RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 RASIP1Q5U651 963 aa20.32■□□□□ 0.84
TRIM56-203ENST00000467847 SEZ6LQ9BYH1 1024 aa20.32■□□□□ 0.84
TRIM56-203ENST00000467847 LNPKQ9C0E8 428 aa20.32■□□□□ 0.84
TRIM56-203ENST00000467847 IL23AQ9NPF7 189 aa20.32■□□□□ 0.84
TRIM56-203ENST00000467847 GRIN2DO15399 1336 aa20.31■□□□□ 0.84
TRIM56-203ENST00000467847 GRXCR1A8MXD5 290 aa20.31■□□□□ 0.84
TRIM56-203ENST00000467847 ALDH5A1P51649 535 aaPredicted RBP20.31■□□□□ 0.84
TRIM56-203ENST00000467847 PSMC6P62333 389 aa20.31■□□□□ 0.84
TRIM56-203ENST00000467847 DUSP28Q4G0W2 176 aa20.31■□□□□ 0.84
TRIM56-203ENST00000467847 MFSD6Q6ZSS7 791 aa20.31■□□□□ 0.84
TRIM56-203ENST00000467847 RILPL2Q969X0 211 aa20.31■□□□□ 0.84
TRIM56-203ENST00000467847 PCP11498 1178 aaKnown RBP20.3■□□□□ 0.84
TRIM56-203ENST00000467847 CALML3P27482 149 aa20.3■□□□□ 0.84
TRIM56-203ENST00000467847 PBX2P40425 430 aa20.3■□□□□ 0.84
TRIM56-203ENST00000467847 AKNAD1Q5T1N1 836 aa20.3■□□□□ 0.84
TRIM56-203ENST00000467847 SLC30A10Q6XR72 485 aa20.3■□□□□ 0.84
TRIM56-203ENST00000467847 TTC14Q96N46 770 aa20.3■□□□□ 0.84
TRIM56-203ENST00000467847 PBX4Q9BYU1 374 aa20.3■□□□□ 0.84
TRIM56-203ENST00000467847 WDR11Q9BZH6 1224 aa20.3■□□□□ 0.84
TRIM56-203ENST00000467847 TRPV6Q9H1D0 765 aa20.3■□□□□ 0.84
TRIM56-203ENST00000467847 PNMA2Q9UL42 364 aa20.3■□□□□ 0.84
TRIM56-203ENST00000467847 UMODL1Q5DID0 1318 aa20.29■□□□□ 0.84
TRIM56-203ENST00000467847 LOC102724159A0A0B4J2E5 919 aa20.29■□□□□ 0.84
TRIM56-203ENST00000467847 B4GALT4O60513 344 aa20.29■□□□□ 0.84
TRIM56-203ENST00000467847 MFAP1P55081 439 aaKnown RBP20.29■□□□□ 0.84
TRIM56-203ENST00000467847 ZNF543Q08ER8 600 aa20.29■□□□□ 0.84
TRIM56-203ENST00000467847 PWP2Q15269 919 aaKnown RBP20.29■□□□□ 0.84
TRIM56-203ENST00000467847 RNF207Q6ZRF8 634 aa20.29■□□□□ 0.84
TRIM56-203ENST00000467847 TBC1D10CQ8IV04 446 aa20.29■□□□□ 0.84
TRIM56-203ENST00000467847 CLEC4DQ8WXI8 215 aa20.29■□□□□ 0.84
TRIM56-203ENST00000467847 NOC4LQ9BVI4 516 aaKnown RBP20.29■□□□□ 0.84
TRIM56-203ENST00000467847 MTIF3Q9H2K0 278 aaKnown RBP20.29■□□□□ 0.84
TRIM56-203ENST00000467847 RNF41Q9H4P4 317 aaPredicted RBP20.29■□□□□ 0.84
TRIM56-203ENST00000467847 GBF1Q92538 1859 aa20.28■□□□□ 0.84
TRIM56-203ENST00000467847 FGBP02675 491 aa20.28■□□□□ 0.84
TRIM56-203ENST00000467847 CCL23P55773 120 aa20.28■□□□□ 0.84
TRIM56-203ENST00000467847 USP38Q8NB14 1042 aa20.28■□□□□ 0.84
TRIM56-203ENST00000467847 PPM1EQ8WY54 764 aa20.28■□□□□ 0.84
TRIM56-203ENST00000467847 HERVK_113Q902F9 699 aa20.28■□□□□ 0.84
TRIM56-203ENST00000467847 LAMA4Q16363 1823 aa20.27■□□□□ 0.84
TRIM56-203ENST00000467847 CHD9Q3L8U1 2897 aa20.27■□□□□ 0.84
TRIM56-203ENST00000467847 SNHG28P0DPA3 235 aa20.27■□□□□ 0.84
TRIM56-203ENST00000467847 CPT1AP50416 773 aa20.27■□□□□ 0.84
TRIM56-203ENST00000467847 PDE4DQ08499 809 aa20.27■□□□□ 0.84
TRIM56-203ENST00000467847 B4GALNT3Q6L9W6 998 aa20.27■□□□□ 0.84
TRIM56-203ENST00000467847 ESR2Q92731 530 aa20.27■□□□□ 0.84
TRIM56-203ENST00000467847 GAS2L1Q99501 681 aaPredicted RBP20.27■□□□□ 0.84
TRIM56-203ENST00000467847 MPHOSPH6Q99547 160 aaKnown RBP20.27■□□□□ 0.84
TRIM56-203ENST00000467847 ALDH8A1Q9H2A2 487 aaPredicted RBP20.27■□□□□ 0.84
TRIM56-203ENST00000467847 POLR3EQ9NVU0 708 aa20.27■□□□□ 0.84
TRIM56-203ENST00000467847 CXXC1Q9P0U4 656 aaPredicted RBP20.27■□□□□ 0.84
TRIM56-203ENST00000467847 MSRAQ9UJ68 235 aa20.27■□□□□ 0.84
TRIM56-203ENST00000467847 NEDD4P46934 1319 aa20.27■□□□□ 0.83
TRIM56-203ENST00000467847 WDR19Q8NEZ3 1342 aa20.27■□□□□ 0.83
TRIM56-203ENST00000467847 RBM47A0AV96 593 aaKnown RBP20.26■□□□□ 0.83
TRIM56-203ENST00000467847 MYL3P08590 195 aa20.26■□□□□ 0.83
TRIM56-203ENST00000467847 SDSP20132 328 aa20.26■□□□□ 0.83
TRIM56-203ENST00000467847 RPS6P62753 249 aaKnown RBP20.26■□□□□ 0.83
TRIM56-203ENST00000467847 PURAQ00577 322 aaKnown RBP20.26■□□□□ 0.83
TRIM56-203ENST00000467847 RAB30Q15771 203 aa20.26■□□□□ 0.83
TRIM56-203ENST00000467847 OTOP2Q7RTS6 562 aa20.26■□□□□ 0.83
TRIM56-203ENST00000467847 IL27Q8NEV9 243 aa20.26■□□□□ 0.83
TRIM56-203ENST00000467847 OR6J1Q8NGC5 347 aa20.26■□□□□ 0.83
TRIM56-203ENST00000467847 ZKSCAN3Q9BRR0 538 aa20.26■□□□□ 0.83
TRIM56-203ENST00000467847 WNT8AQ9H1J5 351 aa20.26■□□□□ 0.83
TRIM56-203ENST00000467847 RWDD1Q9H446 243 aaPredicted RBP20.26■□□□□ 0.83
TRIM56-203ENST00000467847 RAPGEFL1Q9UHV5 662 aa20.26■□□□□ 0.83
TRIM56-203ENST00000467847 ZNF213O14771 459 aa20.25■□□□□ 0.83
TRIM56-203ENST00000467847 GOLGA8HP0CJ92 632 aa20.25■□□□□ 0.83
TRIM56-203ENST00000467847 AAMPQ13685 434 aa20.25■□□□□ 0.83
TRIM56-203ENST00000467847 PPP2R5BQ15173 497 aa20.25■□□□□ 0.83
TRIM56-203ENST00000467847 GPATCH4Q5T3I0 446 aaKnown RBP20.25■□□□□ 0.83
TRIM56-203ENST00000467847 SMC5Q8IY18 1101 aa20.25■□□□□ 0.83
TRIM56-203ENST00000467847 PRDM12Q9H4Q4 367 aa20.25■□□□□ 0.83
TRIM56-203ENST00000467847 GPHNQ9NQX3 736 aaPredicted RBP20.25■□□□□ 0.83
TRIM56-203ENST00000467847 TRMT13Q9NUP7 481 aaKnown RBP20.25■□□□□ 0.83
TRIM56-203ENST00000467847 RAD50Q92878 1312 aa20.25■□□□□ 0.83
TRIM56-203ENST00000467847 SUPT20HL2P0C7V6 817 aa20.24■□□□□ 0.83
TRIM56-203ENST00000467847 USH1GQ495M9 461 aa20.24■□□□□ 0.83
TRIM56-203ENST00000467847 BRDTQ58F21 947 aaPredicted RBP20.24■□□□□ 0.83
TRIM56-203ENST00000467847 DGKHQ86XP1 1220 aa20.24■□□□□ 0.83
TRIM56-203ENST00000467847 RPUSD2Q8IZ73 545 aaKnown RBP20.24■□□□□ 0.83
TRIM56-203ENST00000467847 DNERQ8NFT8 737 aa20.24■□□□□ 0.83
TRIM56-203ENST00000467847 ATXN2LQ8WWM7 1075 aaKnown RBP20.24■□□□□ 0.83
TRIM56-203ENST00000467847 SCN10AQ9Y5Y9 1956 aa20.24■□□□□ 0.83
TRIM56-203ENST00000467847 B4DLN1 442 aa20.23■□□□□ 0.83
TRIM56-203ENST00000467847 NKRFO15226 690 aaKnown RBP eCLIP20.23■□□□□ 0.83
TRIM56-203ENST00000467847 EDNRBP24530 442 aa20.23■□□□□ 0.83
TRIM56-203ENST00000467847 MRPL12P52815 198 aaKnown RBP20.23■□□□□ 0.83
TRIM56-203ENST00000467847 CWC27Q6UX04 472 aaKnown RBP20.23■□□□□ 0.83
TRIM56-203ENST00000467847 CHD1LQ86WJ1 897 aa20.23■□□□□ 0.83
TRIM56-203ENST00000467847 IQCA1Q86XH1 822 aa20.23■□□□□ 0.83
TRIM56-203ENST00000467847 PLEKHM2Q8IWE5 1019 aa20.23■□□□□ 0.83
TRIM56-203ENST00000467847 SCFD2Q8WU76 684 aa20.23■□□□□ 0.83
TRIM56-203ENST00000467847 FAM122AQ96E09 287 aa20.23■□□□□ 0.83
TRIM56-203ENST00000467847 SCLYQ96I15 445 aa20.23■□□□□ 0.83
TRIM56-203ENST00000467847 MTG1Q9BT17 334 aaPredicted RBP20.23■□□□□ 0.83
TRIM56-203ENST00000467847 CPVLQ9H3G5 476 aa20.23■□□□□ 0.83
TRIM56-203ENST00000467847 DIAPH3Q9NSV4 1193 aa20.23■□□□□ 0.83
TRIM56-203ENST00000467847 THEGQ9P2T0 379 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms