RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 EVI5O60447 810 aa12.4□□□□□ -0.42
NPHP3-203ENST00000465756 DUSP11O75319 330 aaKnown RBP12.4□□□□□ -0.42
NPHP3-203ENST00000465756 TRIM29Q14134 588 aa12.4□□□□□ -0.42
NPHP3-203ENST00000465756 MAP3K21Q5TCX8 1036 aa12.4□□□□□ -0.42
NPHP3-203ENST00000465756 GIMAP8Q8ND71 665 aaPredicted RBP12.4□□□□□ -0.42
NPHP3-203ENST00000465756 LY9Q9HBG7 655 aa12.4□□□□□ -0.42
NPHP3-203ENST00000465756 ZNF236Q9UL36 1845 aa12.4□□□□□ -0.42
NPHP3-203ENST00000465756 DNM1LO00429 736 aa12.4□□□□□ -0.42
NPHP3-203ENST00000465756 NAPAP54920 295 aa12.4□□□□□ -0.42
NPHP3-203ENST00000465756 TNFAIP2Q03169 654 aa12.4□□□□□ -0.42
NPHP3-203ENST00000465756 SLKQ9H2G2 1235 aaPredicted RBP12.4□□□□□ -0.42
NPHP3-203ENST00000465756 MOXD2PA6NHM9 499 aa12.4□□□□□ -0.42
NPHP3-203ENST00000465756 PGK2P07205 417 aa12.4□□□□□ -0.42
NPHP3-203ENST00000465756 MTFR1Q15390 333 aa12.4□□□□□ -0.42
NPHP3-203ENST00000465756 NPLOC4Q8TAT6 608 aa12.4□□□□□ -0.42
NPHP3-203ENST00000465756 IGDCC4Q8TDY8 1250 aa12.4□□□□□ -0.42
NPHP3-203ENST00000465756 RIOX1Q9H6W3 641 aa12.4□□□□□ -0.42
NPHP3-203ENST00000465756 CYP39A1Q9NYL5 469 aa12.4□□□□□ -0.42
NPHP3-203ENST00000465756 ST18O60284 1047 aa12.39□□□□□ -0.43
NPHP3-203ENST00000465756 CPT1AP50416 773 aa12.39□□□□□ -0.43
NPHP3-203ENST00000465756 FAM133AQ8N9E0 248 aa12.39□□□□□ -0.43
NPHP3-203ENST00000465756 JMJD4Q9H9V9 463 aa12.39□□□□□ -0.43
NPHP3-203ENST00000465756 COBLO75128 1261 aa12.39□□□□□ -0.43
NPHP3-203ENST00000465756 CYBAP13498 195 aa12.39□□□□□ -0.43
NPHP3-203ENST00000465756 ZNF76P36508 570 aa12.39□□□□□ -0.43
NPHP3-203ENST00000465756 SSRP1Q08945 709 aaKnown RBP12.39□□□□□ -0.43
NPHP3-203ENST00000465756 Q6ZUG5 572 aa12.39□□□□□ -0.43
NPHP3-203ENST00000465756 RMDN3Q96TC7 470 aa12.39□□□□□ -0.43
NPHP3-203ENST00000465756 NAP1L4Q99733 375 aaKnown RBP12.39□□□□□ -0.43
NPHP3-203ENST00000465756 OGDHLQ9ULD0 1010 aa12.39□□□□□ -0.43
NPHP3-203ENST00000465756 SNX14Q9Y5W7 946 aa12.39□□□□□ -0.43
NPHP3-203ENST00000465756 APOA5Q6Q788 366 aa12.39□□□□□ -0.43
NPHP3-203ENST00000465756 RUFY3Q7L099 469 aa12.39□□□□□ -0.43
NPHP3-203ENST00000465756 CHST3Q7LGC8 479 aa12.39□□□□□ -0.43
NPHP3-203ENST00000465756 HEATR3Q7Z4Q2 680 aa12.39□□□□□ -0.43
NPHP3-203ENST00000465756 ZSCAN31Q96LW9 406 aaPredicted RBP12.39□□□□□ -0.43
NPHP3-203ENST00000465756 SRCAPQ6ZRS2 3230 aa12.39□□□□□ -0.43
NPHP3-203ENST00000465756 ALDH5A1P51649 535 aaPredicted RBP12.38□□□□□ -0.43
NPHP3-203ENST00000465756 TMTC3Q6ZXV5 915 aa12.38□□□□□ -0.43
NPHP3-203ENST00000465756 BRF1Q92994 677 aa12.38□□□□□ -0.43
NPHP3-203ENST00000465756 PIGSQ96S52 555 aa12.38□□□□□ -0.43
NPHP3-203ENST00000465756 DCDC2CA8MYV0 355 aa12.38□□□□□ -0.43
NPHP3-203ENST00000465756 CTGFP29279 349 aa12.38□□□□□ -0.43
NPHP3-203ENST00000465756 ADCY7P51828 1080 aa12.38□□□□□ -0.43
NPHP3-203ENST00000465756 TROAPQ12815 778 aa12.38□□□□□ -0.43
NPHP3-203ENST00000465756 KCNB2Q92953 911 aa12.38□□□□□ -0.43
NPHP3-203ENST00000465756 CRISPLD2Q9H0B8 497 aa12.38□□□□□ -0.43
NPHP3-203ENST00000465756 PRPF38BQ5VTL8 546 aaKnown RBP12.38□□□□□ -0.43
NPHP3-203ENST00000465756 CCDC155Q8N6L0 562 aa12.38□□□□□ -0.43
NPHP3-203ENST00000465756 KATNAL1Q9BW62 490 aa12.38□□□□□ -0.43
NPHP3-203ENST00000465756 MTIF3Q9H2K0 278 aaKnown RBP12.38□□□□□ -0.43
NPHP3-203ENST00000465756 PSTPIP2Q9H939 334 aa12.38□□□□□ -0.43
NPHP3-203ENST00000465756 DNAJC25-GNG10A0A024R161 153 aa12.37□□□□□ -0.43
NPHP3-203ENST00000465756 MCM2P49736 904 aa12.37□□□□□ -0.43
NPHP3-203ENST00000465756 RPS6P62753 249 aaKnown RBP12.37□□□□□ -0.43
NPHP3-203ENST00000465756 SAFBQ15424 915 aaKnown RBP eCLIP12.37□□□□□ -0.43
NPHP3-203ENST00000465756 CCL14Q16627 93 aa12.37□□□□□ -0.43
NPHP3-203ENST00000465756 GALNT17Q6IS24 598 aa12.37□□□□□ -0.43
NPHP3-203ENST00000465756 STOX1Q6ZVD7 989 aa12.37□□□□□ -0.43
NPHP3-203ENST00000465756 USP26Q9BXU7 913 aa12.37□□□□□ -0.43
NPHP3-203ENST00000465756 MAD2L2Q9UI95 211 aa12.37□□□□□ -0.43
NPHP3-203ENST00000465756 MRVI1Q9Y6F6 885 aa12.37□□□□□ -0.43
NPHP3-203ENST00000465756 EIF3JO75822 258 aaKnown RBP12.37□□□□□ -0.43
NPHP3-203ENST00000465756 GH1P01241 217 aa12.37□□□□□ -0.43
NPHP3-203ENST00000465756 AP3B2Q13367 1082 aa12.37□□□□□ -0.43
NPHP3-203ENST00000465756 ZNF274Q96GC6 653 aaPredicted RBP12.37□□□□□ -0.43
NPHP3-203ENST00000465756 C6orf222P0C671 652 aaPredicted RBP12.37□□□□□ -0.43
NPHP3-203ENST00000465756 EN2P19622 333 aaPredicted RBP12.37□□□□□ -0.43
NPHP3-203ENST00000465756 MYCLP12524 364 aaPredicted RBP12.36□□□□□ -0.43
NPHP3-203ENST00000465756 SNAP25P60880 206 aa12.36□□□□□ -0.43
NPHP3-203ENST00000465756 NEDD9Q14511 834 aa12.36□□□□□ -0.43
NPHP3-203ENST00000465756 FCHSD1Q86WN1 690 aa12.36□□□□□ -0.43
NPHP3-203ENST00000465756 FBXL16Q8N461 479 aa12.36□□□□□ -0.43
NPHP3-203ENST00000465756 RNF26Q9BY78 433 aaPredicted RBP12.36□□□□□ -0.43
NPHP3-203ENST00000465756 STARD7Q9NQZ5 370 aa12.36□□□□□ -0.43
NPHP3-203ENST00000465756 A0A0G2JMZ2 1700 aa12.36□□□□□ -0.43
NPHP3-203ENST00000465756 ANTXR2P58335 489 aa12.36□□□□□ -0.43
NPHP3-203ENST00000465756 OR6J1Q8NGC5 347 aa12.36□□□□□ -0.43
NPHP3-203ENST00000465756 PIBF1Q8WXW3 757 aa12.36□□□□□ -0.43
NPHP3-203ENST00000465756 ZSWIM6Q9HCJ5 1215 aa12.36□□□□□ -0.43
NPHP3-203ENST00000465756 NOD1Q9Y239 953 aa12.36□□□□□ -0.43
NPHP3-203ENST00000465756 PLXNB2O15031 1838 aa12.36□□□□□ -0.43
NPHP3-203ENST00000465756 EXOSC10Q01780 885 aaKnown RBP12.36□□□□□ -0.43
NPHP3-203ENST00000465756 CCDC144CPQ8IYA2 1237 aa12.36□□□□□ -0.43
NPHP3-203ENST00000465756 RIPK3Q9Y572 518 aa12.36□□□□□ -0.43
NPHP3-203ENST00000465756 A0A0U1RQG5 324 aaPredicted RBP12.35□□□□□ -0.43
NPHP3-203ENST00000465756 POTEFA5A3E0 1075 aa12.35□□□□□ -0.43
NPHP3-203ENST00000465756 NOP56O00567 594 aaKnown RBP12.35□□□□□ -0.43
NPHP3-203ENST00000465756 SUPT20HL2P0C7V6 817 aa12.35□□□□□ -0.43
NPHP3-203ENST00000465756 TGFB3P10600 412 aa12.35□□□□□ -0.43
NPHP3-203ENST00000465756 CCND3P30281 292 aaPredicted RBP12.35□□□□□ -0.43
NPHP3-203ENST00000465756 ANP32AP39687 249 aaKnown RBP12.35□□□□□ -0.43
NPHP3-203ENST00000465756 LAMC2Q13753 1193 aa12.35□□□□□ -0.43
NPHP3-203ENST00000465756 RABEP1Q15276 862 aa12.35□□□□□ -0.43
NPHP3-203ENST00000465756 GNASQ5JWF2 1037 aa12.35□□□□□ -0.43
NPHP3-203ENST00000465756 PAWRQ96IZ0 340 aaKnown RBP12.35□□□□□ -0.43
NPHP3-203ENST00000465756 ZNF536O15090 1300 aa12.35□□□□□ -0.43
NPHP3-203ENST00000465756 MARCH6O60337 910 aa12.35□□□□□ -0.43
NPHP3-203ENST00000465756 DEXIO95424 95 aa12.35□□□□□ -0.43
NPHP3-203ENST00000465756 SYTL5Q8TDW5 730 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms