RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 PIM2Q9P1W9 311 aa10.08□□□□□ -0.8
ECHDC1-212ENST00000461239 IRS4O14654 1257 aaPredicted RBP10.07□□□□□ -0.8
ECHDC1-212ENST00000461239 FSCN2O14926 492 aa10.07□□□□□ -0.8
ECHDC1-212ENST00000461239 KLF4O43474 513 aa10.07□□□□□ -0.8
ECHDC1-212ENST00000461239 HOXA10P31260 410 aaPredicted RBP10.07□□□□□ -0.8
ECHDC1-212ENST00000461239 RPL6Q02878 288 aaKnown RBP10.07□□□□□ -0.8
ECHDC1-212ENST00000461239 NEXNQ0ZGT2 675 aa10.07□□□□□ -0.8
ECHDC1-212ENST00000461239 GPR162Q16538 588 aa10.07□□□□□ -0.8
ECHDC1-212ENST00000461239 STYK1Q6J9G0 422 aa10.07□□□□□ -0.8
ECHDC1-212ENST00000461239 SLC4A10Q6U841 1118 aa10.07□□□□□ -0.8
ECHDC1-212ENST00000461239 OLFM4Q6UX06 510 aa10.07□□□□□ -0.8
ECHDC1-212ENST00000461239 ANKS3Q6ZW76 656 aa10.07□□□□□ -0.8
ECHDC1-212ENST00000461239 REXO1Q8N1G1 1221 aaKnown RBP10.07□□□□□ -0.8
ECHDC1-212ENST00000461239 CPLX3Q8WVH0 158 aa10.07□□□□□ -0.8
ECHDC1-212ENST00000461239 EDARADDQ8WWZ3 215 aa10.07□□□□□ -0.8
ECHDC1-212ENST00000461239 ZNF622Q969S3 477 aaKnown RBP eCLIP10.07□□□□□ -0.8
ECHDC1-212ENST00000461239 ANAPC16Q96DE5 110 aa10.07□□□□□ -0.8
ECHDC1-212ENST00000461239 CDHR2Q9BYE9 1310 aa10.07□□□□□ -0.8
ECHDC1-212ENST00000461239 LAMB2P55268 1798 aa10.06□□□□□ -0.8
ECHDC1-212ENST00000461239 SLX4Q8IY92 1834 aa10.06□□□□□ -0.8
ECHDC1-212ENST00000461239 BPNT1O95861 308 aa10.06□□□□□ -0.8
ECHDC1-212ENST00000461239 NPR1P16066 1061 aa10.06□□□□□ -0.8
ECHDC1-212ENST00000461239 ZNF165P49910 485 aa10.06□□□□□ -0.8
ECHDC1-212ENST00000461239 PRELPP51888 382 aa10.06□□□□□ -0.8
ECHDC1-212ENST00000461239 SF3B3Q15393 1217 aaKnown RBP10.06□□□□□ -0.8
ECHDC1-212ENST00000461239 DALRD3Q5D0E6 543 aaKnown RBP10.06□□□□□ -0.8
ECHDC1-212ENST00000461239 LCE2CQ5TA81 110 aa10.06□□□□□ -0.8
ECHDC1-212ENST00000461239 FAM117BQ6P1L5 589 aa10.06□□□□□ -0.8
ECHDC1-212ENST00000461239 TTLL6Q8N841 843 aa10.06□□□□□ -0.8
ECHDC1-212ENST00000461239 GALNT6Q8NCL4 622 aa10.06□□□□□ -0.8
ECHDC1-212ENST00000461239 ARHGAP45Q92619 1136 aa10.06□□□□□ -0.8
ECHDC1-212ENST00000461239 KAZALD1Q96I82 304 aa10.06□□□□□ -0.8
ECHDC1-212ENST00000461239 PRDM6Q9NQX0 595 aa10.06□□□□□ -0.8
ECHDC1-212ENST00000461239 PRKAG3Q9UGI9 489 aa10.06□□□□□ -0.8
ECHDC1-212ENST00000461239 ZNRF3Q9ULT6 936 aa10.06□□□□□ -0.8
ECHDC1-212ENST00000461239 POLR3KQ9Y2Y1 108 aaPredicted RBP10.06□□□□□ -0.8
ECHDC1-212ENST00000461239 OIP5O43482 229 aa10.05□□□□□ -0.8
ECHDC1-212ENST00000461239 ALDH1L1O75891 902 aa10.05□□□□□ -0.8
ECHDC1-212ENST00000461239 CYP11A1P05108 521 aa10.05□□□□□ -0.8
ECHDC1-212ENST00000461239 CTSBP07858 339 aa10.05□□□□□ -0.8
ECHDC1-212ENST00000461239 NBPF7P0C2Y1 421 aaPredicted RBP10.05□□□□□ -0.8
ECHDC1-212ENST00000461239 TRIM27P14373 513 aa10.05□□□□□ -0.8
ECHDC1-212ENST00000461239 MCM4P33991 863 aa10.05□□□□□ -0.8
ECHDC1-212ENST00000461239 ARL4DP49703 201 aa10.05□□□□□ -0.8
ECHDC1-212ENST00000461239 CLCQ05315 142 aa10.05□□□□□ -0.8
ECHDC1-212ENST00000461239 COL9A3Q14050 684 aaPredicted RBP10.05□□□□□ -0.8
ECHDC1-212ENST00000461239 EPHA10Q5JZY3 1008 aa10.05□□□□□ -0.8
ECHDC1-212ENST00000461239 UBE3BQ7Z3V4 1068 aa10.05□□□□□ -0.8
ECHDC1-212ENST00000461239 WFDC8Q8IUA0 241 aa10.05□□□□□ -0.8
ECHDC1-212ENST00000461239 FAM169BQ8N8A8 192 aa10.05□□□□□ -0.8
ECHDC1-212ENST00000461239 GPBAR1Q8TDU6 330 aa10.05□□□□□ -0.8
ECHDC1-212ENST00000461239 HNRNPLLQ8WVV9 542 aaKnown RBP10.05□□□□□ -0.8
ECHDC1-212ENST00000461239 KCNB2Q92953 911 aa10.05□□□□□ -0.8
ECHDC1-212ENST00000461239 ZC3H12CQ9C0D7 883 aaKnown RBP10.05□□□□□ -0.8
ECHDC1-212ENST00000461239 USP44Q9H0E7 712 aa10.05□□□□□ -0.8
ECHDC1-212ENST00000461239 SNED1Q8TER0 1413 aa10.05□□□□□ -0.8
ECHDC1-212ENST00000461239 UTYO14607 1347 aa10.05□□□□□ -0.8
ECHDC1-212ENST00000461239 ABCC4O15439 1325 aa10.05□□□□□ -0.8
ECHDC1-212ENST00000461239 SHISA8B8ZZ34 492 aa10.04□□□□□ -0.8
ECHDC1-212ENST00000461239 EIF4EBP3O60516 100 aaPredicted RBP10.04□□□□□ -0.8
ECHDC1-212ENST00000461239 PDE8AO60658 829 aa10.04□□□□□ -0.8
ECHDC1-212ENST00000461239 GIPRP48546 466 aa10.04□□□□□ -0.8
ECHDC1-212ENST00000461239 CDK8P49336 464 aa10.04□□□□□ -0.8
ECHDC1-212ENST00000461239 FOXO4P98177 505 aa10.04□□□□□ -0.8
ECHDC1-212ENST00000461239 POU4F3Q15319 338 aa10.04□□□□□ -0.8
ECHDC1-212ENST00000461239 ATF7IPQ6VMQ6 1270 aa10.04□□□□□ -0.8
ECHDC1-212ENST00000461239 GK5Q6ZS86 529 aa10.04□□□□□ -0.8
ECHDC1-212ENST00000461239 TTLL11Q8NHH1 800 aa10.04□□□□□ -0.8
ECHDC1-212ENST00000461239 IRF7Q92985 503 aa10.04□□□□□ -0.8
ECHDC1-212ENST00000461239 BTBD6Q96KE9 485 aa10.04□□□□□ -0.8
ECHDC1-212ENST00000461239 CRAMP1Q96RY5 1269 aa10.04□□□□□ -0.8
ECHDC1-212ENST00000461239 PLA2G12BQ9BX93 195 aa10.04□□□□□ -0.8
ECHDC1-212ENST00000461239 CCDC86Q9H6F5 360 aaKnown RBP10.04□□□□□ -0.8
ECHDC1-212ENST00000461239 KRT82Q9NSB4 513 aa10.04□□□□□ -0.8
ECHDC1-212ENST00000461239 ARFGEF1Q9Y6D6 1849 aa10.04□□□□□ -0.8
ECHDC1-212ENST00000461239 TAF1P21675 1872 aa10.04□□□□□ -0.8
ECHDC1-212ENST00000461239 KIF16BQ96L93 1317 aa10.04□□□□□ -0.8
ECHDC1-212ENST00000461239 GRM8O00222 908 aa10.03□□□□□ -0.8
ECHDC1-212ENST00000461239 CSF1RP07333 972 aa10.03□□□□□ -0.8
ECHDC1-212ENST00000461239 SLURP2P0DP57 97 aa10.03□□□□□ -0.8
ECHDC1-212ENST00000461239 MAOBP27338 520 aa10.03□□□□□ -0.8
ECHDC1-212ENST00000461239 EIF6P56537 245 aaKnown RBP10.03□□□□□ -0.8
ECHDC1-212ENST00000461239 RAB33AQ14088 237 aa10.03□□□□□ -0.8
ECHDC1-212ENST00000461239 BMS1Q14692 1282 aaKnown RBP10.03□□□□□ -0.8
ECHDC1-212ENST00000461239 SETDB1Q15047 1291 aa10.03□□□□□ -0.8
ECHDC1-212ENST00000461239 INTS3Q68E01 1043 aaKnown RBP10.03□□□□□ -0.8
ECHDC1-212ENST00000461239 FRAT1Q92837 279 aaPredicted RBP10.03□□□□□ -0.8
ECHDC1-212ENST00000461239 CELF1Q92879 486 aaKnown RBP10.03□□□□□ -0.8
ECHDC1-212ENST00000461239 KLHDC7BQ96G42 594 aa10.03□□□□□ -0.8
ECHDC1-212ENST00000461239 RBM17Q96I25 401 aaKnown RBP10.03□□□□□ -0.8
ECHDC1-212ENST00000461239 SUCLG2Q96I99 432 aa10.03□□□□□ -0.8
ECHDC1-212ENST00000461239 FERD3LQ96RJ6 166 aa10.03□□□□□ -0.8
ECHDC1-212ENST00000461239 CORO1BQ9BR76 489 aa10.03□□□□□ -0.8
ECHDC1-212ENST00000461239 API5Q9BZZ5 524 aaKnown RBP10.03□□□□□ -0.8
ECHDC1-212ENST00000461239 EHMT1Q9H9B1 1298 aa10.03□□□□□ -0.8
ECHDC1-212ENST00000461239 SMAD7O15105 426 aaKnown RBP10.02□□□□□ -0.81
ECHDC1-212ENST00000461239 GRIN3BO60391 1043 aa10.02□□□□□ -0.81
ECHDC1-212ENST00000461239 ATE1O95260 518 aa10.02□□□□□ -0.81
ECHDC1-212ENST00000461239 NID1P14543 1247 aa10.02□□□□□ -0.81
ECHDC1-212ENST00000461239 ALDH1B1P30837 517 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms