RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 RNF4P78317 190 aa5.58□□□□□ -1.52
CLK1-206ENST00000461326 CAP1Q01518 475 aa5.58□□□□□ -1.52
CLK1-206ENST00000461326 LAPTM5Q13571 262 aa5.58□□□□□ -1.52
CLK1-206ENST00000461326 TAF7LQ5H9L4 462 aa5.58□□□□□ -1.52
CLK1-206ENST00000461326 ZFYVE27Q5T4F4 411 aa5.58□□□□□ -1.52
CLK1-206ENST00000461326 DAGLBQ8NCG7 672 aa5.58□□□□□ -1.52
CLK1-206ENST00000461326 HHIPL1Q96JK4 782 aa5.58□□□□□ -1.52
CLK1-206ENST00000461326 HDAC8Q9BY41 377 aa5.58□□□□□ -1.52
CLK1-206ENST00000461326 ST7Q9NRC1 585 aa5.58□□□□□ -1.52
CLK1-206ENST00000461326 KLHL14Q9P2G3 628 aa5.58□□□□□ -1.52
CLK1-206ENST00000461326 SUCOQ9UBS9 1254 aaKnown RBP5.58□□□□□ -1.52
CLK1-206ENST00000461326 TCFL5Q9UL49 500 aa5.58□□□□□ -1.52
CLK1-206ENST00000461326 TAF6LQ9Y6J9 622 aa5.58□□□□□ -1.52
CLK1-206ENST00000461326 LTBP3Q9NS15 1303 aa5.57□□□□□ -1.52
CLK1-206ENST00000461326 FAM221BA6H8Z2 402 aa5.57□□□□□ -1.52
CLK1-206ENST00000461326 AGRPO00253 132 aa5.57□□□□□ -1.52
CLK1-206ENST00000461326 SUV39H1O43463 412 aa5.57□□□□□ -1.52
CLK1-206ENST00000461326 PRICKLE3O43900 615 aaPredicted RBP5.57□□□□□ -1.52
CLK1-206ENST00000461326 BUB1BO60566 1050 aaPredicted RBP5.57□□□□□ -1.52
CLK1-206ENST00000461326 RAB3GAP1Q15042 981 aa5.57□□□□□ -1.52
CLK1-206ENST00000461326 ZYXQ15942 572 aaKnown RBP5.57□□□□□ -1.52
CLK1-206ENST00000461326 LONRF2Q1L5Z9 754 aa5.57□□□□□ -1.52
CLK1-206ENST00000461326 ZC3H12BQ5HYM0 836 aaKnown RBP5.57□□□□□ -1.52
CLK1-206ENST00000461326 UBXN11Q5T124 520 aa5.57□□□□□ -1.52
CLK1-206ENST00000461326 ZNF655Q8N720 491 aaPredicted RBP5.57□□□□□ -1.52
CLK1-206ENST00000461326 TP53I13Q8NBR0 393 aaPredicted RBP5.57□□□□□ -1.52
CLK1-206ENST00000461326 TCTN2Q96GX1 697 aa5.57□□□□□ -1.52
CLK1-206ENST00000461326 SLC6A18Q96N87 628 aa5.57□□□□□ -1.52
CLK1-206ENST00000461326 PLCD4Q9BRC7 762 aa5.57□□□□□ -1.52
CLK1-206ENST00000461326 USP40Q9NVE5 1235 aa5.57□□□□□ -1.52
CLK1-206ENST00000461326 PCDHA5Q9Y5H7 936 aa5.57□□□□□ -1.52
CLK1-206ENST00000461326 MRPL42Q9Y6G3 142 aaKnown RBP5.57□□□□□ -1.52
CLK1-206ENST00000461326 TMEM82A0PJX8 343 aa5.56□□□□□ -1.52
CLK1-206ENST00000461326 WTIPA6NIX2 430 aaPredicted RBP5.56□□□□□ -1.52
CLK1-206ENST00000461326 UBOX5O94941 541 aa5.56□□□□□ -1.52
CLK1-206ENST00000461326 SLURP1P55000 103 aa5.56□□□□□ -1.52
CLK1-206ENST00000461326 GNPTABQ3T906 1256 aa5.56□□□□□ -1.52
CLK1-206ENST00000461326 C2orf27AQ580R0 203 aa5.56□□□□□ -1.52
CLK1-206ENST00000461326 LRRC47Q8N1G4 583 aaKnown RBP5.56□□□□□ -1.52
CLK1-206ENST00000461326 SYNPOQ8N3V7 929 aa5.56□□□□□ -1.52
CLK1-206ENST00000461326 LINC00116Q8NCU8 138 aa5.56□□□□□ -1.52
CLK1-206ENST00000461326 MICAL1Q8TDZ2 1067 aa5.56□□□□□ -1.52
CLK1-206ENST00000461326 THAP3Q8WTV1 239 aaPredicted RBP5.56□□□□□ -1.52
CLK1-206ENST00000461326 KLHL6Q8WZ60 621 aa5.56□□□□□ -1.52
CLK1-206ENST00000461326 FCRL2Q96LA5 508 aaPredicted RBP5.56□□□□□ -1.52
CLK1-206ENST00000461326 DNAJC7Q99615 494 aa5.56□□□□□ -1.52
CLK1-206ENST00000461326 KIF2CQ99661 725 aa5.56□□□□□ -1.52
CLK1-206ENST00000461326 TNFRSF10DQ9UBN6 386 aa5.56□□□□□ -1.52
CLK1-206ENST00000461326 ANKRD34BA5PLL1 514 aa5.55□□□□□ -1.52
CLK1-206ENST00000461326 B2RBV5 119 aa5.55□□□□□ -1.52
CLK1-206ENST00000461326 FFAR3O14843 346 aa5.55□□□□□ -1.52
CLK1-206ENST00000461326 AKAP8O43823 692 aaKnown RBP5.55□□□□□ -1.52
CLK1-206ENST00000461326 SUSD5O60279 629 aa5.55□□□□□ -1.52
CLK1-206ENST00000461326 FKTNO75072 461 aa5.55□□□□□ -1.52
CLK1-206ENST00000461326 SYPP08247 313 aa5.55□□□□□ -1.52
CLK1-206ENST00000461326 PFKLP17858 780 aa5.55□□□□□ -1.52
CLK1-206ENST00000461326 POLR2BP30876 1174 aaKnown RBP5.55□□□□□ -1.52
CLK1-206ENST00000461326 HSF5Q4G112 596 aaPredicted RBP5.55□□□□□ -1.52
CLK1-206ENST00000461326 EGFLAMQ63HQ2 1017 aa5.55□□□□□ -1.52
CLK1-206ENST00000461326 MRM1Q6IN84 353 aaKnown RBP5.55□□□□□ -1.52
CLK1-206ENST00000461326 KIAA1211LQ6NV74 962 aa5.55□□□□□ -1.52
CLK1-206ENST00000461326 HOMER1Q86YM7 354 aa5.55□□□□□ -1.52
CLK1-206ENST00000461326 JMYQ8N9B5 988 aa5.55□□□□□ -1.52
CLK1-206ENST00000461326 SH3TC2Q8TF17 1288 aa5.55□□□□□ -1.52
CLK1-206ENST00000461326 VWCEQ96DN2 955 aa5.55□□□□□ -1.52
CLK1-206ENST00000461326 SGSM3Q96HU1 749 aa5.55□□□□□ -1.52
CLK1-206ENST00000461326 RNPC3Q96LT9 517 aaKnown RBP5.55□□□□□ -1.52
CLK1-206ENST00000461326 PUS7Q96PZ0 661 aaKnown RBP5.55□□□□□ -1.52
CLK1-206ENST00000461326 SRRDQ9UH36 339 aa5.55□□□□□ -1.52
CLK1-206ENST00000461326 NUDT19A8MXV4 375 aa5.54□□□□□ -1.52
CLK1-206ENST00000461326 CDC45O75419 566 aa5.54□□□□□ -1.52
CLK1-206ENST00000461326 ENDOUP21128 410 aaKnown RBP5.54□□□□□ -1.52
CLK1-206ENST00000461326 NCKAP1LP55160 1127 aa5.54□□□□□ -1.52
CLK1-206ENST00000461326 ZXDAP98168 799 aa5.54□□□□□ -1.52
CLK1-206ENST00000461326 SSRP1Q08945 709 aaKnown RBP5.54□□□□□ -1.52
CLK1-206ENST00000461326 PLEKHG4Q58EX7 1191 aa5.54□□□□□ -1.52
CLK1-206ENST00000461326 TMEM192Q8IY95 271 aa5.54□□□□□ -1.52
CLK1-206ENST00000461326 CRACR2BQ8N4Y2 399 aaPredicted RBP5.54□□□□□ -1.52
CLK1-206ENST00000461326 APPBP2Q92624 585 aa5.54□□□□□ -1.52
CLK1-206ENST00000461326 HAUS7Q99871 368 aa5.54□□□□□ -1.52
CLK1-206ENST00000461326 GBP3Q9H0R5 595 aa5.54□□□□□ -1.52
CLK1-206ENST00000461326 TMEM260Q9NX78 707 aa5.54□□□□□ -1.52
CLK1-206ENST00000461326 PRR13Q9NZ81 148 aa5.54□□□□□ -1.52
CLK1-206ENST00000461326 FAM86C2PA6NEL3 165 aa5.53□□□□□ -1.52
CLK1-206ENST00000461326 FADS2P1A8MWK0 482 aa5.53□□□□□ -1.52
CLK1-206ENST00000461326 MAGEA10P43363 369 aaPredicted RBP5.53□□□□□ -1.52
CLK1-206ENST00000461326 CYP4F8P98187 520 aa5.53□□□□□ -1.52
CLK1-206ENST00000461326 CBX2Q14781 532 aaPredicted RBP5.53□□□□□ -1.52
CLK1-206ENST00000461326 TCEAL1Q15170 157 aa5.53□□□□□ -1.52
CLK1-206ENST00000461326 SLC10A6Q3KNW5 377 aa5.53□□□□□ -1.52
CLK1-206ENST00000461326 ANKRD39Q53RE8 183 aa5.53□□□□□ -1.52
CLK1-206ENST00000461326 HEATR6Q6AI08 1181 aaKnown RBP5.53□□□□□ -1.52
CLK1-206ENST00000461326 CCDC144CPQ8IYA2 1237 aa5.53□□□□□ -1.52
CLK1-206ENST00000461326 ZSWIM2Q8NEG5 633 aa5.53□□□□□ -1.52
CLK1-206ENST00000461326 MKRN2Q9H000 416 aaKnown RBP5.53□□□□□ -1.52
CLK1-206ENST00000461326 SLKQ9H2G2 1235 aaPredicted RBP5.53□□□□□ -1.52
CLK1-206ENST00000461326 GPR55Q9Y2T6 319 aaPredicted RBP5.53□□□□□ -1.52
CLK1-206ENST00000461326 KDM2BQ8NHM5 1336 aa5.52□□□□□ -1.53
CLK1-206ENST00000461326 CCDC163A0A0D9SF12 145 aa5.52□□□□□ -1.53
CLK1-206ENST00000461326 ANKRD62A6NC57 917 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms