RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 PWP2Q15269 919 aaKnown RBP12.94□□□□□ -0.34
COL11A1-207ENST00000465209 ALX1Q15699 326 aa12.94□□□□□ -0.34
COL11A1-207ENST00000465209 NSMFQ6X4W1 530 aa12.94□□□□□ -0.34
COL11A1-207ENST00000465209 NOL8Q76FK4 1167 aaKnown RBP12.94□□□□□ -0.34
COL11A1-207ENST00000465209 OTOP2Q7RTS6 562 aa12.94□□□□□ -0.34
COL11A1-207ENST00000465209 CLEC4DQ8WXI8 215 aa12.94□□□□□ -0.34
COL11A1-207ENST00000465209 GAS2L1Q99501 681 aaPredicted RBP12.94□□□□□ -0.34
COL11A1-207ENST00000465209 AP5M1Q9H0R1 490 aa12.94□□□□□ -0.34
COL11A1-207ENST00000465209 ISY1Q9ULR0 285 aaKnown RBP12.94□□□□□ -0.34
COL11A1-207ENST00000465209 KIAA1217Q5T5P2 1943 aa12.94□□□□□ -0.34
COL11A1-207ENST00000465209 ZMYM6O95789 1325 aa12.93□□□□□ -0.34
COL11A1-207ENST00000465209 TRIP12Q14669 1992 aaPredicted RBP12.93□□□□□ -0.34
COL11A1-207ENST00000465209 ZEB2O60315 1214 aa12.93□□□□□ -0.34
COL11A1-207ENST00000465209 FGBP02675 491 aa12.93□□□□□ -0.34
COL11A1-207ENST00000465209 EDNRBP24530 442 aa12.93□□□□□ -0.34
COL11A1-207ENST00000465209 SLC16A2P36021 539 aa12.93□□□□□ -0.34
COL11A1-207ENST00000465209 BAATQ14032 418 aaPredicted RBP12.93□□□□□ -0.34
COL11A1-207ENST00000465209 SYDE2Q5VT97 1194 aa12.93□□□□□ -0.34
COL11A1-207ENST00000465209 SLC30A10Q6XR72 485 aa12.93□□□□□ -0.34
COL11A1-207ENST00000465209 ATXN2LQ8WWM7 1075 aaKnown RBP12.93□□□□□ -0.34
COL11A1-207ENST00000465209 SCLYQ96I15 445 aa12.93□□□□□ -0.34
COL11A1-207ENST00000465209 TMEM47Q9BQJ4 181 aa12.93□□□□□ -0.34
COL11A1-207ENST00000465209 TCP11L1Q9NUJ3 509 aa12.93□□□□□ -0.34
COL11A1-207ENST00000465209 TRMT13Q9NUP7 481 aaKnown RBP12.93□□□□□ -0.34
COL11A1-207ENST00000465209 THEGQ9P2T0 379 aa12.93□□□□□ -0.34
COL11A1-207ENST00000465209 PRRC2BQ5JSZ5 2229 aaKnown RBP12.93□□□□□ -0.34
COL11A1-207ENST00000465209 COL4A4P53420 1690 aaPredicted RBP12.93□□□□□ -0.34
COL11A1-207ENST00000465209 A0A0D9SFI3 127 aa12.92□□□□□ -0.34
COL11A1-207ENST00000465209 TNFRSF10AO00220 468 aa12.92□□□□□ -0.34
COL11A1-207ENST00000465209 RANBP6O60518 1105 aaKnown RBP12.92□□□□□ -0.34
COL11A1-207ENST00000465209 SNHG28P0DPA3 235 aa12.92□□□□□ -0.34
COL11A1-207ENST00000465209 PDHBP11177 359 aa12.92□□□□□ -0.34
COL11A1-207ENST00000465209 MYOGP15173 224 aa12.92□□□□□ -0.34
COL11A1-207ENST00000465209 RABGGTBP53611 331 aa12.92□□□□□ -0.34
COL11A1-207ENST00000465209 CCDC96Q2M329 555 aa12.92□□□□□ -0.34
COL11A1-207ENST00000465209 KIAA1211Q6ZU35 1233 aa12.92□□□□□ -0.34
COL11A1-207ENST00000465209 FAM227BQ96M60 508 aa12.92□□□□□ -0.34
COL11A1-207ENST00000465209 ASB2Q96Q27 587 aa12.92□□□□□ -0.34
COL11A1-207ENST00000465209 MTIF3Q9H2K0 278 aaKnown RBP12.92□□□□□ -0.34
COL11A1-207ENST00000465209 MSRAQ9UJ68 235 aa12.92□□□□□ -0.34
COL11A1-207ENST00000465209 TCF20Q9UGU0 1960 aaKnown RBP12.92□□□□□ -0.34
COL11A1-207ENST00000465209 MYH6P13533 1939 aa12.92□□□□□ -0.34
COL11A1-207ENST00000465209 TNKSO95271 1327 aa12.91□□□□□ -0.34
COL11A1-207ENST00000465209 FRMPD2Q68DX3 1309 aaPredicted RBP12.91□□□□□ -0.34
COL11A1-207ENST00000465209 FGAP02671 866 aa12.91□□□□□ -0.34
COL11A1-207ENST00000465209 CYP2C9P11712 490 aa12.91□□□□□ -0.34
COL11A1-207ENST00000465209 TTLL4Q14679 1199 aa12.91□□□□□ -0.34
COL11A1-207ENST00000465209 ZNF589Q86UQ0 364 aaPredicted RBP12.91□□□□□ -0.34
COL11A1-207ENST00000465209 PPM1EQ8WY54 764 aa12.91□□□□□ -0.34
COL11A1-207ENST00000465209 EVI5LQ96CN4 794 aa12.91□□□□□ -0.34
COL11A1-207ENST00000465209 WDR11Q9BZH6 1224 aa12.91□□□□□ -0.34
COL11A1-207ENST00000465209 HELLSQ9NRZ9 838 aa12.91□□□□□ -0.34
COL11A1-207ENST00000465209 ADD3Q9UEY8 706 aaKnown RBP12.91□□□□□ -0.34
COL11A1-207ENST00000465209 MTMR7Q9Y216 660 aa12.91□□□□□ -0.34
COL11A1-207ENST00000465209 WDR19Q8NEZ3 1342 aa12.9□□□□□ -0.34
COL11A1-207ENST00000465209 HSPD1P10809 573 aaKnown RBP12.9□□□□□ -0.34
COL11A1-207ENST00000465209 TOP1P11387 765 aaKnown RBP12.9□□□□□ -0.34
COL11A1-207ENST00000465209 PDE1AP54750 535 aa12.9□□□□□ -0.34
COL11A1-207ENST00000465209 RPS6P62753 249 aaKnown RBP12.9□□□□□ -0.34
COL11A1-207ENST00000465209 SLC28A3Q9HAS3 691 aa12.9□□□□□ -0.34
COL11A1-207ENST00000465209 POLR3EQ9NVU0 708 aa12.9□□□□□ -0.34
COL11A1-207ENST00000465209 PCDHA11Q9Y5I1 949 aa12.9□□□□□ -0.34
COL11A1-207ENST00000465209 PTPDC1A2A3K4 754 aa12.89□□□□□ -0.35
COL11A1-207ENST00000465209 A6NJR5 290 aa12.89□□□□□ -0.35
COL11A1-207ENST00000465209 ARHGEF15O94989 841 aa12.89□□□□□ -0.35
COL11A1-207ENST00000465209 ARIH2O95376 493 aa12.89□□□□□ -0.35
COL11A1-207ENST00000465209 PFKMP08237 780 aa12.89□□□□□ -0.35
COL11A1-207ENST00000465209 CPT1AP50416 773 aa12.89□□□□□ -0.35
COL11A1-207ENST00000465209 ZNF543Q08ER8 600 aa12.89□□□□□ -0.35
COL11A1-207ENST00000465209 PPP2R2DQ66LE6 453 aa12.89□□□□□ -0.35
COL11A1-207ENST00000465209 TBC1D10CQ8IV04 446 aa12.89□□□□□ -0.35
COL11A1-207ENST00000465209 RPUSD2Q8IZ73 545 aaKnown RBP12.89□□□□□ -0.35
COL11A1-207ENST00000465209 OR6J1Q8NGC5 347 aa12.89□□□□□ -0.35
COL11A1-207ENST00000465209 ADAMTS19Q8TE59 1207 aa12.89□□□□□ -0.35
COL11A1-207ENST00000465209 COPS5Q92905 334 aa12.89□□□□□ -0.35
COL11A1-207ENST00000465209 CTAGE1Q96RT6 745 aa12.89□□□□□ -0.35
COL11A1-207ENST00000465209 MTG1Q9BT17 334 aaPredicted RBP12.89□□□□□ -0.35
COL11A1-207ENST00000465209 GPCPD1Q9NPB8 672 aa12.89□□□□□ -0.35
COL11A1-207ENST00000465209 SLC4A7Q9Y6M7 1214 aa12.89□□□□□ -0.35
COL11A1-207ENST00000465209 EPOPA6NHQ4 379 aa12.88□□□□□ -0.35
COL11A1-207ENST00000465209 PITPNM1O00562 1244 aa12.88□□□□□ -0.35
COL11A1-207ENST00000465209 NKRFO15226 690 aaKnown RBP eCLIP12.88□□□□□ -0.35
COL11A1-207ENST00000465209 ATP2A2P16615 1042 aaKnown RBP12.88□□□□□ -0.35
COL11A1-207ENST00000465209 POU3F3P20264 500 aaPredicted RBP12.88□□□□□ -0.35
COL11A1-207ENST00000465209 IGFBP4P22692 258 aa12.88□□□□□ -0.35
COL11A1-207ENST00000465209 CALML3P27482 149 aa12.88□□□□□ -0.35
COL11A1-207ENST00000465209 CCDC85BQ15834 202 aaPredicted RBP12.88□□□□□ -0.35
COL11A1-207ENST00000465209 NBPF20Q3BBV1 942 aa12.88□□□□□ -0.35
COL11A1-207ENST00000465209 MCMDC2Q4G0Z9 681 aa12.88□□□□□ -0.35
COL11A1-207ENST00000465209 RRP12Q5JTH9 1297 aaKnown RBP12.88□□□□□ -0.35
COL11A1-207ENST00000465209 NFRKBQ6P4R8 1299 aa12.88□□□□□ -0.35
COL11A1-207ENST00000465209 RNF207Q6ZRF8 634 aa12.88□□□□□ -0.35
COL11A1-207ENST00000465209 TICAM2Q86XR7 235 aa12.88□□□□□ -0.35
COL11A1-207ENST00000465209 DNERQ8NFT8 737 aa12.88□□□□□ -0.35
COL11A1-207ENST00000465209 PPP1R13LQ8WUF5 828 aa12.88□□□□□ -0.35
COL11A1-207ENST00000465209 NEDD4P46934 1319 aa12.88□□□□□ -0.35
COL11A1-207ENST00000465209 BRWD1Q9NSI6 2320 aa12.87□□□□□ -0.35
COL11A1-207ENST00000465209 CA3P07451 260 aa12.87□□□□□ -0.35
COL11A1-207ENST00000465209 MYL3P08590 195 aa12.87□□□□□ -0.35
COL11A1-207ENST00000465209 IQCF3P0C7M6 154 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms