RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 TXKP42681 527 aa24.49■■□□□ 1.51
PDLIM2-216ENST00000464275 SEMA3FQ13275 785 aa24.49■■□□□ 1.51
PDLIM2-216ENST00000464275 SYCP1Q15431 976 aa24.49■■□□□ 1.51
PDLIM2-216ENST00000464275 TMC6Q7Z403 805 aa24.49■■□□□ 1.51
PDLIM2-216ENST00000464275 KCND1Q9NSA2 647 aa24.49■■□□□ 1.51
PDLIM2-216ENST00000464275 KBTBD4Q9NVX7 518 aa24.49■■□□□ 1.51
PDLIM2-216ENST00000464275 PGAP2Q9UHJ9 254 aa24.49■■□□□ 1.51
PDLIM2-216ENST00000464275 LTBP3Q9NS15 1303 aa24.48■■□□□ 1.51
PDLIM2-216ENST00000464275 SLC37A4O43826 429 aa24.48■■□□□ 1.51
PDLIM2-216ENST00000464275 CD44P16070 742 aaKnown RBP24.48■■□□□ 1.51
PDLIM2-216ENST00000464275 NBPF9Q3BBW0 867 aa24.48■■□□□ 1.51
PDLIM2-216ENST00000464275 TRMT44Q8IYL2 757 aaKnown RBP24.48■■□□□ 1.51
PDLIM2-216ENST00000464275 MED15Q96RN5 788 aa24.48■■□□□ 1.51
PDLIM2-216ENST00000464275 RAB34Q9BZG1 259 aa24.48■■□□□ 1.51
PDLIM2-216ENST00000464275 SYNRGQ9UMZ2 1314 aa24.48■■□□□ 1.51
PDLIM2-216ENST00000464275 SMCHD1A6NHR9 2005 aa24.47■■□□□ 1.51
PDLIM2-216ENST00000464275 CTIFO43310 598 aaKnown RBP24.47■■□□□ 1.51
PDLIM2-216ENST00000464275 ZNF280AP59817 542 aaPredicted RBP24.47■■□□□ 1.51
PDLIM2-216ENST00000464275 MAP3K10Q02779 954 aa24.47■■□□□ 1.51
PDLIM2-216ENST00000464275 AP3B2Q13367 1082 aa24.47■■□□□ 1.51
PDLIM2-216ENST00000464275 PDIA5Q14554 519 aa24.47■■□□□ 1.51
PDLIM2-216ENST00000464275 ZNF658Q5TYW1 1059 aaPredicted RBP24.47■■□□□ 1.51
PDLIM2-216ENST00000464275 SPATA1Q5VX52 437 aa24.47■■□□□ 1.51
PDLIM2-216ENST00000464275 CALML4Q96GE6 196 aa24.47■■□□□ 1.51
PDLIM2-216ENST00000464275 PLCG1P19174 1290 aa24.47■■□□□ 1.51
PDLIM2-216ENST00000464275 ECE1P42892 770 aa24.47■■□□□ 1.51
PDLIM2-216ENST00000464275 DPF2Q92785 391 aa24.47■■□□□ 1.51
PDLIM2-216ENST00000464275 CDK11BP21127 795 aaKnown RBP24.46■■□□□ 1.51
PDLIM2-216ENST00000464275 CAP2P40123 477 aa24.46■■□□□ 1.51
PDLIM2-216ENST00000464275 KCNB1Q14721 858 aa24.46■■□□□ 1.51
PDLIM2-216ENST00000464275 R3HDM1Q15032 1099 aaKnown RBP24.46■■□□□ 1.51
PDLIM2-216ENST00000464275 ACER1Q8TDN7 264 aa24.46■■□□□ 1.51
PDLIM2-216ENST00000464275 SGIP1Q9BQI5 828 aa24.46■■□□□ 1.51
PDLIM2-216ENST00000464275 LRWD1Q9UFC0 647 aa24.46■■□□□ 1.51
PDLIM2-216ENST00000464275 DDX25Q9UHL0 483 aaKnown RBP24.46■■□□□ 1.51
PDLIM2-216ENST00000464275 BCS1LQ9Y276 419 aa24.46■■□□□ 1.51
PDLIM2-216ENST00000464275 USP17L15C9J2P7 530 aa24.45■■□□□ 1.51
PDLIM2-216ENST00000464275 USP17L13C9JLJ4 530 aa24.45■■□□□ 1.51
PDLIM2-216ENST00000464275 USP17L11C9JVI0 530 aa24.45■■□□□ 1.51
PDLIM2-216ENST00000464275 USP17L18D6R9N7 530 aa24.45■■□□□ 1.51
PDLIM2-216ENST00000464275 USP17L22D6RA61 530 aa24.45■■□□□ 1.51
PDLIM2-216ENST00000464275 USP17L17D6RBQ6 530 aa24.45■■□□□ 1.51
PDLIM2-216ENST00000464275 USP17L19D6RCP7 530 aa24.45■■□□□ 1.51
PDLIM2-216ENST00000464275 USP17L20D6RJB6 530 aa24.45■■□□□ 1.51
PDLIM2-216ENST00000464275 USP17L24Q0WX57 530 aa24.45■■□□□ 1.51
PDLIM2-216ENST00000464275 USP17L6PQ6QN14 398 aa24.45■■□□□ 1.51
PDLIM2-216ENST00000464275 PLIN2Q99541 437 aa24.45■■□□□ 1.51
PDLIM2-216ENST00000464275 MMTAG2Q9BU76 263 aaKnown RBP24.45■■□□□ 1.51
PDLIM2-216ENST00000464275 ANO3Q9BYT9 981 aa24.45■■□□□ 1.51
PDLIM2-216ENST00000464275 SH2D4AQ9H788 454 aa24.45■■□□□ 1.51
PDLIM2-216ENST00000464275 PRR12Q9ULL5 1215 aa24.45■■□□□ 1.51
PDLIM2-216ENST00000464275 RIOK3O14730 519 aaKnown RBP24.45■■□□□ 1.5
PDLIM2-216ENST00000464275 USP11P51784 963 aa24.45■■□□□ 1.5
PDLIM2-216ENST00000464275 STAT2P52630 851 aa24.45■■□□□ 1.5
PDLIM2-216ENST00000464275 TRAF1Q13077 416 aa24.45■■□□□ 1.5
PDLIM2-216ENST00000464275 KLHL10Q6JEL2 608 aa24.45■■□□□ 1.5
PDLIM2-216ENST00000464275 MIGA2Q7L4E1 593 aa24.45■■□□□ 1.5
PDLIM2-216ENST00000464275 CDAN1Q8IWY9 1227 aa24.45■■□□□ 1.5
PDLIM2-216ENST00000464275 CCDC150Q8NCX0 1101 aa24.45■■□□□ 1.5
PDLIM2-216ENST00000464275 SNAP25P60880 206 aa24.44■■□□□ 1.5
PDLIM2-216ENST00000464275 ARID5BQ14865 1188 aa24.44■■□□□ 1.5
PDLIM2-216ENST00000464275 SMYD4Q8IYR2 804 aaPredicted RBP24.44■■□□□ 1.5
PDLIM2-216ENST00000464275 SPICE1Q8N0Z3 855 aa24.44■■□□□ 1.5
PDLIM2-216ENST00000464275 SHTN1A0MZ66 631 aa24.43■■□□□ 1.5
PDLIM2-216ENST00000464275 MEIS2O14770 477 aa24.43■■□□□ 1.5
PDLIM2-216ENST00000464275 TNFAIP1Q13829 316 aa24.43■■□□□ 1.5
PDLIM2-216ENST00000464275 SAMSN1Q9NSI8 373 aaKnown RBP24.43■■□□□ 1.5
PDLIM2-216ENST00000464275 KIF2AO00139 706 aaPredicted RBP24.43■■□□□ 1.5
PDLIM2-216ENST00000464275 MOXD1Q6UVY6 613 aa24.43■■□□□ 1.5
PDLIM2-216ENST00000464275 VSTM4Q8IW00 320 aa24.43■■□□□ 1.5
PDLIM2-216ENST00000464275 LRRC15Q8TF66 581 aa24.43■■□□□ 1.5
PDLIM2-216ENST00000464275 VCPKMTQ9H867 229 aa24.43■■□□□ 1.5
PDLIM2-216ENST00000464275 CTNND2Q9UQB3 1225 aa24.43■■□□□ 1.5
PDLIM2-216ENST00000464275 KLRC4O43908 158 aa24.42■■□□□ 1.5
PDLIM2-216ENST00000464275 FOSP01100 380 aaPredicted RBP24.42■■□□□ 1.5
PDLIM2-216ENST00000464275 TNNT1P13805 278 aa24.42■■□□□ 1.5
PDLIM2-216ENST00000464275 PRKCSHP14314 528 aaPredicted RBP24.42■■□□□ 1.5
PDLIM2-216ENST00000464275 STX17P56962 302 aa24.42■■□□□ 1.5
PDLIM2-216ENST00000464275 AMPD3Q01432 767 aa24.42■■□□□ 1.5
PDLIM2-216ENST00000464275 TPD52L1Q16890 204 aaPredicted RBP24.42■■□□□ 1.5
PDLIM2-216ENST00000464275 USH1GQ495M9 461 aa24.42■■□□□ 1.5
PDLIM2-216ENST00000464275 KIAA1755Q5JYT7 1200 aa24.42■■□□□ 1.5
PDLIM2-216ENST00000464275 TEX2Q8IWB9 1127 aa24.42■■□□□ 1.5
PDLIM2-216ENST00000464275 STK17AQ9UEE5 414 aa24.42■■□□□ 1.5
PDLIM2-216ENST00000464275 RWDD2AQ9UIY3 292 aa24.42■■□□□ 1.5
PDLIM2-216ENST00000464275 DICER1Q9UPY3 1922 aaKnown RBP24.42■■□□□ 1.5
PDLIM2-216ENST00000464275 CYP3A7-CYP3A51PA0A087WV96 503 aa24.42■■□□□ 1.5
PDLIM2-216ENST00000464275 PLA2G6O60733 806 aa24.42■■□□□ 1.5
PDLIM2-216ENST00000464275 ASNSP08243 561 aa24.42■■□□□ 1.5
PDLIM2-216ENST00000464275 CYP3A7P24462 503 aa24.42■■□□□ 1.5
PDLIM2-216ENST00000464275 KCNJ6P48051 423 aa24.42■■□□□ 1.5
PDLIM2-216ENST00000464275 RASA3Q14644 834 aa24.42■■□□□ 1.5
PDLIM2-216ENST00000464275 KMT5BQ4FZB7 885 aa24.42■■□□□ 1.5
PDLIM2-216ENST00000464275 FAM83BQ5T0W9 1011 aa24.42■■□□□ 1.5
PDLIM2-216ENST00000464275 CHURC1Q8WUH1 139 aa24.42■■□□□ 1.5
PDLIM2-216ENST00000464275 CCDC47Q96A33 483 aaKnown RBP24.42■■□□□ 1.5
PDLIM2-216ENST00000464275 MBOAT7Q96N66 472 aa24.42■■□□□ 1.5
PDLIM2-216ENST00000464275 C7orf25Q9BPX7 421 aa24.42■■□□□ 1.5
PDLIM2-216ENST00000464275 CCDC94Q9BW85 323 aaPredicted RBP24.42■■□□□ 1.5
PDLIM2-216ENST00000464275 NRDCO43847 1150 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms