RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 GPRC5CQ9NQ84 441 aa6.17□□□□□ -1.42
CLK1-208ENST00000464454 CLEC1BQ9P126 229 aa6.17□□□□□ -1.42
CLK1-208ENST00000464454 CDK11AQ9UQ88 783 aaPredicted RBP6.17□□□□□ -1.42
CLK1-208ENST00000464454 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.17□□□□□ -1.42
CLK1-208ENST00000464454 LRRC10BA6NIK2 292 aa6.16□□□□□ -1.42
CLK1-208ENST00000464454 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.16□□□□□ -1.42
CLK1-208ENST00000464454 MEFVO15553 781 aaPredicted RBP6.16□□□□□ -1.42
CLK1-208ENST00000464454 NPHS1O60500 1241 aa6.16□□□□□ -1.42
CLK1-208ENST00000464454 CAPNS1P04632 268 aa6.16□□□□□ -1.42
CLK1-208ENST00000464454 PDE6BP35913 854 aa6.16□□□□□ -1.42
CLK1-208ENST00000464454 LONRF2Q1L5Z9 754 aa6.16□□□□□ -1.42
CLK1-208ENST00000464454 OLFML2BQ68BL8 750 aa6.16□□□□□ -1.42
CLK1-208ENST00000464454 SPATC1Q76KD6 591 aa6.16□□□□□ -1.42
CLK1-208ENST00000464454 FRS2Q8WU20 508 aa6.16□□□□□ -1.42
CLK1-208ENST00000464454 LIN37Q96GY3 246 aaPredicted RBP6.16□□□□□ -1.42
CLK1-208ENST00000464454 IPO9Q96P70 1041 aaKnown RBP6.16□□□□□ -1.42
CLK1-208ENST00000464454 IER2Q9BTL4 223 aa6.16□□□□□ -1.42
CLK1-208ENST00000464454 PDLIM7Q9NR12 457 aa6.16□□□□□ -1.42
CLK1-208ENST00000464454 ARHGEF4Q9NR80 690 aa6.16□□□□□ -1.42
CLK1-208ENST00000464454 PFDN2Q9UHV9 154 aa6.16□□□□□ -1.42
CLK1-208ENST00000464454 OR14I1A6ND48 311 aa6.15□□□□□ -1.42
CLK1-208ENST00000464454 MYO1BO43795 1136 aa6.15□□□□□ -1.42
CLK1-208ENST00000464454 ERVFRD-1P60508 538 aa6.15□□□□□ -1.42
CLK1-208ENST00000464454 TMEM62Q0P6H9 643 aa6.15□□□□□ -1.42
CLK1-208ENST00000464454 TESK1Q15569 626 aa6.15□□□□□ -1.42
CLK1-208ENST00000464454 MLANAQ16655 118 aa6.15□□□□□ -1.42
CLK1-208ENST00000464454 ZC3H12BQ5HYM0 836 aaKnown RBP6.15□□□□□ -1.42
CLK1-208ENST00000464454 ADGRF1Q5T601 910 aa6.15□□□□□ -1.42
CLK1-208ENST00000464454 CABP7Q86V35 215 aa6.15□□□□□ -1.42
CLK1-208ENST00000464454 CPNE8Q86YQ8 564 aa6.15□□□□□ -1.42
CLK1-208ENST00000464454 SIRT2Q8IXJ6 389 aa6.15□□□□□ -1.42
CLK1-208ENST00000464454 PPIL6Q8IXY8 311 aa6.15□□□□□ -1.42
CLK1-208ENST00000464454 TMEM145Q8NBT3 493 aa6.15□□□□□ -1.42
CLK1-208ENST00000464454 DIO2Q92813 273 aa6.15□□□□□ -1.42
CLK1-208ENST00000464454 EPB41L4BQ9H329 900 aa6.15□□□□□ -1.42
CLK1-208ENST00000464454 PIF1Q9H611 641 aa6.15□□□□□ -1.42
CLK1-208ENST00000464454 KDM2BQ8NHM5 1336 aa6.15□□□□□ -1.43
CLK1-208ENST00000464454 FAM221BA6H8Z2 402 aa6.14□□□□□ -1.43
CLK1-208ENST00000464454 HRKO00198 91 aa6.14□□□□□ -1.43
CLK1-208ENST00000464454 ABLIM1O14639 778 aa6.14□□□□□ -1.43
CLK1-208ENST00000464454 PRODHO43272 600 aa6.14□□□□□ -1.43
CLK1-208ENST00000464454 MPOP05164 745 aa6.14□□□□□ -1.43
CLK1-208ENST00000464454 PABPC1P11940 636 aaKnown RBP6.14□□□□□ -1.43
CLK1-208ENST00000464454 GRIA2P42262 883 aa6.14□□□□□ -1.43
CLK1-208ENST00000464454 GTF2A2P52657 109 aa6.14□□□□□ -1.43
CLK1-208ENST00000464454 MVKQ03426 396 aa6.14□□□□□ -1.43
CLK1-208ENST00000464454 SLC35F1Q5T1Q4 408 aa6.14□□□□□ -1.43
CLK1-208ENST00000464454 GIMAP6Q6P9H5 292 aa6.14□□□□□ -1.43
CLK1-208ENST00000464454 NSMFQ6X4W1 530 aa6.14□□□□□ -1.43
CLK1-208ENST00000464454 ZBTB38Q8NAP3 1195 aaPredicted RBP6.14□□□□□ -1.43
CLK1-208ENST00000464454 CDC6Q99741 560 aa6.14□□□□□ -1.43
CLK1-208ENST00000464454 NSUN3Q9H649 340 aaKnown RBP6.14□□□□□ -1.43
CLK1-208ENST00000464454 TNFRSF12AQ9NP84 129 aa6.14□□□□□ -1.43
CLK1-208ENST00000464454 C7orf72A4D263 438 aa6.13□□□□□ -1.43
CLK1-208ENST00000464454 SRGAP3O43295 1099 aa6.13□□□□□ -1.43
CLK1-208ENST00000464454 EFEMP2O95967 443 aa6.13□□□□□ -1.43
CLK1-208ENST00000464454 LTBRP36941 435 aa6.13□□□□□ -1.43
CLK1-208ENST00000464454 CYP4F3Q08477 520 aa6.13□□□□□ -1.43
CLK1-208ENST00000464454 FZD5Q13467 585 aa6.13□□□□□ -1.43
CLK1-208ENST00000464454 NR1I3Q14994 352 aa6.13□□□□□ -1.43
CLK1-208ENST00000464454 SF1Q15637 639 aaKnown RBP6.13□□□□□ -1.43
CLK1-208ENST00000464454 PRSS53Q2L4Q9 553 aa6.13□□□□□ -1.43
CLK1-208ENST00000464454 BICRALQ6AI39 1079 aa6.13□□□□□ -1.43
CLK1-208ENST00000464454 LZTR1Q8N653 840 aa6.13□□□□□ -1.43
CLK1-208ENST00000464454 KREMEN2Q8NCW0 462 aa6.13□□□□□ -1.43
CLK1-208ENST00000464454 C1orf159Q96HA4 380 aa6.13□□□□□ -1.43
CLK1-208ENST00000464454 SLC26A8Q96RN1 970 aa6.13□□□□□ -1.43
CLK1-208ENST00000464454 DIRC2Q96SL1 478 aa6.13□□□□□ -1.43
CLK1-208ENST00000464454 DNAJC7Q99615 494 aa6.13□□□□□ -1.43
CLK1-208ENST00000464454 DCP1AQ9NPI6 582 aaPredicted RBP6.13□□□□□ -1.43
CLK1-208ENST00000464454 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.13□□□□□ -1.43
CLK1-208ENST00000464454 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.13□□□□□ -1.43
CLK1-208ENST00000464454 TLDC2A0PJX2 215 aa6.12□□□□□ -1.43
CLK1-208ENST00000464454 SMARCA5O60264 1052 aaPredicted RBP6.12□□□□□ -1.43
CLK1-208ENST00000464454 ADCY3O60266 1144 aa6.12□□□□□ -1.43
CLK1-208ENST00000464454 DLX3O60479 287 aa6.12□□□□□ -1.43
CLK1-208ENST00000464454 DIAPH1O60610 1272 aaKnown RBP6.12□□□□□ -1.43
CLK1-208ENST00000464454 FARP2O94887 1054 aaPredicted RBP6.12□□□□□ -1.43
CLK1-208ENST00000464454 GALK1P51570 392 aa6.12□□□□□ -1.43
CLK1-208ENST00000464454 RPL11P62913 178 aaKnown RBP6.12□□□□□ -1.43
CLK1-208ENST00000464454 KIR3DS1Q14943 382 aa6.12□□□□□ -1.43
CLK1-208ENST00000464454 RSPO2Q6UXX9 243 aaPredicted RBP6.12□□□□□ -1.43
CLK1-208ENST00000464454 PRR23BQ6ZRT6 265 aa6.12□□□□□ -1.43
CLK1-208ENST00000464454 SCUBE1Q8IWY4 988 aa6.12□□□□□ -1.43
CLK1-208ENST00000464454 FBXO15Q8NCQ5 510 aaPredicted RBP6.12□□□□□ -1.43
CLK1-208ENST00000464454 USP33Q8TEY7 942 aa6.12□□□□□ -1.43
CLK1-208ENST00000464454 THAP3Q8WTV1 239 aaPredicted RBP6.12□□□□□ -1.43
CLK1-208ENST00000464454 TMA7Q9Y2S6 64 aaKnown RBP6.12□□□□□ -1.43
CLK1-208ENST00000464454 TIMM13Q9Y5L4 95 aaPredicted RBP6.12□□□□□ -1.43
CLK1-208ENST00000464454 TRBV23-1A0A0A0MS06 115 aa6.11□□□□□ -1.43
CLK1-208ENST00000464454 PEX10O60683 326 aa6.11□□□□□ -1.43
CLK1-208ENST00000464454 CYBBP04839 570 aa6.11□□□□□ -1.43
CLK1-208ENST00000464454 MSL3P1P0C860 447 aa6.11□□□□□ -1.43
CLK1-208ENST00000464454 SUMO1P63165 101 aaKnown RBP6.11□□□□□ -1.43
CLK1-208ENST00000464454 MBLAC2Q68D91 279 aa6.11□□□□□ -1.43
CLK1-208ENST00000464454 PAQR3Q6TCH7 311 aa6.11□□□□□ -1.43
CLK1-208ENST00000464454 USP53Q70EK8 1073 aa6.11□□□□□ -1.43
CLK1-208ENST00000464454 CCDC103Q8IW40 242 aa6.11□□□□□ -1.43
CLK1-208ENST00000464454 POU5F2Q8N7G0 328 aa6.11□□□□□ -1.43
CLK1-208ENST00000464454 ZSWIM2Q8NEG5 633 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms