RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 SLC44A5Q8NCS7 719 aa17.65■□□□□ 0.42
TSPAN4-211ENST00000468468 CD209Q9NNX6 404 aa17.65■□□□□ 0.42
TSPAN4-211ENST00000468468 TCP11L1Q9NUJ3 509 aa17.65■□□□□ 0.42
TSPAN4-211ENST00000468468 AGPAT5Q9NUQ2 364 aa17.65■□□□□ 0.42
TSPAN4-211ENST00000468468 ATP1A1P05023 1023 aaKnown RBP17.65■□□□□ 0.42
TSPAN4-211ENST00000468468 TRIM21P19474 475 aaKnown RBP17.65■□□□□ 0.42
TSPAN4-211ENST00000468468 PDE4DQ08499 809 aa17.65■□□□□ 0.42
TSPAN4-211ENST00000468468 TBC1D8BQ0IIM8 1120 aa17.65■□□□□ 0.42
TSPAN4-211ENST00000468468 MSL3Q8N5Y2 521 aaKnown RBP17.65■□□□□ 0.42
TSPAN4-211ENST00000468468 P2RX5Q93086 422 aa17.65■□□□□ 0.42
TSPAN4-211ENST00000468468 CCDC47Q96A33 483 aaKnown RBP17.65■□□□□ 0.42
TSPAN4-211ENST00000468468 TMEM47Q9BQJ4 181 aa17.65■□□□□ 0.42
TSPAN4-211ENST00000468468 CUEDC2Q9H467 287 aa17.65■□□□□ 0.42
TSPAN4-211ENST00000468468 GGA1Q9UJY5 639 aa17.65■□□□□ 0.42
TSPAN4-211ENST00000468468 MAST2Q6P0Q8 1798 aa17.65■□□□□ 0.42
TSPAN4-211ENST00000468468 PALM3A6NDB9 673 aaPredicted RBP17.64■□□□□ 0.41
TSPAN4-211ENST00000468468 N4BP1O75113 896 aaKnown RBP17.64■□□□□ 0.41
TSPAN4-211ENST00000468468 CCNE1P24864 410 aa17.64■□□□□ 0.41
TSPAN4-211ENST00000468468 KLK7P49862 253 aa17.64■□□□□ 0.41
TSPAN4-211ENST00000468468 ZNHIT6Q9NWK9 470 aaKnown RBP17.64■□□□□ 0.41
TSPAN4-211ENST00000468468 PSD3Q9NYI0 1048 aa17.64■□□□□ 0.41
TSPAN4-211ENST00000468468 SAR1BQ9Y6B6 198 aa17.64■□□□□ 0.41
TSPAN4-211ENST00000468468 CYLC1P35663 651 aaPredicted RBP17.64■□□□□ 0.41
TSPAN4-211ENST00000468468 NT5C2P49902 561 aa17.64■□□□□ 0.41
TSPAN4-211ENST00000468468 RAD51AP2Q09MP3 1159 aa17.64■□□□□ 0.41
TSPAN4-211ENST00000468468 MEA1Q16626 185 aa17.64■□□□□ 0.41
TSPAN4-211ENST00000468468 LETM2Q2VYF4 491 aa17.64■□□□□ 0.41
TSPAN4-211ENST00000468468 ANKRD40Q6AI12 368 aa17.64■□□□□ 0.41
TSPAN4-211ENST00000468468 TGFBRAP1Q8WUH2 860 aa17.64■□□□□ 0.41
TSPAN4-211ENST00000468468 JAKMIP2Q96AA8 810 aa17.64■□□□□ 0.41
TSPAN4-211ENST00000468468 PCMTD1Q96MG8 357 aaPredicted RBP17.64■□□□□ 0.41
TSPAN4-211ENST00000468468 NUP58Q9BVL2 599 aa17.64■□□□□ 0.41
TSPAN4-211ENST00000468468 CPVLQ9H3G5 476 aa17.64■□□□□ 0.41
TSPAN4-211ENST00000468468 POLLQ9UGP5 575 aa17.64■□□□□ 0.41
TSPAN4-211ENST00000468468 FLT1P17948 1338 aa17.64■□□□□ 0.41
TSPAN4-211ENST00000468468 KRT86O43790 486 aa17.63■□□□□ 0.41
TSPAN4-211ENST00000468468 CCNT1O60563 726 aaKnown RBP17.63■□□□□ 0.41
TSPAN4-211ENST00000468468 SRGAP2O75044 1071 aa17.63■□□□□ 0.41
TSPAN4-211ENST00000468468 OR52Z1P0C646 297 aa17.63■□□□□ 0.41
TSPAN4-211ENST00000468468 NAPAP54920 295 aa17.63■□□□□ 0.41
TSPAN4-211ENST00000468468 ASIC1P78348 528 aa17.63■□□□□ 0.41
TSPAN4-211ENST00000468468 WDR93Q6P2C0 686 aa17.63■□□□□ 0.41
TSPAN4-211ENST00000468468 TRIM9Q9C026 710 aa17.63■□□□□ 0.41
TSPAN4-211ENST00000468468 TTYH3Q9C0H2 523 aa17.63■□□□□ 0.41
TSPAN4-211ENST00000468468 MAGEF1Q9HAY2 307 aa17.63■□□□□ 0.41
TSPAN4-211ENST00000468468 BICDL2A1A5D9 508 aa17.63■□□□□ 0.41
TSPAN4-211ENST00000468468 RASSF10A6NK89 507 aa17.63■□□□□ 0.41
TSPAN4-211ENST00000468468 KLRF2D3W0D1 207 aa17.63■□□□□ 0.41
TSPAN4-211ENST00000468468 ATP2B4P23634 1241 aa17.63■□□□□ 0.41
TSPAN4-211ENST00000468468 MTIF2P46199 727 aaKnown RBP17.63■□□□□ 0.41
TSPAN4-211ENST00000468468 STK4Q13043 487 aa17.63■□□□□ 0.41
TSPAN4-211ENST00000468468 C15orf52Q6ZUT6 534 aaKnown RBP17.63■□□□□ 0.41
TSPAN4-211ENST00000468468 CNOT6LQ96LI5 555 aaKnown RBP17.63■□□□□ 0.41
TSPAN4-211ENST00000468468 AK8Q96MA6 479 aa17.63■□□□□ 0.41
TSPAN4-211ENST00000468468 MMS19Q96T76 1030 aa17.63■□□□□ 0.41
TSPAN4-211ENST00000468468 RNF216Q9NWF9 866 aaPredicted RBP17.63■□□□□ 0.41
TSPAN4-211ENST00000468468 ROBO3Q96MS0 1386 aa17.63■□□□□ 0.41
TSPAN4-211ENST00000468468 TEX2Q8IWB9 1127 aa17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 LZTS2Q9BRK4 669 aa17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 NHEJ1Q9H9Q4 299 aaPredicted RBP17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 SAP30BPQ9UHR5 308 aaKnown RBP17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 BAG3O95817 575 aa17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 FCER1AP12319 257 aa17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 USP14P54578 494 aa17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 ZBED6P86452 979 aa17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 NONOQ15233 471 aaKnown RBP eCLIP17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 ZSCAN26Q16670 478 aa17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 PAPD7Q5XG87 772 aaKnown RBP17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 KRT25Q7Z3Z0 450 aa17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 FAM114A1Q8IWE2 563 aa17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 RETREG2Q8NC44 543 aa17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 TBC1D16Q8TBP0 767 aa17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 CCDC102AQ96A19 550 aa17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 CAPZA3Q96KX2 299 aa17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 ZMYND12Q9H0C1 365 aa17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 C6orf229H3BNL8 230 aa17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 BBOX1O75936 387 aa17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 IPO7O95373 1038 aaKnown RBP17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 RASA1P20936 1047 aa17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 MUM1L1Q5H9M0 696 aa17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 ZNF662Q6ZS27 426 aa17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 MAPKAPK5Q8IW41 473 aa17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 EHBP1Q8NDI1 1231 aa17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 C7orf25Q9BPX7 421 aa17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 NOC4LQ9BVI4 516 aaKnown RBP17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 LACRTQ9GZZ8 138 aa17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 FAN1Q9Y2M0 1017 aa17.62■□□□□ 0.41
TSPAN4-211ENST00000468468 RCCD1A6NED2 376 aa17.61■□□□□ 0.41
TSPAN4-211ENST00000468468 SMCO2A6NFE2 343 aa17.61■□□□□ 0.41
TSPAN4-211ENST00000468468 LRRIQ3A6PVS8 624 aaPredicted RBP17.61■□□□□ 0.41
TSPAN4-211ENST00000468468 HOXA10P31260 410 aaPredicted RBP17.61■□□□□ 0.41
TSPAN4-211ENST00000468468 TECP42680 631 aa17.61■□□□□ 0.41
TSPAN4-211ENST00000468468 EIF3CLB5ME19 914 aaKnown RBP17.61■□□□□ 0.41
TSPAN4-211ENST00000468468 GSTO1P78417 241 aa17.61■□□□□ 0.41
TSPAN4-211ENST00000468468 HSP90B2PQ58FF3 399 aa17.61■□□□□ 0.41
TSPAN4-211ENST00000468468 CCDC170Q8IYT3 715 aa17.61■□□□□ 0.41
TSPAN4-211ENST00000468468 EIF3CQ99613 913 aaKnown RBP17.61■□□□□ 0.41
TSPAN4-211ENST00000468468 RTFDC1Q9BY42 306 aaPredicted RBP17.61■□□□□ 0.41
TSPAN4-211ENST00000468468 IL1R1P14778 569 aa17.6■□□□□ 0.41
TSPAN4-211ENST00000468468 SPZ1Q9BXG8 430 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms