RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 GGNQ86UU5 652 aa7.48□□□□□ -1.21
UBR4-209ENST00000465036 CABP7Q86V35 215 aa7.48□□□□□ -1.21
UBR4-209ENST00000465036 NETO2Q8NC67 525 aa7.48□□□□□ -1.21
UBR4-209ENST00000465036 SPATA32Q96LK8 384 aa7.48□□□□□ -1.21
UBR4-209ENST00000465036 BACH2Q9BYV9 841 aa7.48□□□□□ -1.21
UBR4-209ENST00000465036 DBR1Q9UK59 544 aaKnown RBP7.48□□□□□ -1.21
UBR4-209ENST00000465036 PPT2Q9UMR5 302 aa7.48□□□□□ -1.21
UBR4-209ENST00000465036 PLA2G2DQ9UNK4 145 aa7.48□□□□□ -1.21
UBR4-209ENST00000465036 RUFY4Q6ZNE9 571 aa7.47□□□□□ -1.21
UBR4-209ENST00000465036 C19orf47Q8N9M1 422 aaKnown RBP7.47□□□□□ -1.21
UBR4-209ENST00000465036 HAUS7Q99871 368 aa7.47□□□□□ -1.21
UBR4-209ENST00000465036 BDH2Q9BUT1 245 aa7.47□□□□□ -1.21
UBR4-209ENST00000465036 KLHL25Q9H0H3 589 aa7.47□□□□□ -1.21
UBR4-209ENST00000465036 PHAXQ9H814 394 aaKnown RBP7.47□□□□□ -1.21
UBR4-209ENST00000465036 LTBP3Q9NS15 1303 aa7.47□□□□□ -1.21
UBR4-209ENST00000465036 ZBTB7AO95365 584 aa7.46□□□□□ -1.22
UBR4-209ENST00000465036 ZNF394Q53GI3 561 aa7.46□□□□□ -1.22
UBR4-209ENST00000465036 FBXW10Q5XX13 1052 aa7.46□□□□□ -1.22
UBR4-209ENST00000465036 ZNF526Q8TF50 670 aaPredicted RBP7.46□□□□□ -1.22
UBR4-209ENST00000465036 ALG3Q92685 438 aa7.46□□□□□ -1.22
UBR4-209ENST00000465036 PEX11GQ96HA9 241 aa7.46□□□□□ -1.22
UBR4-209ENST00000465036 ZDHHC15Q96MV8 337 aa7.46□□□□□ -1.22
UBR4-209ENST00000465036 USP40Q9NVE5 1235 aa7.46□□□□□ -1.22
UBR4-209ENST00000465036 DDX41Q9UJV9 622 aaKnown RBP7.46□□□□□ -1.22
UBR4-209ENST00000465036 NUDT5Q9UKK9 219 aa7.46□□□□□ -1.22
UBR4-209ENST00000465036 DCAF1Q9Y4B6 1507 aa7.46□□□□□ -1.22
UBR4-209ENST00000465036 TACR1P25103 407 aa7.45□□□□□ -1.22
UBR4-209ENST00000465036 GRB10Q13322 594 aa7.45□□□□□ -1.22
UBR4-209ENST00000465036 ZXDCQ2QGD7 858 aaPredicted RBP7.45□□□□□ -1.22
UBR4-209ENST00000465036 NT5DC1Q5TFE4 455 aa7.45□□□□□ -1.22
UBR4-209ENST00000465036 CARFQ8N187 725 aa7.45□□□□□ -1.22
UBR4-209ENST00000465036 LZTR1Q8N653 840 aa7.45□□□□□ -1.22
UBR4-209ENST00000465036 RCC1LQ96I51 464 aaKnown RBP7.45□□□□□ -1.22
UBR4-209ENST00000465036 GBP3Q9H0R5 595 aa7.45□□□□□ -1.22
UBR4-209ENST00000465036 UNC13AQ9UPW8 1703 aa7.44□□□□□ -1.22
UBR4-209ENST00000465036 TRBV23OR9-2A0A075B6M9 112 aa7.44□□□□□ -1.22
UBR4-209ENST00000465036 NOBOXO60393 691 aa7.44□□□□□ -1.22
UBR4-209ENST00000465036 SOX9P48436 509 aa7.44□□□□□ -1.22
UBR4-209ENST00000465036 RACK1P63244 317 aaKnown RBP7.44□□□□□ -1.22
UBR4-209ENST00000465036 UBXN11Q5T124 520 aa7.44□□□□□ -1.22
UBR4-209ENST00000465036 ARHGEF39Q8N4T4 335 aa7.44□□□□□ -1.22
UBR4-209ENST00000465036 OR6P1Q8NGX9 317 aa7.44□□□□□ -1.22
UBR4-209ENST00000465036 SPATA25Q9BR10 227 aa7.44□□□□□ -1.22
UBR4-209ENST00000465036 MTA3Q9BTC8 594 aa7.44□□□□□ -1.22
UBR4-209ENST00000465036 MCMBPQ9BTE3 642 aa7.44□□□□□ -1.22
UBR4-209ENST00000465036 A0A1B0GTL3 188 aa7.43□□□□□ -1.22
UBR4-209ENST00000465036 PPM1BO75688 479 aa7.43□□□□□ -1.22
UBR4-209ENST00000465036 PMLP29590 882 aa7.43□□□□□ -1.22
UBR4-209ENST00000465036 CACNB2Q08289 660 aaPredicted RBP7.43□□□□□ -1.22
UBR4-209ENST00000465036 PPP2R5DQ14738 602 aa7.43□□□□□ -1.22
UBR4-209ENST00000465036 GNPTABQ3T906 1256 aa7.43□□□□□ -1.22
UBR4-209ENST00000465036 HEATR6Q6AI08 1181 aaKnown RBP7.43□□□□□ -1.22
UBR4-209ENST00000465036 ADGRG2Q8IZP9 1017 aa7.43□□□□□ -1.22
UBR4-209ENST00000465036 CRBNQ96SW2 442 aa7.43□□□□□ -1.22
UBR4-209ENST00000465036 FAM86C1Q9NVL1 165 aa7.43□□□□□ -1.22
UBR4-209ENST00000465036 MYRFQ9Y2G1 1151 aa7.43□□□□□ -1.22
UBR4-209ENST00000465036 PCDHGB7Q9Y5F8 929 aa7.43□□□□□ -1.22
UBR4-209ENST00000465036 BACE2Q9Y5Z0 518 aa7.43□□□□□ -1.22
UBR4-209ENST00000465036 K7ESM1 405 aa7.42□□□□□ -1.22
UBR4-209ENST00000465036 MC3RP41968 323 aa7.42□□□□□ -1.22
UBR4-209ENST00000465036 GIPRP48546 466 aa7.42□□□□□ -1.22
UBR4-209ENST00000465036 SEPHS1P49903 392 aa7.42□□□□□ -1.22
UBR4-209ENST00000465036 HHIPL2Q6UWX4 724 aa7.42□□□□□ -1.22
UBR4-209ENST00000465036 PCDH18Q9HCL0 1135 aa7.42□□□□□ -1.22
UBR4-209ENST00000465036 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.42□□□□□ -1.22
UBR4-209ENST00000465036 BICRAQ9NZM4 1560 aa7.42□□□□□ -1.22
UBR4-209ENST00000465036 C2orf71A6NGG8 1288 aa7.41□□□□□ -1.22
UBR4-209ENST00000465036 PPP1R11O60927 126 aaPredicted RBP7.41□□□□□ -1.22
UBR4-209ENST00000465036 SLC7A5Q01650 507 aa7.41□□□□□ -1.22
UBR4-209ENST00000465036 LINC00482Q8N8I6 264 aa7.41□□□□□ -1.22
UBR4-209ENST00000465036 RASGRP4Q8TDF6 673 aa7.41□□□□□ -1.22
UBR4-209ENST00000465036 LNPKQ9C0E8 428 aa7.41□□□□□ -1.22
UBR4-209ENST00000465036 NTMQ9P121 344 aa7.41□□□□□ -1.22
UBR4-209ENST00000465036 FBLN5Q9UBX5 448 aa7.41□□□□□ -1.22
UBR4-209ENST00000465036 CGGBP1Q9UFW8 167 aaPredicted RBP7.41□□□□□ -1.22
UBR4-209ENST00000465036 STXBP3O00186 592 aa7.4□□□□□ -1.22
UBR4-209ENST00000465036 PAMP19021 973 aa7.4□□□□□ -1.22
UBR4-209ENST00000465036 EIF6P56537 245 aaKnown RBP7.4□□□□□ -1.22
UBR4-209ENST00000465036 GJA9P57773 515 aa7.4□□□□□ -1.22
UBR4-209ENST00000465036 AMPD2Q01433 879 aa7.4□□□□□ -1.22
UBR4-209ENST00000465036 ZNF654Q8IZM8 581 aa7.4□□□□□ -1.22
UBR4-209ENST00000465036 ADCY4Q8NFM4 1077 aa7.4□□□□□ -1.22
UBR4-209ENST00000465036 SMARCC2Q8TAQ2 1214 aa7.4□□□□□ -1.22
UBR4-209ENST00000465036 GINM1Q9NU53 330 aa7.4□□□□□ -1.22
UBR4-209ENST00000465036 SPATA6Q9NWH7 488 aaPredicted RBP7.4□□□□□ -1.22
UBR4-209ENST00000465036 RWDD3Q9Y3V2 267 aa7.4□□□□□ -1.22
UBR4-209ENST00000465036 SCRIBQ14160 1630 aa7.39□□□□□ -1.23
UBR4-209ENST00000465036 A0A1W2PQH9 124 aa7.39□□□□□ -1.23
UBR4-209ENST00000465036 VAMP4O75379 141 aa7.39□□□□□ -1.23
UBR4-209ENST00000465036 ITGB3P05106 788 aa7.39□□□□□ -1.23
UBR4-209ENST00000465036 EPHX1P07099 455 aa7.39□□□□□ -1.23
UBR4-209ENST00000465036 VAMP1P23763 118 aa7.39□□□□□ -1.23
UBR4-209ENST00000465036 SARSP49591 514 aaKnown RBP7.39□□□□□ -1.23
UBR4-209ENST00000465036 WWC2Q6AWC2 1192 aa7.39□□□□□ -1.23
UBR4-209ENST00000465036 TTLL7Q6ZT98 887 aa7.39□□□□□ -1.23
UBR4-209ENST00000465036 FERMT3Q86UX7 667 aa7.39□□□□□ -1.23
UBR4-209ENST00000465036 PALD1Q9ULE6 856 aa7.39□□□□□ -1.23
UBR4-209ENST00000465036 NPHP3-ACAD11A0A0J9YXS1 232 aa7.38□□□□□ -1.23
UBR4-209ENST00000465036 MAGEA10P43363 369 aaPredicted RBP7.38□□□□□ -1.23
UBR4-209ENST00000465036 PAK2Q13177 524 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms