RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 EEF1DP3Q658K8 133 aa4.86□□□□□ -1.63
SNX4-202ENST00000465505 ARHGEF39Q8N4T4 335 aa4.86□□□□□ -1.63
SNX4-202ENST00000465505 C19orf47Q8N9M1 422 aaKnown RBP4.86□□□□□ -1.63
SNX4-202ENST00000465505 RGS22Q8NE09 1264 aa4.86□□□□□ -1.63
SNX4-202ENST00000465505 ADCY4Q8NFM4 1077 aa4.86□□□□□ -1.63
SNX4-202ENST00000465505 RASGRP4Q8TDF6 673 aa4.86□□□□□ -1.63
SNX4-202ENST00000465505 FNIP1Q8TF40 1166 aa4.86□□□□□ -1.63
SNX4-202ENST00000465505 SPATA32Q96LK8 384 aa4.86□□□□□ -1.63
SNX4-202ENST00000465505 CHMP4AQ9BY43 222 aa4.86□□□□□ -1.63
SNX4-202ENST00000465505 PHAXQ9H814 394 aaKnown RBP4.86□□□□□ -1.63
SNX4-202ENST00000465505 SLC12A7Q9Y666 1083 aa4.86□□□□□ -1.63
SNX4-202ENST00000465505 PLA2G1BP04054 148 aaKnown RBP4.85□□□□□ -1.63
SNX4-202ENST00000465505 EPHX1P07099 455 aa4.85□□□□□ -1.63
SNX4-202ENST00000465505 SLURP1P55000 103 aa4.85□□□□□ -1.63
SNX4-202ENST00000465505 MFAP1P55081 439 aaKnown RBP4.85□□□□□ -1.63
SNX4-202ENST00000465505 HTRA3P83110 453 aa4.85□□□□□ -1.63
SNX4-202ENST00000465505 HEATR6Q6AI08 1181 aaKnown RBP4.85□□□□□ -1.63
SNX4-202ENST00000465505 FRMD5Q7Z6J6 570 aa4.85□□□□□ -1.63
SNX4-202ENST00000465505 ADAT2Q7Z6V5 191 aaKnown RBP4.85□□□□□ -1.63
SNX4-202ENST00000465505 KLHL6Q8WZ60 621 aa4.85□□□□□ -1.63
SNX4-202ENST00000465505 RCC1LQ96I51 464 aaKnown RBP4.85□□□□□ -1.63
SNX4-202ENST00000465505 FGD4Q96M96 766 aa4.85□□□□□ -1.63
SNX4-202ENST00000465505 RNF38Q9H0F5 515 aa4.85□□□□□ -1.63
SNX4-202ENST00000465505 ADAM7Q9H2U9 754 aa4.85□□□□□ -1.63
SNX4-202ENST00000465505 FBLN5Q9UBX5 448 aa4.85□□□□□ -1.63
SNX4-202ENST00000465505 SUSD2Q9UGT4 822 aa4.85□□□□□ -1.63
SNX4-202ENST00000465505 C2orf71A6NGG8 1288 aa4.84□□□□□ -1.63
SNX4-202ENST00000465505 PPM1BO75688 479 aa4.84□□□□□ -1.63
SNX4-202ENST00000465505 ASGR2P07307 311 aa4.84□□□□□ -1.63
SNX4-202ENST00000465505 NCAM1P13591 858 aa4.84□□□□□ -1.63
SNX4-202ENST00000465505 CDK11BP21127 795 aaKnown RBP4.84□□□□□ -1.63
SNX4-202ENST00000465505 KCNC1P48547 511 aa4.84□□□□□ -1.63
SNX4-202ENST00000465505 SLC7A5Q01650 507 aa4.84□□□□□ -1.63
SNX4-202ENST00000465505 DPY19L1Q2PZI1 675 aa4.84□□□□□ -1.63
SNX4-202ENST00000465505 TAF7LQ5H9L4 462 aa4.84□□□□□ -1.63
SNX4-202ENST00000465505 ZNF513Q8N8E2 541 aaPredicted RBP4.84□□□□□ -1.63
SNX4-202ENST00000465505 OR6P1Q8NGX9 317 aa4.84□□□□□ -1.63
SNX4-202ENST00000465505 TEPSINQ96N21 525 aa4.84□□□□□ -1.63
SNX4-202ENST00000465505 GBP3Q9H0R5 595 aa4.84□□□□□ -1.63
SNX4-202ENST00000465505 RXFP1Q9HBX9 757 aa4.84□□□□□ -1.63
SNX4-202ENST00000465505 CGGBP1Q9UFW8 167 aaPredicted RBP4.84□□□□□ -1.63
SNX4-202ENST00000465505 DBR1Q9UK59 544 aaKnown RBP4.84□□□□□ -1.63
SNX4-202ENST00000465505 STXBP3O00186 592 aa4.83□□□□□ -1.64
SNX4-202ENST00000465505 CELA3BP08861 270 aa4.83□□□□□ -1.64
SNX4-202ENST00000465505 HSP90B1P14625 803 aaKnown RBP4.83□□□□□ -1.64
SNX4-202ENST00000465505 MC3RP41968 323 aa4.83□□□□□ -1.64
SNX4-202ENST00000465505 GJA8P48165 433 aa4.83□□□□□ -1.64
SNX4-202ENST00000465505 SEPHS1P49903 392 aa4.83□□□□□ -1.64
SNX4-202ENST00000465505 CASP7P55210 303 aa4.83□□□□□ -1.64
SNX4-202ENST00000465505 KRTAP10-2P60368 255 aa4.83□□□□□ -1.64
SNX4-202ENST00000465505 DLX2Q07687 328 aaPredicted RBP4.83□□□□□ -1.64
SNX4-202ENST00000465505 SAPCD2Q86UD0 394 aa4.83□□□□□ -1.64
SNX4-202ENST00000465505 CPNE8Q86YQ8 564 aa4.83□□□□□ -1.64
SNX4-202ENST00000465505 ADGRG2Q8IZP9 1017 aa4.83□□□□□ -1.64
SNX4-202ENST00000465505 LZTR1Q8N653 840 aa4.83□□□□□ -1.64
SNX4-202ENST00000465505 ZNF526Q8TF50 670 aaPredicted RBP4.83□□□□□ -1.64
SNX4-202ENST00000465505 GPRASP2Q96D09 838 aa4.83□□□□□ -1.64
SNX4-202ENST00000465505 TSPAN17Q96FV3 270 aa4.83□□□□□ -1.64
SNX4-202ENST00000465505 SHDQ96IW2 340 aa4.83□□□□□ -1.64
SNX4-202ENST00000465505 MTA3Q9BTC8 594 aa4.83□□□□□ -1.64
SNX4-202ENST00000465505 BCAS3Q9H6U6 928 aa4.83□□□□□ -1.64
SNX4-202ENST00000465505 RWDD3Q9Y3V2 267 aa4.83□□□□□ -1.64
SNX4-202ENST00000465505 BACE2Q9Y5Z0 518 aa4.83□□□□□ -1.64
SNX4-202ENST00000465505 A0A1B0GTL3 188 aa4.82□□□□□ -1.64
SNX4-202ENST00000465505 ZBTB7CA1YPR0 619 aa4.82□□□□□ -1.64
SNX4-202ENST00000465505 SH3D21A4FU49 640 aa4.82□□□□□ -1.64
SNX4-202ENST00000465505 PRICKLE3O43900 615 aaPredicted RBP4.82□□□□□ -1.64
SNX4-202ENST00000465505 PMLP29590 882 aa4.82□□□□□ -1.64
SNX4-202ENST00000465505 AMPD2Q01433 879 aa4.82□□□□□ -1.64
SNX4-202ENST00000465505 GRB10Q13322 594 aa4.82□□□□□ -1.64
SNX4-202ENST00000465505 PPP2R5EQ16537 467 aa4.82□□□□□ -1.64
SNX4-202ENST00000465505 ZFYVE27Q5T4F4 411 aa4.82□□□□□ -1.64
SNX4-202ENST00000465505 LIPIQ6XZB0 460 aa4.82□□□□□ -1.64
SNX4-202ENST00000465505 B3GNT8Q7Z7M8 397 aa4.82□□□□□ -1.64
SNX4-202ENST00000465505 NT5DC4Q86YG4 428 aa4.82□□□□□ -1.64
SNX4-202ENST00000465505 ALG3Q92685 438 aa4.82□□□□□ -1.64
SNX4-202ENST00000465505 GULP1Q9UBP9 304 aa4.82□□□□□ -1.64
SNX4-202ENST00000465505 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.82□□□□□ -1.64
SNX4-202ENST00000465505 FAN1Q9Y2M0 1017 aa4.82□□□□□ -1.64
SNX4-202ENST00000465505 PMF1-BGLAPU3KQ54 211 aa4.82□□□□□ -1.64
SNX4-202ENST00000465505 C7orf72A4D263 438 aa4.81□□□□□ -1.64
SNX4-202ENST00000465505 PAMP19021 973 aa4.81□□□□□ -1.64
SNX4-202ENST00000465505 NASPP49321 788 aaPredicted RBP4.81□□□□□ -1.64
SNX4-202ENST00000465505 HDLBPQ00341 1268 aaKnown RBP4.81□□□□□ -1.64
SNX4-202ENST00000465505 NFKB2Q00653 900 aa4.81□□□□□ -1.64
SNX4-202ENST00000465505 SLC9A5Q14940 896 aa4.81□□□□□ -1.64
SNX4-202ENST00000465505 C9orf131Q5VYM1 1079 aa4.81□□□□□ -1.64
SNX4-202ENST00000465505 KIAA1211LQ6NV74 962 aa4.81□□□□□ -1.64
SNX4-202ENST00000465505 PRRT2Q7Z6L0 340 aaPredicted RBP4.81□□□□□ -1.64
SNX4-202ENST00000465505 CABP7Q86V35 215 aa4.81□□□□□ -1.64
SNX4-202ENST00000465505 NETO2Q8NC67 525 aa4.81□□□□□ -1.64
SNX4-202ENST00000465505 CPA5Q8WXQ8 436 aa4.81□□□□□ -1.64
SNX4-202ENST00000465505 PEX11GQ96HA9 241 aa4.81□□□□□ -1.64
SNX4-202ENST00000465505 PUS7Q96PZ0 661 aaKnown RBP4.81□□□□□ -1.64
SNX4-202ENST00000465505 JAG2Q9Y219 1238 aa4.81□□□□□ -1.64
SNX4-202ENST00000465505 NPHP3-ACAD11A0A0J9YXS1 232 aa4.8□□□□□ -1.64
SNX4-202ENST00000465505 ANKRD34BA5PLL1 514 aa4.8□□□□□ -1.64
SNX4-202ENST00000465505 RTP5Q14D33 572 aa4.8□□□□□ -1.64
SNX4-202ENST00000465505 ERICH6BQ5W0A0 696 aa4.8□□□□□ -1.64
SNX4-202ENST00000465505 FAM169BQ8N8A8 192 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms