RNA–Protein interactions for RNA: ENST00000461074.1

MCF2L2-205, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 7,666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-205ENST00000461074 POLR3EQ9NVU0 708 aa9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 VSIG1Q86XK7 387 aa9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 ZNF594Q96JF6 807 aaPredicted RBP9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 TESPA1A2RU30 521 aaPredicted RBP9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 A6NJR5 290 aa9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 FMNL1O95466 1100 aaPredicted RBP9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 SLFN12LQ6IEE8 588 aa9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 RRAGAQ7L523 313 aa9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 TAB2Q9NYJ8 693 aa9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 TARBP1Q13395 1621 aaKnown RBP9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 IKBKBO14920 756 aa9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 PSMC2P35998 433 aaKnown RBP9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 VPS54Q9P1Q0 977 aa9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 SLC8A2Q9UPR5 921 aa9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 RGS16O15492 202 aaPredicted RBP9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 AP3B2Q13367 1082 aa9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 PRR16Q569H4 304 aa9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 CASC4Q6P4E1 433 aa9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 TUBB6Q9BUF5 446 aa9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 MXD3Q9BW11 206 aa9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 USP44Q9H0E7 712 aa9.23□□□□□ -0.93
MCF2L2-205ENST00000461074 RPN1P04843 607 aaKnown RBP9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 ALAS1P13196 640 aa9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 ARL6IP4Q66PJ3 421 aaKnown RBP9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 RAB44Q7Z6P3 723 aaPredicted RBP9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 EPSTI1Q96J88 318 aa9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 CFAP65Q6ZU64 1925 aaKnown RBP9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 PNMA6EA0A0J9YXQ4 647 aa9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 RPS6KA2Q15349 733 aa9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 ABI1Q8IZP0 508 aa9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 COA1Q9GZY4 146 aa9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 DIS3Q9Y2L1 958 aaKnown RBP9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 TMEM94Q12767 1356 aa9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 TTI1O43156 1089 aa9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 SLC26A4O43511 780 aa9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 PFKFB1P16118 471 aa9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 TCP11Q8WWU5 503 aa9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 KIAA1586Q9HCI6 787 aa9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 PCDHA1Q9Y5I3 950 aa9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 BUB1BO60566 1050 aaPredicted RBP9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 NDUFAF2Q8N183 169 aa9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 ATP2C2O75185 946 aa9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 GNAT1P11488 350 aa9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 GTF2A1P52655 376 aaPredicted RBP9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 MYO1EQ12965 1108 aa9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 KYAT1Q16773 422 aa9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 KRT24Q2M2I5 525 aa9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 ARHGEF25Q86VW2 580 aa9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 NEK9Q8TD19 979 aa9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 ZNF408Q9H9D4 720 aa9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 PI4KBQ9UBF8 816 aa9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 PRDM1O75626 825 aa9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 LDHAP00338 332 aaKnown RBP9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 DYMQ7RTS9 669 aa9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 METTL13Q8N6R0 699 aa9.22□□□□□ -0.93
MCF2L2-205ENST00000461074 SMIM23A6NLE4 172 aa9.21□□□□□ -0.93
MCF2L2-205ENST00000461074 DDX39AO00148 427 aaKnown RBP9.21□□□□□ -0.93
MCF2L2-205ENST00000461074 INPP5BP32019 993 aa9.21□□□□□ -0.93
MCF2L2-205ENST00000461074 GPR162Q16538 588 aa9.21□□□□□ -0.93
MCF2L2-205ENST00000461074 LRCH2Q5VUJ6 765 aa9.21□□□□□ -0.93
MCF2L2-205ENST00000461074 KRT39Q6A163 491 aa9.21□□□□□ -0.93
MCF2L2-205ENST00000461074 GADL1Q6ZQY3 521 aa9.21□□□□□ -0.93
MCF2L2-205ENST00000461074 DCAF4Q8WV16 495 aa9.21□□□□□ -0.93
MCF2L2-205ENST00000461074 TRIM56Q9BRZ2 755 aaKnown RBP9.21□□□□□ -0.93
MCF2L2-205ENST00000461074 INO80BQ9C086 356 aaPredicted RBP9.21□□□□□ -0.93
MCF2L2-205ENST00000461074 KLHL14Q9P2G3 628 aa9.21□□□□□ -0.93
MCF2L2-205ENST00000461074 CROCC2H7BZ55 1655 aa9.21□□□□□ -0.93
MCF2L2-205ENST00000461074 LAMC1P11047 1609 aa9.21□□□□□ -0.93
MCF2L2-205ENST00000461074 TBC1D8O95759 1140 aa9.21□□□□□ -0.93
MCF2L2-205ENST00000461074 JAK3P52333 1124 aa9.21□□□□□ -0.93
MCF2L2-205ENST00000461074 TCP10Q12799 353 aa9.21□□□□□ -0.93
MCF2L2-205ENST00000461074 FBXO18Q8NFZ0 1043 aa9.21□□□□□ -0.93
MCF2L2-205ENST00000461074 PHKBQ93100 1093 aa9.21□□□□□ -0.93
MCF2L2-205ENST00000461074 EFCAB8A8MWE9 144 aa9.21□□□□□ -0.93
MCF2L2-205ENST00000461074 MYL7Q01449 175 aa9.21□□□□□ -0.93
MCF2L2-205ENST00000461074 ARMCX2Q7L311 632 aa9.21□□□□□ -0.93
MCF2L2-205ENST00000461074 MYRIPQ8NFW9 859 aa9.21□□□□□ -0.93
MCF2L2-205ENST00000461074 CABS1Q96KC9 395 aa9.21□□□□□ -0.93
MCF2L2-205ENST00000461074 NCOA5Q9HCD5 579 aaKnown RBP9.21□□□□□ -0.93
MCF2L2-205ENST00000461074 ANAPC5Q9UJX4 755 aa9.21□□□□□ -0.93
MCF2L2-205ENST00000461074 CIITAP33076 1130 aa9.21□□□□□ -0.94
MCF2L2-205ENST00000461074 PIK3CAP42336 1068 aa9.21□□□□□ -0.94
MCF2L2-205ENST00000461074 CRKLP46109 303 aaKnown RBP9.21□□□□□ -0.94
MCF2L2-205ENST00000461074 U2AF1L4Q8WU68 220 aaKnown RBP9.21□□□□□ -0.94
MCF2L2-205ENST00000461074 SERTAD1Q9UHV2 236 aa9.21□□□□□ -0.94
MCF2L2-205ENST00000461074 USTQ9Y2C2 406 aa9.21□□□□□ -0.94
MCF2L2-205ENST00000461074 HEG1Q9ULI3 1381 aa9.21□□□□□ -0.94
MCF2L2-205ENST00000461074 HEXIM1O94992 359 aaKnown RBP9.21□□□□□ -0.94
MCF2L2-205ENST00000461074 ATF2P15336 505 aa9.21□□□□□ -0.94
MCF2L2-205ENST00000461074 LIFRP42702 1097 aa9.21□□□□□ -0.94
MCF2L2-205ENST00000461074 ADAM9Q13443 819 aa9.21□□□□□ -0.94
MCF2L2-205ENST00000461074 EXOC3L4Q17RC7 722 aa9.21□□□□□ -0.94
MCF2L2-205ENST00000461074 EP400NLQ6ZTU2 488 aa9.21□□□□□ -0.94
MCF2L2-205ENST00000461074 LARP4BQ92615 738 aaKnown RBP9.21□□□□□ -0.94
MCF2L2-205ENST00000461074 MAP4K1Q92918 833 aa9.21□□□□□ -0.94
MCF2L2-205ENST00000461074 TRIM62Q9BVG3 475 aa9.21□□□□□ -0.94
MCF2L2-205ENST00000461074 RASSF4Q9H2L5 321 aa9.21□□□□□ -0.94
MCF2L2-205ENST00000461074 OVOS2A0A0G2JMS6 1433 aa9.21□□□□□ -0.94
MCF2L2-205ENST00000461074 OVOS2A0A0J9YW53 1432 aa9.21□□□□□ -0.94
MCF2L2-205ENST00000461074 OVOS2Q6IE36 1432 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms