RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 SLC51AQ86UW1 340 aa9.73□□□□□ -0.85
SHQ1-203ENST00000463369 IGSF22Q8N9C0 903 aa9.73□□□□□ -0.85
SHQ1-203ENST00000463369 PRPF38AQ8NAV1 312 aaKnown RBP9.73□□□□□ -0.85
SHQ1-203ENST00000463369 BOLA2Q9H3K6 86 aa9.73□□□□□ -0.85
SHQ1-203ENST00000463369 RNF19AQ9NV58 838 aa9.73□□□□□ -0.85
SHQ1-203ENST00000463369 ADGRG1Q9Y653 693 aa9.73□□□□□ -0.85
SHQ1-203ENST00000463369 ZNF804BA4D1E1 1349 aa9.73□□□□□ -0.85
SHQ1-203ENST00000463369 DUOX1Q9NRD9 1551 aa9.72□□□□□ -0.85
SHQ1-203ENST00000463369 LZTS3O60299 673 aaPredicted RBP9.72□□□□□ -0.85
SHQ1-203ENST00000463369 CYP21A2P08686 494 aa9.72□□□□□ -0.85
SHQ1-203ENST00000463369 ATP2B4P23634 1241 aa9.72□□□□□ -0.85
SHQ1-203ENST00000463369 INPP5BP32019 993 aa9.72□□□□□ -0.85
SHQ1-203ENST00000463369 IRAK1P51617 712 aa9.72□□□□□ -0.85
SHQ1-203ENST00000463369 CCT2P78371 535 aaKnown RBP9.72□□□□□ -0.85
SHQ1-203ENST00000463369 ZNF569Q5MCW4 686 aa9.72□□□□□ -0.85
SHQ1-203ENST00000463369 TTC39AQ5SRH9 613 aa9.72□□□□□ -0.85
SHQ1-203ENST00000463369 CCDC102BQ68D86 513 aa9.72□□□□□ -0.85
SHQ1-203ENST00000463369 C15orf52Q6ZUT6 534 aaKnown RBP9.72□□□□□ -0.85
SHQ1-203ENST00000463369 DHX32Q7L7V1 743 aaKnown RBP9.72□□□□□ -0.85
SHQ1-203ENST00000463369 C7orf43Q8WVR3 580 aa9.72□□□□□ -0.85
SHQ1-203ENST00000463369 PANX2Q96RD6 677 aa9.72□□□□□ -0.85
SHQ1-203ENST00000463369 HAUS7Q99871 368 aa9.72□□□□□ -0.85
SHQ1-203ENST00000463369 NUB1Q9Y5A7 615 aa9.72□□□□□ -0.85
SHQ1-203ENST00000463369 IRS2Q9Y4H2 1338 aa9.72□□□□□ -0.85
SHQ1-203ENST00000463369 GBP6Q6ZN66 633 aa9.71□□□□□ -0.85
SHQ1-203ENST00000463369 TTLL6Q8N841 843 aa9.71□□□□□ -0.85
SHQ1-203ENST00000463369 RNF34Q969K3 372 aa9.71□□□□□ -0.85
SHQ1-203ENST00000463369 AGXT2Q9BYV1 514 aa9.71□□□□□ -0.85
SHQ1-203ENST00000463369 HPCAL4Q9UM19 191 aa9.71□□□□□ -0.85
SHQ1-203ENST00000463369 POLR3DP05423 398 aaPredicted RBP9.71□□□□□ -0.86
SHQ1-203ENST00000463369 UQCRFS1P1P0C7P4 283 aa9.71□□□□□ -0.86
SHQ1-203ENST00000463369 FDPSP14324 419 aaKnown RBP9.71□□□□□ -0.86
SHQ1-203ENST00000463369 SYKP43405 635 aa9.71□□□□□ -0.86
SHQ1-203ENST00000463369 PHKA1P46020 1223 aa9.71□□□□□ -0.86
SHQ1-203ENST00000463369 EXOSC10Q01780 885 aaKnown RBP9.71□□□□□ -0.86
SHQ1-203ENST00000463369 TBC1D16Q8TBP0 767 aa9.71□□□□□ -0.86
SHQ1-203ENST00000463369 CABS1Q96KC9 395 aa9.71□□□□□ -0.86
SHQ1-203ENST00000463369 FAM84BQ96KN1 310 aaPredicted RBP9.71□□□□□ -0.86
SHQ1-203ENST00000463369 JPH2Q9BR39 696 aaPredicted RBP9.71□□□□□ -0.86
SHQ1-203ENST00000463369 NAA15Q9BXJ9 866 aaKnown RBP9.71□□□□□ -0.86
SHQ1-203ENST00000463369 KAT14Q9H8E8 782 aa9.71□□□□□ -0.86
SHQ1-203ENST00000463369 NCOA5Q9HCD5 579 aaKnown RBP9.71□□□□□ -0.86
SHQ1-203ENST00000463369 AVENQ9NQS1 362 aaPredicted RBP9.71□□□□□ -0.86
SHQ1-203ENST00000463369 GGA1Q9UJY5 639 aa9.71□□□□□ -0.86
SHQ1-203ENST00000463369 DICER1Q9UPY3 1922 aaKnown RBP9.71□□□□□ -0.86
SHQ1-203ENST00000463369 ZNF646O15015 1829 aaPredicted RBP9.71□□□□□ -0.86
SHQ1-203ENST00000463369 SNED1Q8TER0 1413 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 MYH2Q9UKX2 1941 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 A0A0U1RQJ8 604 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 AKR1B15C9JRZ8 316 aaPredicted RBP9.7□□□□□ -0.86
SHQ1-203ENST00000463369 UFL1O94874 794 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 P4HBP07237 508 aaKnown RBP9.7□□□□□ -0.86
SHQ1-203ENST00000463369 LDHCP07864 332 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 MCM3P25205 808 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 PDIA3P30101 505 aaKnown RBP9.7□□□□□ -0.86
SHQ1-203ENST00000463369 GYG1P46976 350 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 BCAMP50895 628 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 PNOCQ13519 176 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 PUS10Q3MIT2 529 aaKnown RBP9.7□□□□□ -0.86
SHQ1-203ENST00000463369 CAVIN4Q5BKX8 364 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 RAD9BQ6WBX8 426 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 STOX1Q6ZVD7 989 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 RASGRP2Q7LDG7 609 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 MCF2L2Q86YR7 1114 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 NOA1Q8NC60 698 aaKnown RBP9.7□□□□□ -0.86
SHQ1-203ENST00000463369 FAM76AQ8TAV0 307 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 ATRIPQ8WXE1 791 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 ZNF274Q96GC6 653 aaPredicted RBP9.7□□□□□ -0.86
SHQ1-203ENST00000463369 PIM2Q9P1W9 311 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 POLLQ9UGP5 575 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 HPSEQ9Y251 543 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 SBF1O95248 1867 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 SCN9AQ15858 1988 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 IFRD1O00458 451 aaPredicted RBP9.7□□□□□ -0.86
SHQ1-203ENST00000463369 PPP1R12AO14974 1030 aaPredicted RBP9.7□□□□□ -0.86
SHQ1-203ENST00000463369 PPFIA3O75145 1194 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 TFRCP02786 760 aaKnown RBP9.7□□□□□ -0.86
SHQ1-203ENST00000463369 ZNF18P17022 549 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 SCP2P22307 547 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 KLRK1P26718 216 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 MCAMP43121 646 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 FNTAP49354 379 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 RASSF7Q02833 373 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 ARID5AQ03989 594 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 POU5F1BQ06416 359 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 STIM1Q13586 685 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 SCARF1Q14162 830 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 NR1I3Q14994 352 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 CRTC2Q53ET0 693 aaPredicted RBP9.7□□□□□ -0.86
SHQ1-203ENST00000463369 ANO1Q5XXA6 986 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 SYNE3Q6ZMZ3 975 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 BRAPQ7Z569 592 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 TXNRD3Q86VQ6 643 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 SLC35F6Q8N357 371 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 CCDC148Q8NFR7 591 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 GIMAP7Q8NHV1 300 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 COG1Q8WTW3 980 aa9.7□□□□□ -0.86
SHQ1-203ENST00000463369 RNPC3Q96LT9 517 aaKnown RBP9.7□□□□□ -0.86
SHQ1-203ENST00000463369 NAPGQ99747 312 aaPredicted RBP9.7□□□□□ -0.86
SHQ1-203ENST00000463369 CASS4Q9NQ75 786 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms