RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 ADD3Q9UEY8 706 aaKnown RBP10.75□□□□□ -0.69
BRCA1-207ENST00000461798 MTMR7Q9Y216 660 aa10.75□□□□□ -0.69
BRCA1-207ENST00000461798 GNEQ9Y223 722 aaKnown RBP10.75□□□□□ -0.69
BRCA1-207ENST00000461798 Q9Y3F1 56 aa10.75□□□□□ -0.69
BRCA1-207ENST00000461798 FRMPD2Q68DX3 1309 aaPredicted RBP10.75□□□□□ -0.69
BRCA1-207ENST00000461798 MYADML2A6NDP7 307 aa10.74□□□□□ -0.69
BRCA1-207ENST00000461798 CLTBP09497 229 aa10.74□□□□□ -0.69
BRCA1-207ENST00000461798 C6orf222P0C671 652 aaPredicted RBP10.74□□□□□ -0.69
BRCA1-207ENST00000461798 BAATQ14032 418 aaPredicted RBP10.74□□□□□ -0.69
BRCA1-207ENST00000461798 GNASQ5JWF2 1037 aa10.74□□□□□ -0.69
BRCA1-207ENST00000461798 TAPT1Q6NXT6 567 aa10.74□□□□□ -0.69
BRCA1-207ENST00000461798 NSMFQ6X4W1 530 aa10.74□□□□□ -0.69
BRCA1-207ENST00000461798 SH3RF1Q7Z6J0 888 aa10.74□□□□□ -0.69
BRCA1-207ENST00000461798 BADQ92934 168 aa10.74□□□□□ -0.69
BRCA1-207ENST00000461798 GLT1D1Q96MS3 346 aa10.74□□□□□ -0.69
BRCA1-207ENST00000461798 ZKSCAN3Q9BRR0 538 aa10.74□□□□□ -0.69
BRCA1-207ENST00000461798 IL25Q9H293 177 aa10.74□□□□□ -0.69
BRCA1-207ENST00000461798 CNNM2Q9H8M5 875 aa10.74□□□□□ -0.69
BRCA1-207ENST00000461798 VTA1Q9NP79 307 aa10.74□□□□□ -0.69
BRCA1-207ENST00000461798 RAD50Q92878 1312 aa10.74□□□□□ -0.69
BRCA1-207ENST00000461798 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-207ENST00000461798 RBM47A0AV96 593 aaKnown RBP10.73□□□□□ -0.69
BRCA1-207ENST00000461798 DCDC2CA8MYV0 355 aa10.73□□□□□ -0.69
BRCA1-207ENST00000461798 B4E1Z4 1266 aa10.73□□□□□ -0.69
BRCA1-207ENST00000461798 NFIBO00712 420 aa10.73□□□□□ -0.69
BRCA1-207ENST00000461798 CABYRO75952 493 aa10.73□□□□□ -0.69
BRCA1-207ENST00000461798 ASGR1P07306 291 aa10.73□□□□□ -0.69
BRCA1-207ENST00000461798 SMPD1P17405 629 aa10.73□□□□□ -0.69
BRCA1-207ENST00000461798 CHMLP26374 656 aa10.73□□□□□ -0.69
BRCA1-207ENST00000461798 FAAP100Q0VG06 881 aa10.73□□□□□ -0.69
BRCA1-207ENST00000461798 FAM109BQ6ICB4 259 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-207ENST00000461798 ENAHQ8N8S7 591 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-207ENST00000461798 SLC43A3Q8NBI5 491 aa10.73□□□□□ -0.69
BRCA1-207ENST00000461798 PNMA1Q8ND90 353 aa10.73□□□□□ -0.69
BRCA1-207ENST00000461798 RUFY2Q8WXA3 655 aa10.73□□□□□ -0.69
BRCA1-207ENST00000461798 SEZ6LQ9BYH1 1024 aa10.73□□□□□ -0.69
BRCA1-207ENST00000461798 KAT14Q9H8E8 782 aa10.73□□□□□ -0.69
BRCA1-207ENST00000461798 PRDM5Q9NQX1 630 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-207ENST00000461798 FAM205CA6NFA0 338 aa10.72□□□□□ -0.69
BRCA1-207ENST00000461798 ARVCFO00192 962 aa10.72□□□□□ -0.69
BRCA1-207ENST00000461798 PQBP1O60828 265 aaKnown RBP10.72□□□□□ -0.69
BRCA1-207ENST00000461798 GOLGA8HP0CJ92 632 aa10.72□□□□□ -0.69
BRCA1-207ENST00000461798 EDNRBP24530 442 aa10.72□□□□□ -0.69
BRCA1-207ENST00000461798 ITGB8P26012 769 aa10.72□□□□□ -0.69
BRCA1-207ENST00000461798 ALDH5A1P51649 535 aaPredicted RBP10.72□□□□□ -0.69
BRCA1-207ENST00000461798 NUBP1P53384 320 aa10.72□□□□□ -0.69
BRCA1-207ENST00000461798 SEC23AQ15436 765 aa10.72□□□□□ -0.69
BRCA1-207ENST00000461798 SHHQ15465 462 aa10.72□□□□□ -0.69
BRCA1-207ENST00000461798 ASPRV1Q53RT3 343 aa10.72□□□□□ -0.69
BRCA1-207ENST00000461798 RNF207Q6ZRF8 634 aa10.72□□□□□ -0.69
BRCA1-207ENST00000461798 DNERQ8NFT8 737 aa10.72□□□□□ -0.69
BRCA1-207ENST00000461798 PURBQ96QR8 312 aaKnown RBP10.72□□□□□ -0.69
BRCA1-207ENST00000461798 UBA5Q9GZZ9 404 aa10.72□□□□□ -0.69
BRCA1-207ENST00000461798 AP5M1Q9H0R1 490 aa10.72□□□□□ -0.69
BRCA1-207ENST00000461798 PDGFCQ9NRA1 345 aa10.72□□□□□ -0.69
BRCA1-207ENST00000461798 TMEM39AQ9NV64 488 aa10.72□□□□□ -0.69
BRCA1-207ENST00000461798 TBX21Q9UL17 535 aa10.72□□□□□ -0.69
BRCA1-207ENST00000461798 MROH7Q68CQ1 1323 aa10.72□□□□□ -0.69
BRCA1-207ENST00000461798 SZT2Q5T011 3432 aa10.72□□□□□ -0.69
BRCA1-207ENST00000461798 A0A0U1RQG5 324 aaPredicted RBP10.71□□□□□ -0.69
BRCA1-207ENST00000461798 DYNC1LI2O43237 492 aaPredicted RBP10.71□□□□□ -0.69
BRCA1-207ENST00000461798 TNKSO95271 1327 aa10.71□□□□□ -0.69
BRCA1-207ENST00000461798 RAG1P15918 1043 aa10.71□□□□□ -0.69
BRCA1-207ENST00000461798 RPS6P62753 249 aaKnown RBP10.71□□□□□ -0.69
BRCA1-207ENST00000461798 FSCN1Q16658 493 aaKnown RBP10.71□□□□□ -0.69
BRCA1-207ENST00000461798 DUSP28Q4G0W2 176 aa10.71□□□□□ -0.69
BRCA1-207ENST00000461798 KIAA1211Q6ZU35 1233 aa10.71□□□□□ -0.69
BRCA1-207ENST00000461798 UBAC1Q9BSL1 405 aa10.71□□□□□ -0.69
BRCA1-207ENST00000461798 MTMR10Q9NXD2 777 aa10.71□□□□□ -0.69
BRCA1-207ENST00000461798 DDX49Q9Y6V7 483 aaKnown RBP10.71□□□□□ -0.69
BRCA1-207ENST00000461798 LAMA3Q16787 3333 aa10.7□□□□□ -0.7
BRCA1-207ENST00000461798 PTPDC1A2A3K4 754 aa10.7□□□□□ -0.7
BRCA1-207ENST00000461798 B4DLN1 442 aa10.7□□□□□ -0.7
BRCA1-207ENST00000461798 SGSM2O43147 1006 aa10.7□□□□□ -0.7
BRCA1-207ENST00000461798 ZEB2O60315 1214 aa10.7□□□□□ -0.7
BRCA1-207ENST00000461798 TIMP1P01033 207 aa10.7□□□□□ -0.7
BRCA1-207ENST00000461798 CD4P01730 458 aa10.7□□□□□ -0.7
BRCA1-207ENST00000461798 CYP21A2P08686 494 aa10.7□□□□□ -0.7
BRCA1-207ENST00000461798 PARP1P09874 1014 aaKnown RBP10.7□□□□□ -0.7
BRCA1-207ENST00000461798 CALML3P27482 149 aa10.7□□□□□ -0.7
BRCA1-207ENST00000461798 MRPL12P52815 198 aaKnown RBP10.7□□□□□ -0.7
BRCA1-207ENST00000461798 IRX6P78412 446 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-207ENST00000461798 BEX3Q00994 111 aa10.7□□□□□ -0.7
BRCA1-207ENST00000461798 PTH1RQ03431 593 aa10.7□□□□□ -0.7
BRCA1-207ENST00000461798 CDC37Q16543 378 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-207ENST00000461798 C9orf50Q5SZB4 431 aa10.7□□□□□ -0.7
BRCA1-207ENST00000461798 TMEM63BQ5T3F8 832 aa10.7□□□□□ -0.7
BRCA1-207ENST00000461798 SLC30A10Q6XR72 485 aa10.7□□□□□ -0.7
BRCA1-207ENST00000461798 NOL8Q76FK4 1167 aaKnown RBP10.7□□□□□ -0.7
BRCA1-207ENST00000461798 EEPD1Q7L9B9 569 aa10.7□□□□□ -0.7
BRCA1-207ENST00000461798 TLK2Q86UE8 772 aa10.7□□□□□ -0.7
BRCA1-207ENST00000461798 FBXO16Q8IX29 292 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-207ENST00000461798 FAM126BQ8IXS8 530 aa10.7□□□□□ -0.7
BRCA1-207ENST00000461798 ADGRF4Q8IZF3 695 aa10.7□□□□□ -0.7
BRCA1-207ENST00000461798 DEFB123Q8N688 67 aa10.7□□□□□ -0.7
BRCA1-207ENST00000461798 MAP4K1Q92918 833 aa10.7□□□□□ -0.7
BRCA1-207ENST00000461798 VTI1AQ96AJ9 217 aa10.7□□□□□ -0.7
BRCA1-207ENST00000461798 MPHOSPH6Q99547 160 aaKnown RBP10.7□□□□□ -0.7
BRCA1-207ENST00000461798 WDR11Q9BZH6 1224 aa10.7□□□□□ -0.7
BRCA1-207ENST00000461798 CPVLQ9H3G5 476 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms