RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 ADD3Q9UEY8 706 aaKnown RBP28.74■■■□□ 2.19
PTCH1-210ENST00000468211 UNC80Q8N2C7 3258 aa28.74■■■□□ 2.19
PTCH1-210ENST00000468211 WDR19Q8NEZ3 1342 aa28.73■■■□□ 2.19
PTCH1-210ENST00000468211 EYSQ5T1H1 3165 aa28.73■■■□□ 2.19
PTCH1-210ENST00000468211 PDE4AP27815 886 aa28.73■■■□□ 2.19
PTCH1-210ENST00000468211 RNF207Q6ZRF8 634 aa28.73■■■□□ 2.19
PTCH1-210ENST00000468211 CDX2Q99626 313 aaPredicted RBP28.73■■■□□ 2.19
PTCH1-210ENST00000468211 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.73■■■□□ 2.19
PTCH1-210ENST00000468211 DSCC1Q9BVC3 393 aa28.73■■■□□ 2.19
PTCH1-210ENST00000468211 RPS6P62753 249 aaKnown RBP28.72■■■□□ 2.19
PTCH1-210ENST00000468211 PNMA1Q8ND90 353 aa28.72■■■□□ 2.19
PTCH1-210ENST00000468211 Q9Y3F1 56 aa28.72■■■□□ 2.19
PTCH1-210ENST00000468211 SUPT16HQ9Y5B9 1047 aaKnown RBP28.72■■■□□ 2.19
PTCH1-210ENST00000468211 HIP1O00291 1037 aa28.71■■■□□ 2.19
PTCH1-210ENST00000468211 CSF2RAP15509 400 aa28.71■■■□□ 2.19
PTCH1-210ENST00000468211 PSMC6P62333 389 aa28.71■■■□□ 2.19
PTCH1-210ENST00000468211 ITGA7Q13683 1181 aa28.71■■■□□ 2.19
PTCH1-210ENST00000468211 USH1GQ495M9 461 aa28.71■■■□□ 2.19
PTCH1-210ENST00000468211 DUSP28Q4G0W2 176 aa28.71■■■□□ 2.19
PTCH1-210ENST00000468211 GPATCH4Q5T3I0 446 aaKnown RBP28.71■■■□□ 2.19
PTCH1-210ENST00000468211 ANKS1AQ92625 1134 aa28.71■■■□□ 2.19
PTCH1-210ENST00000468211 ZSWIM5Q9P217 1185 aa28.71■■■□□ 2.19
PTCH1-210ENST00000468211 RBM47A0AV96 593 aaKnown RBP28.7■■■□□ 2.18
PTCH1-210ENST00000468211 DLL1O00548 723 aa28.7■■■□□ 2.18
PTCH1-210ENST00000468211 TLR3O15455 904 aaKnown RBP28.7■■■□□ 2.18
PTCH1-210ENST00000468211 CABYRO75952 493 aa28.7■■■□□ 2.18
PTCH1-210ENST00000468211 CYP2C18P33260 490 aa28.7■■■□□ 2.18
PTCH1-210ENST00000468211 IQCA1Q86XH1 822 aa28.7■■■□□ 2.18
PTCH1-210ENST00000468211 ENAHQ8N8S7 591 aaPredicted RBP28.7■■■□□ 2.18
PTCH1-210ENST00000468211 ZSCAN10Q96SZ4 725 aaPredicted RBP28.7■■■□□ 2.18
PTCH1-210ENST00000468211 WDR11Q9BZH6 1224 aa28.7■■■□□ 2.18
PTCH1-210ENST00000468211 GSPT1P15170 499 aaKnown RBP28.69■■■□□ 2.18
PTCH1-210ENST00000468211 TMEM240Q5SV17 173 aa28.69■■■□□ 2.18
PTCH1-210ENST00000468211 PNMA2Q9UL42 364 aa28.69■■■□□ 2.18
PTCH1-210ENST00000468211 UMODL1Q5DID0 1318 aa28.69■■■□□ 2.18
PTCH1-210ENST00000468211 LOC102724159A0A0B4J2E5 919 aa28.68■■■□□ 2.18
PTCH1-210ENST00000468211 ACRP10323 421 aa28.68■■■□□ 2.18
PTCH1-210ENST00000468211 PPIGQ13427 754 aaKnown RBP eCLIP28.68■■■□□ 2.18
PTCH1-210ENST00000468211 PWP2Q15269 919 aaKnown RBP28.68■■■□□ 2.18
PTCH1-210ENST00000468211 IMMTQ16891 758 aaKnown RBP28.68■■■□□ 2.18
PTCH1-210ENST00000468211 TBC1D5Q92609 795 aa28.68■■■□□ 2.18
PTCH1-210ENST00000468211 TRPV6Q9H1D0 765 aa28.68■■■□□ 2.18
PTCH1-210ENST00000468211 KAT14Q9H8E8 782 aa28.68■■■□□ 2.18
PTCH1-210ENST00000468211 ZEB2O60315 1214 aa28.67■■■□□ 2.18
PTCH1-210ENST00000468211 EDNRBP24530 442 aa28.67■■■□□ 2.18
PTCH1-210ENST00000468211 CDC37Q16543 378 aaPredicted RBP28.67■■■□□ 2.18
PTCH1-210ENST00000468211 ADGRF4Q8IZF3 695 aa28.67■■■□□ 2.18
PTCH1-210ENST00000468211 MYLIPQ8WY64 445 aa28.67■■■□□ 2.18
PTCH1-210ENST00000468211 TNKSO95271 1327 aa28.67■■■□□ 2.18
PTCH1-210ENST00000468211 NT5C2P49902 561 aa28.66■■■□□ 2.18
PTCH1-210ENST00000468211 CCDC178Q5BJE1 867 aa28.66■■■□□ 2.18
PTCH1-210ENST00000468211 TMEM199Q8N511 208 aa28.66■■■□□ 2.18
PTCH1-210ENST00000468211 SCN10AQ9Y5Y9 1956 aa28.65■■■□□ 2.18
PTCH1-210ENST00000468211 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.65■■■□□ 2.18
PTCH1-210ENST00000468211 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.65■■■□□ 2.18
PTCH1-210ENST00000468211 B4GALT4O60513 344 aa28.65■■■□□ 2.18
PTCH1-210ENST00000468211 PDE4DQ08499 809 aa28.65■■■□□ 2.18
PTCH1-210ENST00000468211 TTC22Q5TAA0 569 aa28.65■■■□□ 2.18
PTCH1-210ENST00000468211 RASIP1Q5U651 963 aa28.65■■■□□ 2.18
PTCH1-210ENST00000468211 ZNF365Q70YC5 407 aa28.65■■■□□ 2.18
PTCH1-210ENST00000468211 HIPK3Q9H422 1215 aa28.65■■■□□ 2.18
PTCH1-210ENST00000468211 CTNNA3Q9UI47 895 aa28.65■■■□□ 2.18
PTCH1-210ENST00000468211 GBF1Q92538 1859 aa28.65■■■□□ 2.18
PTCH1-210ENST00000468211 KIAA1217Q5T5P2 1943 aa28.65■■■□□ 2.18
PTCH1-210ENST00000468211 CUL9Q8IWT3 2517 aa28.65■■■□□ 2.18
PTCH1-210ENST00000468211 GRXCR1A8MXD5 290 aa28.64■■■□□ 2.18
PTCH1-210ENST00000468211 RGS22Q8NE09 1264 aa28.64■■■□□ 2.18
PTCH1-210ENST00000468211 DNERQ8NFT8 737 aa28.64■■■□□ 2.18
PTCH1-210ENST00000468211 COPS5Q92905 334 aa28.64■■■□□ 2.18
PTCH1-210ENST00000468211 PRUNE2Q8WUY3 3088 aa28.63■■■□□ 2.17
PTCH1-210ENST00000468211 DNAJB2P25686 324 aa28.63■■■□□ 2.17
PTCH1-210ENST00000468211 PURAQ00577 322 aaKnown RBP28.63■■■□□ 2.17
PTCH1-210ENST00000468211 ASPRV1Q53RT3 343 aa28.63■■■□□ 2.17
PTCH1-210ENST00000468211 OR6J1Q8NGC5 347 aa28.63■■■□□ 2.17
PTCH1-210ENST00000468211 NOC4LQ9BVI4 516 aaKnown RBP28.63■■■□□ 2.17
PTCH1-210ENST00000468211 KRT23Q9C075 422 aa28.63■■■□□ 2.17
PTCH1-210ENST00000468211 COL20A1Q9P218 1284 aa28.63■■■□□ 2.17
PTCH1-210ENST00000468211 MYL3P08590 195 aa28.62■■■□□ 2.17
PTCH1-210ENST00000468211 IRX6P78412 446 aaPredicted RBP28.62■■■□□ 2.17
PTCH1-210ENST00000468211 QRICH1Q2TAL8 776 aa28.62■■■□□ 2.17
PTCH1-210ENST00000468211 CYB5R4Q7L1T6 521 aa28.62■■■□□ 2.17
PTCH1-210ENST00000468211 PPP1R13LQ8WUF5 828 aa28.62■■■□□ 2.17
PTCH1-210ENST00000468211 WNT8AQ9H1J5 351 aa28.62■■■□□ 2.17
PTCH1-210ENST00000468211 ALDH8A1Q9H2A2 487 aaPredicted RBP28.62■■■□□ 2.17
PTCH1-210ENST00000468211 JMJD4Q9H9V9 463 aa28.62■■■□□ 2.17
PTCH1-210ENST00000468211 VAT1LQ9HCJ6 419 aa28.62■■■□□ 2.17
PTCH1-210ENST00000468211 IL23AQ9NPF7 189 aa28.62■■■□□ 2.17
PTCH1-210ENST00000468211 SCN5AQ14524 2016 aa28.61■■■□□ 2.17
PTCH1-210ENST00000468211 ARIH2O95376 493 aa28.61■■■□□ 2.17
PTCH1-210ENST00000468211 PARP1P09874 1014 aaKnown RBP28.61■■■□□ 2.17
PTCH1-210ENST00000468211 PBX2P40425 430 aa28.61■■■□□ 2.17
PTCH1-210ENST00000468211 CCL23P55773 120 aa28.61■■■□□ 2.17
PTCH1-210ENST00000468211 PPP2R5BQ15173 497 aa28.61■■■□□ 2.17
PTCH1-210ENST00000468211 SEC23AQ15436 765 aa28.61■■■□□ 2.17
PTCH1-210ENST00000468211 STAG2Q8N3U4 1231 aa28.61■■■□□ 2.17
PTCH1-210ENST00000468211 SYTL5Q8TDW5 730 aaPredicted RBP28.61■■■□□ 2.17
PTCH1-210ENST00000468211 TAAR1Q96RJ0 339 aa28.61■■■□□ 2.17
PTCH1-210ENST00000468211 CNNM2Q9H8M5 875 aa28.61■■■□□ 2.17
PTCH1-210ENST00000468211 POLR3EQ9NVU0 708 aa28.61■■■□□ 2.17
PTCH1-210ENST00000468211 ABCB11O95342 1321 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms