RNA–Protein interactions for RNA: ENST00000468421.1

MSX1-202, Transcript of msh homeobox 1, humanhuman

TSL 3

Gene MSX1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-202ENST00000468421 TESPA1A2RU30 521 aaPredicted RBP12.27□□□□□ -0.45
MSX1-202ENST00000468421 FAM155AB1AL88 458 aaPredicted RBP12.27□□□□□ -0.45
MSX1-202ENST00000468421 PIK3CDO00329 1044 aa12.27□□□□□ -0.45
MSX1-202ENST00000468421 PDHXO00330 501 aa12.27□□□□□ -0.45
MSX1-202ENST00000468421 CYP2C8P10632 490 aa12.27□□□□□ -0.45
MSX1-202ENST00000468421 TRAPPC10P48553 1259 aa12.27□□□□□ -0.45
MSX1-202ENST00000468421 HSD17B4P51659 736 aa12.27□□□□□ -0.45
MSX1-202ENST00000468421 FSTL1Q12841 308 aa12.27□□□□□ -0.45
MSX1-202ENST00000468421 AP3B2Q13367 1082 aa12.27□□□□□ -0.45
MSX1-202ENST00000468421 STK38Q15208 465 aa12.27□□□□□ -0.45
MSX1-202ENST00000468421 ZNF174Q15697 407 aa12.27□□□□□ -0.45
MSX1-202ENST00000468421 FAM43AQ8N2R8 423 aa12.27□□□□□ -0.45
MSX1-202ENST00000468421 TRERF1Q96PN7 1200 aa12.27□□□□□ -0.45
MSX1-202ENST00000468421 PTPN18Q99952 460 aa12.27□□□□□ -0.45
MSX1-202ENST00000468421 PAGR1Q9BTK6 254 aa12.27□□□□□ -0.45
MSX1-202ENST00000468421 TEX13BQ9BXU2 312 aa12.27□□□□□ -0.45
MSX1-202ENST00000468421 TXNRD2Q9NNW7 524 aa12.27□□□□□ -0.45
MSX1-202ENST00000468421 RNF146Q9NTX7 359 aa12.27□□□□□ -0.45
MSX1-202ENST00000468421 COL20A1Q9P218 1284 aa12.27□□□□□ -0.45
MSX1-202ENST00000468421 PNMA2Q9UL42 364 aa12.27□□□□□ -0.45
MSX1-202ENST00000468421 ABT1Q9ULW3 272 aaKnown RBP12.27□□□□□ -0.45
MSX1-202ENST00000468421 MRVI1Q9Y6F6 885 aa12.27□□□□□ -0.45
MSX1-202ENST00000468421 LRRC37A2A6NM11 1700 aa12.26□□□□□ -0.45
MSX1-202ENST00000468421 GCOM1H8Y6P7 765 aaPredicted RBP12.26□□□□□ -0.45
MSX1-202ENST00000468421 SPTLC2O15270 562 aa12.26□□□□□ -0.45
MSX1-202ENST00000468421 POLR2MP0CAP2 368 aa12.26□□□□□ -0.45
MSX1-202ENST00000468421 MARCKSP29966 332 aaPredicted RBP12.26□□□□□ -0.45
MSX1-202ENST00000468421 STAT3P40763 770 aa12.26□□□□□ -0.45
MSX1-202ENST00000468421 GHRHRQ02643 423 aa12.26□□□□□ -0.45
MSX1-202ENST00000468421 PLS1Q14651 629 aa12.26□□□□□ -0.45
MSX1-202ENST00000468421 SLC39A14Q15043 492 aa12.26□□□□□ -0.45
MSX1-202ENST00000468421 TPRNQ4KMQ1 711 aa12.26□□□□□ -0.45
MSX1-202ENST00000468421 NEK8Q86SG6 692 aa12.26□□□□□ -0.45
MSX1-202ENST00000468421 FCHSD1Q86WN1 690 aa12.26□□□□□ -0.45
MSX1-202ENST00000468421 MB21D1Q8N884 522 aa12.26□□□□□ -0.45
MSX1-202ENST00000468421 R3HDMLQ9H3Y0 253 aa12.26□□□□□ -0.45
MSX1-202ENST00000468421 RBPJLQ9UBG7 517 aa12.26□□□□□ -0.45
MSX1-202ENST00000468421 SLC45A1Q9Y2W3 748 aa12.26□□□□□ -0.45
MSX1-202ENST00000468421 IGF2BP3O00425 579 aaKnown RBP eCLIP12.25□□□□□ -0.45
MSX1-202ENST00000468421 MCM7P33993 719 aa12.25□□□□□ -0.45
MSX1-202ENST00000468421 CSPP1Q1MSJ5 1256 aa12.25□□□□□ -0.45
MSX1-202ENST00000468421 LETM2Q2VYF4 491 aa12.25□□□□□ -0.45
MSX1-202ENST00000468421 TKFCQ3LXA3 575 aa12.25□□□□□ -0.45
MSX1-202ENST00000468421 SLC30A10Q6XR72 485 aa12.25□□□□□ -0.45
MSX1-202ENST00000468421 RIOX2Q8IUF8 465 aa12.25□□□□□ -0.45
MSX1-202ENST00000468421 GPT2Q8TD30 523 aa12.25□□□□□ -0.45
MSX1-202ENST00000468421 CRYGNQ8WXF5 182 aa12.25□□□□□ -0.45
MSX1-202ENST00000468421 HHIPL1Q96JK4 782 aa12.25□□□□□ -0.45
MSX1-202ENST00000468421 MOV10L1Q9BXT6 1211 aaKnown RBP12.25□□□□□ -0.45
MSX1-202ENST00000468421 SPATC1LQ9H0A9 340 aa12.25□□□□□ -0.45
MSX1-202ENST00000468421 PNMA3Q9UL41 463 aa12.25□□□□□ -0.45
MSX1-202ENST00000468421 PCDHA7Q9UN72 937 aa12.25□□□□□ -0.45
MSX1-202ENST00000468421 RABGAP1Q9Y3P9 1069 aa12.25□□□□□ -0.45
MSX1-202ENST00000468421 MANSC4A6NHS7 340 aaPredicted RBP12.24□□□□□ -0.45
MSX1-202ENST00000468421 SPDYE3A6NKU9 549 aa12.24□□□□□ -0.45
MSX1-202ENST00000468421 PPP6R2O75170 966 aa12.24□□□□□ -0.45
MSX1-202ENST00000468421 TDP2O95551 362 aa12.24□□□□□ -0.45
MSX1-202ENST00000468421 FOSP01100 380 aaPredicted RBP12.24□□□□□ -0.45
MSX1-202ENST00000468421 SREBF1P36956 1147 aa12.24□□□□□ -0.45
MSX1-202ENST00000468421 RPS6P62753 249 aaKnown RBP12.24□□□□□ -0.45
MSX1-202ENST00000468421 ATP2C1P98194 919 aaPredicted RBP12.24□□□□□ -0.45
MSX1-202ENST00000468421 Q3C1V9 767 aa12.24□□□□□ -0.45
MSX1-202ENST00000468421 CYP4F22Q6NT55 531 aa12.24□□□□□ -0.45
MSX1-202ENST00000468421 NSMFQ6X4W1 530 aa12.24□□□□□ -0.45
MSX1-202ENST00000468421 MCF2L2Q86YR7 1114 aa12.24□□□□□ -0.45
MSX1-202ENST00000468421 TEX2Q8IWB9 1127 aa12.24□□□□□ -0.45
MSX1-202ENST00000468421 RPTORQ8N122 1335 aa12.24□□□□□ -0.45
MSX1-202ENST00000468421 C4orf32Q8N8J7 132 aa12.24□□□□□ -0.45
MSX1-202ENST00000468421 KCNG4Q8TDN1 519 aa12.24□□□□□ -0.45
MSX1-202ENST00000468421 SYTL5Q8TDW5 730 aaPredicted RBP12.24□□□□□ -0.45
MSX1-202ENST00000468421 ZIC5Q96T25 663 aa12.24□□□□□ -0.45
MSX1-202ENST00000468421 TMEM60Q9H2L4 133 aa12.24□□□□□ -0.45
MSX1-202ENST00000468421 ACAD9Q9H845 621 aa12.24□□□□□ -0.45
MSX1-202ENST00000468421 PLXNA1Q9UIW2 1896 aa12.24□□□□□ -0.45
MSX1-202ENST00000468421 FBXO2Q9UK22 296 aaPredicted RBP12.24□□□□□ -0.45
MSX1-202ENST00000468421 ADGRA2Q96PE1 1338 aa12.23□□□□□ -0.45
MSX1-202ENST00000468421 SLC37A4O43826 429 aa12.23□□□□□ -0.45
MSX1-202ENST00000468421 CCNT1O60563 726 aaKnown RBP12.23□□□□□ -0.45
MSX1-202ENST00000468421 PTMSP20962 102 aa12.23□□□□□ -0.45
MSX1-202ENST00000468421 ME1P48163 572 aa12.23□□□□□ -0.45
MSX1-202ENST00000468421 UBE2HP62256 183 aa12.23□□□□□ -0.45
MSX1-202ENST00000468421 ERVK-9P63128 1117 aa12.23□□□□□ -0.45
MSX1-202ENST00000468421 ERVK-24P63145 666 aa12.23□□□□□ -0.45
MSX1-202ENST00000468421 UBXN2AP68543 259 aa12.23□□□□□ -0.45
MSX1-202ENST00000468421 ARHGAP4P98171 946 aa12.23□□□□□ -0.45
MSX1-202ENST00000468421 GRIN1Q05586 938 aa12.23□□□□□ -0.45
MSX1-202ENST00000468421 PTGDRQ13258 359 aa12.23□□□□□ -0.45
MSX1-202ENST00000468421 BAATQ14032 418 aaPredicted RBP12.23□□□□□ -0.45
MSX1-202ENST00000468421 AXDND1Q5T1B0 1012 aaPredicted RBP12.23□□□□□ -0.45
MSX1-202ENST00000468421 MCTP2Q6DN12 878 aa12.23□□□□□ -0.45
MSX1-202ENST00000468421 RNF207Q6ZRF8 634 aa12.23□□□□□ -0.45
MSX1-202ENST00000468421 CHST13Q8NET6 341 aa12.23□□□□□ -0.45
MSX1-202ENST00000468421 SMCR8Q8TEV9 937 aaPredicted RBP12.23□□□□□ -0.45
MSX1-202ENST00000468421 GTF3C2Q8WUA4 911 aaPredicted RBP12.23□□□□□ -0.45
MSX1-202ENST00000468421 CCDC102AQ96A19 550 aa12.23□□□□□ -0.45
MSX1-202ENST00000468421 CLIC6Q96NY7 704 aa12.23□□□□□ -0.45
MSX1-202ENST00000468421 PURBQ96QR8 312 aaKnown RBP12.23□□□□□ -0.45
MSX1-202ENST00000468421 TAAR1Q96RJ0 339 aa12.23□□□□□ -0.45
MSX1-202ENST00000468421 A1CFQ9NQ94 594 aaKnown RBP12.23□□□□□ -0.45
MSX1-202ENST00000468421 CEP131Q9UPN4 1083 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms