RNA–Protein interactions for RNA: ENST00000460957.1

GGA1-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 790 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-216ENST00000460957 RIOX1Q9H6W3 641 aa18.43■□□□□ 0.54
GGA1-216ENST00000460957 LOC102724159A0A0B4J2E5 919 aa18.42■□□□□ 0.54
GGA1-216ENST00000460957 PNMA6FA0A0J9YX94 578 aa18.42■□□□□ 0.54
GGA1-216ENST00000460957 EIF5BO60841 1220 aaKnown RBP18.42■□□□□ 0.54
GGA1-216ENST00000460957 TNFAIP2Q03169 654 aa18.42■□□□□ 0.54
GGA1-216ENST00000460957 PWP2Q15269 919 aaKnown RBP18.42■□□□□ 0.54
GGA1-216ENST00000460957 LRRC41Q15345 812 aa18.42■□□□□ 0.54
GGA1-216ENST00000460957 FBXO16Q8IX29 292 aaPredicted RBP18.42■□□□□ 0.54
GGA1-216ENST00000460957 RGS22Q8NE09 1264 aa18.42■□□□□ 0.54
GGA1-216ENST00000460957 LENG1Q96BZ8 264 aaPredicted RBP18.42■□□□□ 0.54
GGA1-216ENST00000460957 MAF1Q9H063 256 aa18.42■□□□□ 0.54
GGA1-216ENST00000460957 VTA1Q9NP79 307 aa18.42■□□□□ 0.54
GGA1-216ENST00000460957 SNX14Q9Y5W7 946 aa18.42■□□□□ 0.54
GGA1-216ENST00000460957 ZBTB43O43298 467 aa18.41■□□□□ 0.54
GGA1-216ENST00000460957 EPB41L2O43491 1005 aaKnown RBP18.41■□□□□ 0.54
GGA1-216ENST00000460957 DUSP11O75319 330 aaKnown RBP18.41■□□□□ 0.54
GGA1-216ENST00000460957 C6orf222P0C671 652 aaPredicted RBP18.41■□□□□ 0.54
GGA1-216ENST00000460957 MNX1P50219 401 aaPredicted RBP18.41■□□□□ 0.54
GGA1-216ENST00000460957 ATN1P54259 1190 aaPredicted RBP18.41■□□□□ 0.54
GGA1-216ENST00000460957 ARHGEF16Q5VV41 709 aa18.41■□□□□ 0.54
GGA1-216ENST00000460957 MTMR8Q96EF0 704 aa18.41■□□□□ 0.54
GGA1-216ENST00000460957 AP5M1Q9H0R1 490 aa18.41■□□□□ 0.54
GGA1-216ENST00000460957 RBM28Q9NW13 759 aaKnown RBP18.41■□□□□ 0.54
GGA1-216ENST00000460957 BAZ2BQ9UIF8 2168 aaKnown RBP18.4■□□□□ 0.54
GGA1-216ENST00000460957 KLF18A0A0U1RQI7 1052 aa18.4■□□□□ 0.54
GGA1-216ENST00000460957 CASTP20810 708 aaKnown RBP18.4■□□□□ 0.54
GGA1-216ENST00000460957 ADCYAP1R1P41586 468 aa18.4■□□□□ 0.54
GGA1-216ENST00000460957 EXOSC10Q01780 885 aaKnown RBP18.4■□□□□ 0.54
GGA1-216ENST00000460957 SGMS1Q86VZ5 419 aa18.4■□□□□ 0.54
GGA1-216ENST00000460957 CCDC82Q8N4S0 544 aa18.4■□□□□ 0.54
GGA1-216ENST00000460957 FANCBQ8NB91 859 aa18.4■□□□□ 0.54
GGA1-216ENST00000460957 NSUN6Q8TEA1 469 aaKnown RBP18.4■□□□□ 0.54
GGA1-216ENST00000460957 FERMT2Q96AC1 680 aa18.4■□□□□ 0.54
GGA1-216ENST00000460957 VTI1AQ96AJ9 217 aa18.4■□□□□ 0.54
GGA1-216ENST00000460957 SPZ1Q9BXG8 430 aa18.4■□□□□ 0.54
GGA1-216ENST00000460957 LCTP09848 1927 aa18.4■□□□□ 0.54
GGA1-216ENST00000460957 SYNRGQ9UMZ2 1314 aa18.4■□□□□ 0.54
GGA1-216ENST00000460957 GOLGA8AA7E2F4 631 aa18.39■□□□□ 0.53
GGA1-216ENST00000460957 GOLGA8BA8MQT2 603 aa18.39■□□□□ 0.53
GGA1-216ENST00000460957 H0YGN5 161 aa18.39■□□□□ 0.53
GGA1-216ENST00000460957 TNRC18O15417 2968 aaPredicted RBP18.39■□□□□ 0.53
GGA1-216ENST00000460957 CYTH3O43739 400 aa18.39■□□□□ 0.53
GGA1-216ENST00000460957 PLEKHA8P1O95397 391 aa18.39■□□□□ 0.53
GGA1-216ENST00000460957 COL6A1P12109 1028 aa18.39■□□□□ 0.53
GGA1-216ENST00000460957 SMARCA1P28370 1054 aa18.39■□□□□ 0.53
GGA1-216ENST00000460957 RTN1Q16799 776 aa18.39■□□□□ 0.53
GGA1-216ENST00000460957 IQSEC1Q6DN90 963 aa18.39■□□□□ 0.53
GGA1-216ENST00000460957 APOA5Q6Q788 366 aa18.39■□□□□ 0.53
GGA1-216ENST00000460957 Q6ZUG5 572 aa18.39■□□□□ 0.53
GGA1-216ENST00000460957 PCSK9Q8NBP7 692 aaKnown RBP18.39■□□□□ 0.53
GGA1-216ENST00000460957 TBC1D5Q92609 795 aa18.39■□□□□ 0.53
GGA1-216ENST00000460957 CUL5Q93034 780 aa18.39■□□□□ 0.53
GGA1-216ENST00000460957 RMDN3Q96TC7 470 aa18.39■□□□□ 0.53
GGA1-216ENST00000460957 DDX49Q9Y6V7 483 aaKnown RBP18.39■□□□□ 0.53
GGA1-216ENST00000460957 GCOM1H8Y6P7 765 aaPredicted RBP18.38■□□□□ 0.53
GGA1-216ENST00000460957 POLR2MP0CAP2 368 aa18.38■□□□□ 0.53
GGA1-216ENST00000460957 CPA1P15085 419 aa18.38■□□□□ 0.53
GGA1-216ENST00000460957 COL9A3Q14050 684 aaPredicted RBP18.38■□□□□ 0.53
GGA1-216ENST00000460957 TLK2Q86UE8 772 aa18.38■□□□□ 0.53
GGA1-216ENST00000460957 CMTR1Q8N1G2 835 aaKnown RBP18.38■□□□□ 0.53
GGA1-216ENST00000460957 SAMD3Q8N6K7 520 aa18.38■□□□□ 0.53
GGA1-216ENST00000460957 SYTL5Q8TDW5 730 aaPredicted RBP18.38■□□□□ 0.53
GGA1-216ENST00000460957 KCNB2Q92953 911 aa18.38■□□□□ 0.53
GGA1-216ENST00000460957 TAAR1Q96RJ0 339 aa18.38■□□□□ 0.53
GGA1-216ENST00000460957 MAP3K20Q9NYL2 800 aaKnown RBP18.38■□□□□ 0.53
GGA1-216ENST00000460957 PRKAG2Q9UGJ0 569 aa18.38■□□□□ 0.53
GGA1-216ENST00000460957 ASTN1O14525 1302 aa18.38■□□□□ 0.53
GGA1-216ENST00000460957 BRCA2P51587 3418 aa18.38■□□□□ 0.53
GGA1-216ENST00000460957 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.37■□□□□ 0.53
GGA1-216ENST00000460957 ZEB2O60315 1214 aa18.37■□□□□ 0.53
GGA1-216ENST00000460957 PPP1R11O60927 126 aaPredicted RBP18.37■□□□□ 0.53
GGA1-216ENST00000460957 EIF2AK2P19525 551 aaKnown RBP18.37■□□□□ 0.53
GGA1-216ENST00000460957 RPS6KB1P23443 525 aa18.37■□□□□ 0.53
GGA1-216ENST00000460957 LRRC26Q2I0M4 334 aa18.37■□□□□ 0.53
GGA1-216ENST00000460957 GNASQ5JWF2 1037 aa18.37■□□□□ 0.53
GGA1-216ENST00000460957 SRBD1Q8N5C6 995 aaKnown RBP18.37■□□□□ 0.53
GGA1-216ENST00000460957 MORC4Q8TE76 937 aa18.37■□□□□ 0.53
GGA1-216ENST00000460957 BRF1Q92994 677 aa18.37■□□□□ 0.53
GGA1-216ENST00000460957 TSEN34Q9BSV6 310 aaKnown RBP18.37■□□□□ 0.53
GGA1-216ENST00000460957 USP26Q9BXU7 913 aa18.37■□□□□ 0.53
GGA1-216ENST00000460957 WDR11Q9BZH6 1224 aa18.37■□□□□ 0.53
GGA1-216ENST00000460957 PDGFCQ9NRA1 345 aa18.37■□□□□ 0.53
GGA1-216ENST00000460957 ATP11BQ9Y2G3 1177 aa18.37■□□□□ 0.53
GGA1-216ENST00000460957 LRRC37A2A6NM11 1700 aa18.37■□□□□ 0.53
GGA1-216ENST00000460957 MOXD2PA6NHM9 499 aa18.36■□□□□ 0.53
GGA1-216ENST00000460957 DYNC1LI2O43237 492 aaPredicted RBP18.36■□□□□ 0.53
GGA1-216ENST00000460957 ADAMTS4O75173 837 aa18.36■□□□□ 0.53
GGA1-216ENST00000460957 HOXA13P31271 388 aaPredicted RBP18.36■□□□□ 0.53
GGA1-216ENST00000460957 METAP2P50579 478 aaKnown RBP eCLIP18.36■□□□□ 0.53
GGA1-216ENST00000460957 APOBRQ0VD83 1088 aa18.36■□□□□ 0.53
GGA1-216ENST00000460957 PPP2R5BQ15173 497 aa18.36■□□□□ 0.53
GGA1-216ENST00000460957 STXBP2Q15833 593 aa18.36■□□□□ 0.53
GGA1-216ENST00000460957 KCNA10Q16322 511 aa18.36■□□□□ 0.53
GGA1-216ENST00000460957 SLC39A5Q6ZMH5 540 aa18.36■□□□□ 0.53
GGA1-216ENST00000460957 TMTC3Q6ZXV5 915 aa18.36■□□□□ 0.53
GGA1-216ENST00000460957 FCHSD1Q86WN1 690 aa18.36■□□□□ 0.53
GGA1-216ENST00000460957 SMARCC2Q8TAQ2 1214 aa18.36■□□□□ 0.53
GGA1-216ENST00000460957 ALPK3Q96L96 1907 aa18.36■□□□□ 0.53
GGA1-216ENST00000460957 GLT1D1Q96MS3 346 aa18.36■□□□□ 0.53
GGA1-216ENST00000460957 IWS1Q96ST2 819 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms