RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 PWP2Q15269 919 aaKnown RBP22.48■■□□□ 1.19
COL9A3-206ENST00000466532 RNF207Q6ZRF8 634 aa22.48■■□□□ 1.19
COL9A3-206ENST00000466532 DGKHQ86XP1 1220 aa22.48■■□□□ 1.19
COL9A3-206ENST00000466532 SLC43A3Q8NBI5 491 aa22.48■■□□□ 1.19
COL9A3-206ENST00000466532 CLEC4DQ8WXI8 215 aa22.48■■□□□ 1.19
COL9A3-206ENST00000466532 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.48■■□□□ 1.195e-22■□□□□ 10.1
COL9A3-206ENST00000466532 WDR19Q8NEZ3 1342 aa22.48■■□□□ 1.19
COL9A3-206ENST00000466532 KDM4AO75164 1064 aa22.47■■□□□ 1.19
COL9A3-206ENST00000466532 GOLGA8HP0CJ92 632 aa22.47■■□□□ 1.19
COL9A3-206ENST00000466532 NT5C2P49902 561 aa22.47■■□□□ 1.19
COL9A3-206ENST00000466532 ITGA7Q13683 1181 aa22.47■■□□□ 1.19
COL9A3-206ENST00000466532 DUSP28Q4G0W2 176 aa22.47■■□□□ 1.19
COL9A3-206ENST00000466532 GPATCH4Q5T3I0 446 aaKnown RBP22.47■■□□□ 1.19
COL9A3-206ENST00000466532 IQCA1Q86XH1 822 aa22.47■■□□□ 1.19
COL9A3-206ENST00000466532 TMEM199Q8N511 208 aa22.47■■□□□ 1.19
COL9A3-206ENST00000466532 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.46■■□□□ 1.19
COL9A3-206ENST00000466532 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.46■■□□□ 1.19
COL9A3-206ENST00000466532 CSF2RAP15509 400 aa22.46■■□□□ 1.19
COL9A3-206ENST00000466532 CCDC178Q5BJE1 867 aa22.46■■□□□ 1.19
COL9A3-206ENST00000466532 PNMA1Q8ND90 353 aa22.46■■□□□ 1.19
COL9A3-206ENST00000466532 DSCC1Q9BVC3 393 aa22.46■■□□□ 1.19
COL9A3-206ENST00000466532 WDR11Q9BZH6 1224 aa22.46■■□□□ 1.19
COL9A3-206ENST00000466532 TMEM265A0A087WTH1 108 aa22.45■■□□□ 1.18
COL9A3-206ENST00000466532 B4E1Z4 1266 aa22.45■■□□□ 1.18
COL9A3-206ENST00000466532 RPS6P62753 249 aaKnown RBP22.45■■□□□ 1.18
COL9A3-206ENST00000466532 USH1GQ495M9 461 aa22.45■■□□□ 1.18
COL9A3-206ENST00000466532 C16orf59Q7L2K0 433 aa22.45■■□□□ 1.18
COL9A3-206ENST00000466532 MPHOSPH6Q99547 160 aaKnown RBP22.45■■□□□ 1.18
COL9A3-206ENST00000466532 UBA5Q9GZZ9 404 aa22.45■■□□□ 1.18
COL9A3-206ENST00000466532 CPVLQ9H3G5 476 aa22.45■■□□□ 1.18
COL9A3-206ENST00000466532 KAT14Q9H8E8 782 aa22.45■■□□□ 1.18
COL9A3-206ENST00000466532 GRIN2DO15399 1336 aa22.45■■□□□ 1.18
COL9A3-206ENST00000466532 UNC80Q8N2C7 3258 aa22.45■■□□□ 1.18
COL9A3-206ENST00000466532 SCN10AQ9Y5Y9 1956 aa22.45■■□□□ 1.18
COL9A3-206ENST00000466532 CYP2C18P33260 490 aa22.44■■□□□ 1.18
COL9A3-206ENST00000466532 PSMC6P62333 389 aa22.44■■□□□ 1.18
COL9A3-206ENST00000466532 PDE4DQ08499 809 aa22.44■■□□□ 1.18
COL9A3-206ENST00000466532 IMMTQ16891 758 aaKnown RBP22.44■■□□□ 1.18
COL9A3-206ENST00000466532 TMEM240Q5SV17 173 aa22.44■■□□□ 1.18
COL9A3-206ENST00000466532 MYLIPQ8WY64 445 aa22.44■■□□□ 1.18
COL9A3-206ENST00000466532 ZSCAN10Q96SZ4 725 aaPredicted RBP22.44■■□□□ 1.18
COL9A3-206ENST00000466532 SEZ6LQ9BYH1 1024 aa22.44■■□□□ 1.18
COL9A3-206ENST00000466532 SCN5AQ14524 2016 aa22.43■■□□□ 1.18
COL9A3-206ENST00000466532 MYH7BA7E2Y1 1941 aa22.43■■□□□ 1.18
COL9A3-206ENST00000466532 A0A0C4DFX4 3053 aa22.43■■□□□ 1.18
COL9A3-206ENST00000466532 RBM47A0AV96 593 aaKnown RBP22.43■■□□□ 1.18
COL9A3-206ENST00000466532 ACRP10323 421 aa22.43■■□□□ 1.18
COL9A3-206ENST00000466532 DNAJB2P25686 324 aa22.43■■□□□ 1.18
COL9A3-206ENST00000466532 PSRC1Q6PGN9 363 aaPredicted RBP22.43■■□□□ 1.18
COL9A3-206ENST00000466532 HIPK3Q9H422 1215 aa22.43■■□□□ 1.18
COL9A3-206ENST00000466532 CTNNA3Q9UI47 895 aa22.43■■□□□ 1.18
COL9A3-206ENST00000466532 CDH23Q9H251 3354 aa22.42■■□□□ 1.18
COL9A3-206ENST00000466532 B4GALT4O60513 344 aa22.42■■□□□ 1.18
COL9A3-206ENST00000466532 CDC37Q16543 378 aaPredicted RBP22.42■■□□□ 1.18
COL9A3-206ENST00000466532 ZNF365Q70YC5 407 aa22.42■■□□□ 1.18
COL9A3-206ENST00000466532 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.42■■□□□ 1.18
COL9A3-206ENST00000466532 ENAHQ8N8S7 591 aaPredicted RBP22.42■■□□□ 1.18
COL9A3-206ENST00000466532 DNERQ8NFT8 737 aa22.42■■□□□ 1.18
COL9A3-206ENST00000466532 OR6J1Q8NGC5 347 aa22.42■■□□□ 1.18
COL9A3-206ENST00000466532 ANKS1AQ92625 1134 aa22.42■■□□□ 1.18
COL9A3-206ENST00000466532 TRPV6Q9H1D0 765 aa22.42■■□□□ 1.18
COL9A3-206ENST00000466532 IL23AQ9NPF7 189 aa22.42■■□□□ 1.18
COL9A3-206ENST00000466532 POLR3EQ9NVU0 708 aa22.42■■□□□ 1.18
COL9A3-206ENST00000466532 ZSWIM5Q9P217 1185 aa22.42■■□□□ 1.18
COL9A3-206ENST00000466532 EYSQ5T1H1 3165 aa22.42■■□□□ 1.18
COL9A3-206ENST00000466532 TNKSO95271 1327 aa22.41■■□□□ 1.18
COL9A3-206ENST00000466532 UMODL1Q5DID0 1318 aa22.41■■□□□ 1.18
COL9A3-206ENST00000466532 EDNRBP24530 442 aa22.41■■□□□ 1.18
COL9A3-206ENST00000466532 CPT1AP50416 773 aa22.41■■□□□ 1.18
COL9A3-206ENST00000466532 ASPRV1Q53RT3 343 aa22.41■■□□□ 1.18
COL9A3-206ENST00000466532 MAFAQ8NHW3 353 aaPredicted RBP22.41■■□□□ 1.18
COL9A3-206ENST00000466532 KRT23Q9C075 422 aa22.41■■□□□ 1.18
COL9A3-206ENST00000466532 B4DLN1 442 aa22.4■■□□□ 1.18
COL9A3-206ENST00000466532 MYL3P08590 195 aa22.4■■□□□ 1.18
COL9A3-206ENST00000466532 FOSL2P15408 326 aa22.4■■□□□ 1.18
COL9A3-206ENST00000466532 MRPL12P52815 198 aaKnown RBP22.4■■□□□ 1.18
COL9A3-206ENST00000466532 PPP2R5BQ15173 497 aa22.4■■□□□ 1.18
COL9A3-206ENST00000466532 RASIP1Q5U651 963 aa22.4■■□□□ 1.18
COL9A3-206ENST00000466532 ADGRF4Q8IZF3 695 aa22.4■■□□□ 1.18
COL9A3-206ENST00000466532 RGS22Q8NE09 1264 aa22.4■■□□□ 1.18
COL9A3-206ENST00000466532 CNNM2Q9H8M5 875 aa22.4■■□□□ 1.18
COL9A3-206ENST00000466532 TANC1Q9C0D5 1861 aa22.4■■□□□ 1.18
COL9A3-206ENST00000466532 MYO9BQ13459 2157 aa22.39■■□□□ 1.18
COL9A3-206ENST00000466532 ABCB11O95342 1321 aa22.39■■□□□ 1.18
COL9A3-206ENST00000466532 NKRFO15226 690 aaKnown RBP eCLIP22.39■■□□□ 1.17
COL9A3-206ENST00000466532 DHX16O60231 1041 aaKnown RBP22.39■■□□□ 1.17
COL9A3-206ENST00000466532 PURAQ00577 322 aaKnown RBP22.39■■□□□ 1.17
COL9A3-206ENST00000466532 BRDTQ58F21 947 aaPredicted RBP22.39■■□□□ 1.17
COL9A3-206ENST00000466532 SCFD2Q8WU76 684 aa22.39■■□□□ 1.17
COL9A3-206ENST00000466532 TIFAQ96CG3 184 aa22.39■■□□□ 1.17
COL9A3-206ENST00000466532 UBAC1Q9BSL1 405 aa22.39■■□□□ 1.17
COL9A3-206ENST00000466532 NOC4LQ9BVI4 516 aaKnown RBP22.39■■□□□ 1.17
COL9A3-206ENST00000466532 IL25Q9H293 177 aa22.39■■□□□ 1.17
COL9A3-206ENST00000466532 ALDH8A1Q9H2A2 487 aaPredicted RBP22.39■■□□□ 1.17
COL9A3-206ENST00000466532 GPHNQ9NQX3 736 aaPredicted RBP22.39■■□□□ 1.17
COL9A3-206ENST00000466532 TRIP12Q14669 1992 aaPredicted RBP22.39■■□□□ 1.17
COL9A3-206ENST00000466532 RAD50Q92878 1312 aa22.38■■□□□ 1.17
COL9A3-206ENST00000466532 GRXCR1A8MXD5 290 aa22.38■■□□□ 1.17
COL9A3-206ENST00000466532 PARP1P09874 1014 aaKnown RBP22.38■■□□□ 1.17
COL9A3-206ENST00000466532 CCL23P55773 120 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 202.4 ms