RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 SULT6B1Q6IMI4 303 aa9.47□□□□□ -0.89
UBE4B-204ENST00000462658 SHDQ96IW2 340 aa9.47□□□□□ -0.89
UBE4B-204ENST00000462658 CRBNQ96SW2 442 aa9.47□□□□□ -0.89
UBE4B-204ENST00000462658 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.47□□□□□ -0.895e-7■■■□□ 18.9
UBE4B-204ENST00000462658 CEP131Q9UPN4 1083 aa9.47□□□□□ -0.89
UBE4B-204ENST00000462658 MRVI1Q9Y6F6 885 aa9.47□□□□□ -0.89
UBE4B-204ENST00000462658 UBOX5O94941 541 aa9.46□□□□□ -0.9
UBE4B-204ENST00000462658 FGRP09769 529 aa9.46□□□□□ -0.9
UBE4B-204ENST00000462658 ACRP10323 421 aa9.46□□□□□ -0.9
UBE4B-204ENST00000462658 GBP1P32455 592 aa9.46□□□□□ -0.9
UBE4B-204ENST00000462658 MCF2L2Q86YR7 1114 aa9.46□□□□□ -0.9
UBE4B-204ENST00000462658 RBBP8NLQ8NC74 664 aaPredicted RBP9.46□□□□□ -0.9
UBE4B-204ENST00000462658 LRRC59Q96AG4 307 aaKnown RBP9.46□□□□□ -0.9
UBE4B-204ENST00000462658 ANAPC16Q96DE5 110 aa9.46□□□□□ -0.9
UBE4B-204ENST00000462658 LTV1Q96GA3 475 aaPredicted RBP9.46□□□□□ -0.9
UBE4B-204ENST00000462658 PHACTR3Q96KR7 559 aa9.46□□□□□ -0.9
UBE4B-204ENST00000462658 C8orf37Q96NL8 207 aa9.46□□□□□ -0.9
UBE4B-204ENST00000462658 SLC9A7Q96T83 725 aa9.46□□□□□ -0.9
UBE4B-204ENST00000462658 PRDM5Q9NQX1 630 aaPredicted RBP9.46□□□□□ -0.9
UBE4B-204ENST00000462658 PRR33A8MZF0 331 aa9.45□□□□□ -0.9
UBE4B-204ENST00000462658 RGS13O14921 159 aa9.45□□□□□ -0.9
UBE4B-204ENST00000462658 GIPRP48546 466 aa9.45□□□□□ -0.9
UBE4B-204ENST00000462658 RIPK4P57078 832 aa9.45□□□□□ -0.9
UBE4B-204ENST00000462658 SLFN5Q08AF3 891 aa9.45□□□□□ -0.9
UBE4B-204ENST00000462658 WDR63Q8IWG1 891 aa9.45□□□□□ -0.9
UBE4B-204ENST00000462658 GTF2IRD1Q9UHL9 959 aa9.45□□□□□ -0.9
UBE4B-204ENST00000462658 RNF112Q9ULX5 631 aa9.45□□□□□ -0.9
UBE4B-204ENST00000462658 MED26O95402 600 aa9.44□□□□□ -0.9
UBE4B-204ENST00000462658 SSBP05455 408 aaKnown RBP eCLIP9.44□□□□□ -0.9
UBE4B-204ENST00000462658 FOSL1P15407 271 aa9.44□□□□□ -0.9
UBE4B-204ENST00000462658 ITIH2P19823 946 aa9.44□□□□□ -0.9
UBE4B-204ENST00000462658 OXCT1P55809 520 aa9.44□□□□□ -0.9
UBE4B-204ENST00000462658 NFE2L2Q16236 605 aa9.44□□□□□ -0.9
UBE4B-204ENST00000462658 CPSF6Q16630 551 aaKnown RBP eCLIP9.44□□□□□ -0.9
UBE4B-204ENST00000462658 FAM169BQ8N8A8 192 aa9.44□□□□□ -0.9
UBE4B-204ENST00000462658 ZC3H7BQ9UGR2 993 aaKnown RBP9.44□□□□□ -0.9
UBE4B-204ENST00000462658 IGSF1Q8N6C5 1336 aa9.44□□□□□ -0.9
UBE4B-204ENST00000462658 BCL9LQ86UU0 1499 aa9.44□□□□□ -0.9
UBE4B-204ENST00000462658 NRAPQ86VF7 1730 aa9.44□□□□□ -0.9
UBE4B-204ENST00000462658 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.43□□□□□ -0.9
UBE4B-204ENST00000462658 PLCH1Q4KWH8 1693 aa9.43□□□□□ -0.9
UBE4B-204ENST00000462658 PHRF1Q9P1Y6 1649 aaKnown RBP9.43□□□□□ -0.9
UBE4B-204ENST00000462658 AFF2P51816 1311 aa9.43□□□□□ -0.9
UBE4B-204ENST00000462658 TNFRSF10CO14798 259 aa9.43□□□□□ -0.9
UBE4B-204ENST00000462658 CBX7O95931 251 aa9.43□□□□□ -0.9
UBE4B-204ENST00000462658 SSTR4P31391 388 aa9.43□□□□□ -0.9
UBE4B-204ENST00000462658 ZYXQ15942 572 aaKnown RBP9.43□□□□□ -0.9
UBE4B-204ENST00000462658 SFRP5Q5T4F7 317 aa9.43□□□□□ -0.9
UBE4B-204ENST00000462658 ARHGAP27Q6ZUM4 889 aa9.43□□□□□ -0.9
UBE4B-204ENST00000462658 TRMT2AQ8IZ69 625 aaKnown RBP9.43□□□□□ -0.9
UBE4B-204ENST00000462658 PLD6Q8N2A8 252 aaKnown RBP9.43□□□□□ -0.9
UBE4B-204ENST00000462658 GMLQ99445 158 aa9.43□□□□□ -0.9
UBE4B-204ENST00000462658 STRIP2Q9ULQ0 834 aa9.43□□□□□ -0.9
UBE4B-204ENST00000462658 GLI3P10071 1580 aa9.42□□□□□ -0.9
UBE4B-204ENST00000462658 SLIT2O94813 1529 aa9.42□□□□□ -0.9
UBE4B-204ENST00000462658 ETV3P41162 512 aa9.42□□□□□ -0.9
UBE4B-204ENST00000462658 NBPF6Q5VWK0 638 aa9.42□□□□□ -0.9
UBE4B-204ENST00000462658 NBPF4Q96M43 638 aa9.42□□□□□ -0.9
UBE4B-204ENST00000462658 KREMEN1Q96MU8 473 aa9.42□□□□□ -0.9
UBE4B-204ENST00000462658 TM9SF2Q99805 663 aa9.42□□□□□ -0.9
UBE4B-204ENST00000462658 MAPK8IP1Q9UQF2 711 aa9.42□□□□□ -0.9
UBE4B-204ENST00000462658 RGS12O14924 1447 aa9.41□□□□□ -0.9
UBE4B-204ENST00000462658 ATRNO75882 1429 aa9.41□□□□□ -0.9
UBE4B-204ENST00000462658 CPDO75976 1380 aa9.41□□□□□ -0.9
UBE4B-204ENST00000462658 KDRP35968 1356 aa9.41□□□□□ -0.9
UBE4B-204ENST00000462658 IGF2BP3O00425 579 aaKnown RBP eCLIP9.41□□□□□ -0.9
UBE4B-204ENST00000462658 LRRN2O75325 713 aa9.41□□□□□ -0.9
UBE4B-204ENST00000462658 GUCY2CP25092 1073 aa9.41□□□□□ -0.9
UBE4B-204ENST00000462658 ETFBP38117 255 aa9.41□□□□□ -0.9
UBE4B-204ENST00000462658 CHRNA2Q15822 529 aa9.41□□□□□ -0.9
UBE4B-204ENST00000462658 ZMYM1Q5SVZ6 1142 aa9.41□□□□□ -0.9
UBE4B-204ENST00000462658 ZNF746Q6NUN9 644 aaPredicted RBP9.41□□□□□ -0.9
UBE4B-204ENST00000462658 TMEM192Q8IY95 271 aa9.41□□□□□ -0.9
UBE4B-204ENST00000462658 USHBP1Q8N6Y0 703 aa9.41□□□□□ -0.9
UBE4B-204ENST00000462658 ZNF512BQ96KM6 892 aaPredicted RBP9.41□□□□□ -0.9
UBE4B-204ENST00000462658 PLAGL2Q9UPG8 496 aa9.41□□□□□ -0.9
UBE4B-204ENST00000462658 LTN1O94822 1766 aa9.41□□□□□ -0.9
UBE4B-204ENST00000462658 KIAA0232Q92628 1395 aa9.4□□□□□ -0.9
UBE4B-204ENST00000462658 RGPD1P0DJD0 1748 aa9.4□□□□□ -0.9
UBE4B-204ENST00000462658 IL16Q14005 1332 aa9.4□□□□□ -0.9
UBE4B-204ENST00000462658 COBLO75128 1261 aa9.4□□□□□ -0.9
UBE4B-204ENST00000462658 CYP7A1P22680 504 aa9.4□□□□□ -0.9
UBE4B-204ENST00000462658 GRIK1P39086 918 aa9.4□□□□□ -0.9
UBE4B-204ENST00000462658 CHMP4BP1P59074 171 aa9.4□□□□□ -0.9
UBE4B-204ENST00000462658 LMOD3Q0VAK6 560 aa9.4□□□□□ -0.9
UBE4B-204ENST00000462658 PPP2R5EQ16537 467 aa9.4□□□□□ -0.9
UBE4B-204ENST00000462658 INTS3Q68E01 1043 aaKnown RBP9.4□□□□□ -0.9
UBE4B-204ENST00000462658 UNC5AQ6ZN44 842 aa9.4□□□□□ -0.9
UBE4B-204ENST00000462658 SLC6A18Q96N87 628 aa9.4□□□□□ -0.9
UBE4B-204ENST00000462658 TANGO6Q9C0B7 1094 aa9.4□□□□□ -0.9
UBE4B-204ENST00000462658 MYH16Q9H6N6 1097 aa9.4□□□□□ -0.9
UBE4B-204ENST00000462658 PRDM11Q9NQV5 511 aa9.4□□□□□ -0.9
UBE4B-204ENST00000462658 RCAN3Q9UKA8 241 aa9.4□□□□□ -0.9
UBE4B-204ENST00000462658 EP400Q96L91 3159 aa9.4□□□□□ -0.91
UBE4B-204ENST00000462658 GNAT3A8MTJ3 354 aa9.39□□□□□ -0.91
UBE4B-204ENST00000462658 CEACAM5P06731 702 aa9.39□□□□□ -0.91
UBE4B-204ENST00000462658 CALD1Q05682 793 aaKnown RBP9.39□□□□□ -0.91
UBE4B-204ENST00000462658 MSMPQ1L6U9 139 aa9.39□□□□□ -0.91
UBE4B-204ENST00000462658 MTHFSDQ2M296 383 aaKnown RBP9.39□□□□□ -0.91
UBE4B-204ENST00000462658 TTC6Q86TZ1 520 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms