RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 CHURC1-FNTBB4DL54 471 aa4.43□□□□□ -1.7
NDUFA4-202ENST00000463308 GPR42O15529 346 aa4.43□□□□□ -1.7
NDUFA4-202ENST00000463308 RPL13P26373 211 aaKnown RBP4.43□□□□□ -1.7
NDUFA4-202ENST00000463308 FAM160A1Q05DH4 1040 aa4.43□□□□□ -1.7
NDUFA4-202ENST00000463308 LRRFIP1Q32MZ4 808 aaKnown RBP4.43□□□□□ -1.7
NDUFA4-202ENST00000463308 ARSHQ5FYA8 562 aa4.43□□□□□ -1.7
NDUFA4-202ENST00000463308 NBPF12Q5TAG4 269 aaPredicted RBP4.43□□□□□ -1.7
NDUFA4-202ENST00000463308 CWF19L1Q69YN2 538 aaKnown RBP4.43□□□□□ -1.7
NDUFA4-202ENST00000463308 LINC00482Q8N8I6 264 aa4.43□□□□□ -1.7
NDUFA4-202ENST00000463308 SMARCC2Q8TAQ2 1214 aa4.43□□□□□ -1.7
NDUFA4-202ENST00000463308 CPA5Q8WXQ8 436 aa4.43□□□□□ -1.7
NDUFA4-202ENST00000463308 NOX5Q96PH1 765 aa4.43□□□□□ -1.7
NDUFA4-202ENST00000463308 CDADC1Q9BWV3 514 aa4.43□□□□□ -1.7
NDUFA4-202ENST00000463308 DBR1Q9UK59 544 aaKnown RBP4.43□□□□□ -1.7
NDUFA4-202ENST00000463308 PCDHB12Q9Y5F1 795 aa4.43□□□□□ -1.7
NDUFA4-202ENST00000463308 MINDY4BA8MYZ0 360 aa4.42□□□□□ -1.7
NDUFA4-202ENST00000463308 PATE3B3GLJ2 98 aa4.42□□□□□ -1.7
NDUFA4-202ENST00000463308 F8W031 263 aaPredicted RBP4.42□□□□□ -1.7
NDUFA4-202ENST00000463308 SIGLEC6O43699 453 aa4.42□□□□□ -1.7
NDUFA4-202ENST00000463308 PDIA4P13667 645 aaKnown RBP4.42□□□□□ -1.7
NDUFA4-202ENST00000463308 IL12RB1P42701 662 aa4.42□□□□□ -1.7
NDUFA4-202ENST00000463308 BICRALQ6AI39 1079 aa4.42□□□□□ -1.7
NDUFA4-202ENST00000463308 FAM196AQ6ZSG2 479 aa4.42□□□□□ -1.7
NDUFA4-202ENST00000463308 JAMLQ86YT9 394 aa4.42□□□□□ -1.7
NDUFA4-202ENST00000463308 USP33Q8TEY7 942 aa4.42□□□□□ -1.7
NDUFA4-202ENST00000463308 ZNF503Q96F45 646 aa4.42□□□□□ -1.7
NDUFA4-202ENST00000463308 RHOVQ96L33 236 aa4.42□□□□□ -1.7
NDUFA4-202ENST00000463308 JMJD8Q96S16 334 aa4.42□□□□□ -1.7
NDUFA4-202ENST00000463308 DSCC1Q9BVC3 393 aa4.42□□□□□ -1.7
NDUFA4-202ENST00000463308 FBXL21Q9UKT6 434 aa4.42□□□□□ -1.7
NDUFA4-202ENST00000463308 F6X3S4 739 aa4.41□□□□□ -1.7
NDUFA4-202ENST00000463308 ITGB6P18564 788 aa4.41□□□□□ -1.7
NDUFA4-202ENST00000463308 CEBPAP49715 358 aaPredicted RBP4.41□□□□□ -1.7
NDUFA4-202ENST00000463308 IGDCC4Q8TDY8 1250 aa4.41□□□□□ -1.7
NDUFA4-202ENST00000463308 LCORQ96JN0 433 aaPredicted RBP4.41□□□□□ -1.7
NDUFA4-202ENST00000463308 DHRS1Q96LJ7 313 aa4.41□□□□□ -1.7
NDUFA4-202ENST00000463308 WWC2-AS2Q96NR7 200 aa4.41□□□□□ -1.7
NDUFA4-202ENST00000463308 PCDH18Q9HCL0 1135 aa4.41□□□□□ -1.7
NDUFA4-202ENST00000463308 CHST7Q9NS84 486 aa4.41□□□□□ -1.7
NDUFA4-202ENST00000463308 PCDHB14Q9Y5E9 798 aa4.41□□□□□ -1.7
NDUFA4-202ENST00000463308 TLR3O15455 904 aaKnown RBP4.4□□□□□ -1.71
NDUFA4-202ENST00000463308 PRAMEF1O95521 474 aa4.4□□□□□ -1.71
NDUFA4-202ENST00000463308 PMLP29590 882 aa4.4□□□□□ -1.71
NDUFA4-202ENST00000463308 MCM4P33991 863 aa4.4□□□□□ -1.71
NDUFA4-202ENST00000463308 ZNF165P49910 485 aa4.4□□□□□ -1.71
NDUFA4-202ENST00000463308 NBPF9Q3BBW0 867 aa4.4□□□□□ -1.71
NDUFA4-202ENST00000463308 HS2ST1Q7LGA3 356 aa4.4□□□□□ -1.71
NDUFA4-202ENST00000463308 NLRC3Q7RTR2 1065 aa4.4□□□□□ -1.71
NDUFA4-202ENST00000463308 TMC3Q7Z5M5 1100 aa4.4□□□□□ -1.71
NDUFA4-202ENST00000463308 LRRC3Q9BY71 257 aa4.4□□□□□ -1.71
NDUFA4-202ENST00000463308 ANTXR1Q9H6X2 564 aa4.4□□□□□ -1.71
NDUFA4-202ENST00000463308 PRR13Q9NZ81 148 aa4.4□□□□□ -1.71
NDUFA4-202ENST00000463308 POLR3KQ9Y2Y1 108 aaPredicted RBP4.4□□□□□ -1.71
NDUFA4-202ENST00000463308 C9orf118A6NHY6 69 aa4.39□□□□□ -1.71
NDUFA4-202ENST00000463308 NARSO43776 548 aaKnown RBP4.39□□□□□ -1.71
NDUFA4-202ENST00000463308 B4GALT3O60512 393 aa4.39□□□□□ -1.71
NDUFA4-202ENST00000463308 ZNF623O75123 536 aa4.39□□□□□ -1.71
NDUFA4-202ENST00000463308 FBLP22087 321 aaKnown RBP4.39□□□□□ -1.71
NDUFA4-202ENST00000463308 BMP8BP34820 402 aa4.39□□□□□ -1.71
NDUFA4-202ENST00000463308 EIF4A3P38919 411 aaKnown RBP4.39□□□□□ -1.71
NDUFA4-202ENST00000463308 EPHB4P54760 987 aa4.39□□□□□ -1.71
NDUFA4-202ENST00000463308 CACNB2Q08289 660 aaPredicted RBP4.39□□□□□ -1.71
NDUFA4-202ENST00000463308 APOBRQ0VD83 1088 aa4.39□□□□□ -1.71
NDUFA4-202ENST00000463308 HLA-DQA1Q5Y7H0 255 aa4.39□□□□□ -1.71
NDUFA4-202ENST00000463308 OVOS1Q6IE37 1185 aa4.39□□□□□ -1.71
NDUFA4-202ENST00000463308 CYP2R1Q6VVX0 501 aa4.39□□□□□ -1.71
NDUFA4-202ENST00000463308 RNF207Q6ZRF8 634 aa4.39□□□□□ -1.71
NDUFA4-202ENST00000463308 CABP7Q86V35 215 aa4.39□□□□□ -1.71
NDUFA4-202ENST00000463308 TSPAN17Q96FV3 270 aa4.39□□□□□ -1.71
NDUFA4-202ENST00000463308 PDLIM7Q9NR12 457 aa4.39□□□□□ -1.71
NDUFA4-202ENST00000463308 MEIS1O00470 390 aa4.38□□□□□ -1.71
NDUFA4-202ENST00000463308 ZNF205O95201 554 aa4.38□□□□□ -1.71
NDUFA4-202ENST00000463308 ATE1O95260 518 aa4.38□□□□□ -1.71
NDUFA4-202ENST00000463308 GSNP06396 782 aa4.38□□□□□ -1.71
NDUFA4-202ENST00000463308 THBS2P35442 1172 aa4.38□□□□□ -1.71
NDUFA4-202ENST00000463308 NOP2P46087 812 aaKnown RBP4.38□□□□□ -1.71
NDUFA4-202ENST00000463308 CORO7P57737 925 aa4.38□□□□□ -1.71
NDUFA4-202ENST00000463308 SMAD4Q13485 552 aaKnown RBP4.38□□□□□ -1.71
NDUFA4-202ENST00000463308 CCDC142Q17RM4 750 aa4.38□□□□□ -1.71
NDUFA4-202ENST00000463308 HS1BP3Q53T59 392 aa4.38□□□□□ -1.71
NDUFA4-202ENST00000463308 ZNF326Q5BKZ1 582 aaKnown RBP4.38□□□□□ -1.71
NDUFA4-202ENST00000463308 C9orf131Q5VYM1 1079 aa4.38□□□□□ -1.71
NDUFA4-202ENST00000463308 MCTP2Q6DN12 878 aa4.38□□□□□ -1.71
NDUFA4-202ENST00000463308 DNAJC14Q6Y2X3 702 aaPredicted RBP4.38□□□□□ -1.71
NDUFA4-202ENST00000463308 GLCCI1Q86VQ1 547 aa4.38□□□□□ -1.71
NDUFA4-202ENST00000463308 REXO1Q8N1G1 1221 aaKnown RBP4.38□□□□□ -1.71
NDUFA4-202ENST00000463308 TXNDC5Q8NBS9 432 aaKnown RBP4.38□□□□□ -1.71
NDUFA4-202ENST00000463308 RNF34Q969K3 372 aa4.38□□□□□ -1.71
NDUFA4-202ENST00000463308 FAM161BQ96MY7 647 aa4.38□□□□□ -1.71
NDUFA4-202ENST00000463308 BRMS1Q9HCU9 246 aa4.38□□□□□ -1.71
NDUFA4-202ENST00000463308 KBTBD4Q9NVX7 518 aa4.38□□□□□ -1.71
NDUFA4-202ENST00000463308 UBOX5O94941 541 aa4.37□□□□□ -1.71
NDUFA4-202ENST00000463308 CTSHP09668 335 aa4.37□□□□□ -1.71
NDUFA4-202ENST00000463308 ACRP10323 421 aa4.37□□□□□ -1.71
NDUFA4-202ENST00000463308 IMPDH2P12268 514 aa4.37□□□□□ -1.71
NDUFA4-202ENST00000463308 TAGLNQ01995 201 aaKnown RBP4.37□□□□□ -1.71
NDUFA4-202ENST00000463308 TRIM26Q12899 539 aaPredicted RBP4.37□□□□□ -1.71
NDUFA4-202ENST00000463308 PRKD1Q15139 912 aaPredicted RBP4.37□□□□□ -1.71
NDUFA4-202ENST00000463308 NOL9Q5SY16 702 aaKnown RBP4.37□□□□□ -1.71
NDUFA4-202ENST00000463308 SLFN13Q68D06 897 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms