6 817 aa18.28■□□□□ 0.52
SRRM1-207ENST00000468822 VPS53Q5VIR6 699 aa18.28■□□□□ 0.52
SRRM1-207ENST00000468822 CLEC4DQ8WXI8 215 aa18.28■□□□□ 0.52
SRRM1-207ENST00000468822 COPS5Q92905 334 aa18.28■□□□□ 0.52
SRRM1-207ENST00000468822 MTG1Q9BT17 334 aaPredicted RBP18.28■□□□□ 0.52
SRRM1-207ENST00000468822 EPHX3Q9H6B9 360 aa18.28■□□□□ 0.52
SRRM1-207ENST00000468822 POLR3EQ9NVU0 708 aa18.28■□□□□ 0.52
SRRM1-207ENST00000468822 RCAN3Q9UKA8 241 aa18.28■□□□□ 0.52
SRRM1-207ENST00000468822 IQCF3P0C7M6 154 aa18.27■□□□□ 0.52
SRRM1-207ENST00000468822 CCDC96Q2M329 555 aa18.27■□□□□ 0.52
SRRM1-207ENST00000468822 FAM47CQ5HY64 1035 aa18.27■□□□□ 0.52
SRRM1-207ENST00000468822 BTNL9Q6UXG8 535 aa18.27■□□□□ 0.52
SRRM1-207ENST00000468822 OR6J1Q8NGC5 347 aa18.27■□□□□ 0.52
SRRM1-207ENST00000468822 ARNTL2Q8WYA1 636 aa18.27■□□□□ 0.52
SRRM1-207ENST00000468822 FAM122AQ96E09 287 aa18.27■□□□□ 0.52
SRRM1-207ENST00000468822 FRMPD2Q68DX3 1309 aaPredicted RBP18.26■□□□□ 0.51
SRRM1-207ENST00000468822 TLL1O43897 1013 aa18.26■□□□□ 0.51
SRRM1-207ENST00000468822 RANBP6O60518 1105 aaKnown RBP18.26■□□□□ 0.51
SRRM1-207ENST00000468822 LPXNO60711 386 aa18.26■□□□□ 0.51
SRRM1-207ENST00000468822 CPT1AP50416 773 aa18.26■□□□□ 0.51
SRRM1-207ENST00000468822 GPNMBQ14956 572 aa18.26■□□□□ 0.51
SRRM1-207ENST00000468822 SYDE2Q5VT97 1194 aa18.26■□□□□ 0.51
SRRM1-207ENST00000468822 TMCO2Q7Z6W1 182 aaPredicted RBP18.26■□□□□ 0.51
SRRM1-207ENST00000468822 HERC6Q8IVU3 1022 aa18.26■□□□□ 0.51
SRRM1-207ENST00000468822 DCAF4Q8WV16 495 aa18.26■□□□□ 0.51
SRRM1-207ENST00000468822 KHSRPQ92945 711 aaKnown RBP eCLIP18.26■□□□□ 0.512e-12■■□□□ 13.6
SRRM1-207ENST00000468822 CTAGE1Q96RT6 745 aa18.26■□□□□ 0.51
SRRM1-207ENST00000468822 FSD1Q9BTV5 496 aa18.26■□□□□ 0.51
SRRM1-207ENST00000468822 ADD3Q9UEY8 706 aaKnown RBP18.26■□□□□ 0.51
SRRM1-207ENST00000468822 TANC1Q9C0D5 1861 aa18.25■□□□□ 0.51
SRRM1-207ENST00000468822 PTPDC1A2A3K4 754 aa18.25■□□□□ 0.51
SRRM1-207ENST00000468822 EDNRBP24530 442 aa18.25■□□□□ 0.51
SRRM1-207ENST00000468822 CALML3P27482 149 aa18.25■□□□□ 0.51
SRRM1-207ENST00000468822 GRB10Q13322 594 aa18.25■□□□□ 0.51
SRRM1-207ENST00000468822 AAK1Q2M2I8 961 aa18.25■□□□□ 0.51
SRRM1-207ENST00000468822 SLC9A7Q96T83 725 aa18.25■□□□□ 0.51
SRRM1-207ENST00000468822 C1QTNF1Q9BXJ1 281 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms