RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 CTNND1O60716 968 aaKnown RBP11.72□□□□□ -0.53
HERC4-207ENST00000460168 BMP15O95972 392 aa11.72□□□□□ -0.53
HERC4-207ENST00000460168 STAT2P52630 851 aa11.72□□□□□ -0.53
HERC4-207ENST00000460168 SARNPP82979 210 aaKnown RBP11.72□□□□□ -0.53
HERC4-207ENST00000460168 CCDC84Q86UT8 332 aaPredicted RBP11.72□□□□□ -0.53
HERC4-207ENST00000460168 PCDHA6Q9UN73 950 aa11.72□□□□□ -0.53
HERC4-207ENST00000460168 PCDHA8Q9Y5H6 950 aa11.72□□□□□ -0.53
HERC4-207ENST00000460168 ESYT2A0FGR8 921 aa11.72□□□□□ -0.53
HERC4-207ENST00000460168 M0R2N6 131 aa11.72□□□□□ -0.53
HERC4-207ENST00000460168 CUTAO60888 179 aa11.72□□□□□ -0.53
HERC4-207ENST00000460168 CMA1P23946 247 aa11.72□□□□□ -0.53
HERC4-207ENST00000460168 NDUFA8P51970 172 aa11.72□□□□□ -0.53
HERC4-207ENST00000460168 RAD51AP2Q09MP3 1159 aa11.72□□□□□ -0.53
HERC4-207ENST00000460168 ZNF174Q15697 407 aa11.72□□□□□ -0.53
HERC4-207ENST00000460168 CDC37Q16543 378 aaPredicted RBP11.72□□□□□ -0.53
HERC4-207ENST00000460168 MAP3K11Q16584 847 aa11.72□□□□□ -0.53
HERC4-207ENST00000460168 ZNF280DQ6N043 979 aa11.72□□□□□ -0.53
HERC4-207ENST00000460168 RPAINQ86UA6 219 aa11.72□□□□□ -0.53
HERC4-207ENST00000460168 REXO1Q8N1G1 1221 aaKnown RBP11.72□□□□□ -0.53
HERC4-207ENST00000460168 MTMR8Q96EF0 704 aa11.72□□□□□ -0.53
HERC4-207ENST00000460168 CLIC6Q96NY7 704 aa11.72□□□□□ -0.53
HERC4-207ENST00000460168 ZNF341Q9BYN7 854 aa11.72□□□□□ -0.53
HERC4-207ENST00000460168 CLSTN2Q9H4D0 955 aa11.72□□□□□ -0.53
HERC4-207ENST00000460168 VCPKMTQ9H867 229 aa11.72□□□□□ -0.53
HERC4-207ENST00000460168 SPDYE4A6NLX3 237 aa11.71□□□□□ -0.53
HERC4-207ENST00000460168 PPP1R11O60927 126 aaPredicted RBP11.71□□□□□ -0.53
HERC4-207ENST00000460168 TNNT1P13805 278 aa11.71□□□□□ -0.53
HERC4-207ENST00000460168 CASQ1P31415 396 aa11.71□□□□□ -0.53
HERC4-207ENST00000460168 MCM7P33993 719 aa11.71□□□□□ -0.53
HERC4-207ENST00000460168 ADCY7P51828 1080 aa11.71□□□□□ -0.53
HERC4-207ENST00000460168 SNW1Q13573 536 aaKnown RBP11.71□□□□□ -0.53
HERC4-207ENST00000460168 QRICH1Q2TAL8 776 aa11.71□□□□□ -0.53
HERC4-207ENST00000460168 SYDE2Q5VT97 1194 aa11.71□□□□□ -0.53
HERC4-207ENST00000460168 PPP1R18Q6NYC8 613 aa11.71□□□□□ -0.53
HERC4-207ENST00000460168 PDCL2Q8N4E4 241 aa11.71□□□□□ -0.53
HERC4-207ENST00000460168 GLIS2Q9BZE0 524 aaPredicted RBP11.71□□□□□ -0.53
HERC4-207ENST00000460168 PPP2R3BQ9Y5P8 575 aa11.71□□□□□ -0.53
HERC4-207ENST00000460168 WNT7AO00755 349 aa11.71□□□□□ -0.54
HERC4-207ENST00000460168 PFKFB1P16118 471 aa11.71□□□□□ -0.54
HERC4-207ENST00000460168 PTPREP23469 700 aa11.71□□□□□ -0.54
HERC4-207ENST00000460168 INPP5BP32019 993 aa11.71□□□□□ -0.54
HERC4-207ENST00000460168 INHBEP58166 350 aa11.71□□□□□ -0.54
HERC4-207ENST00000460168 INF2Q27J81 1249 aa11.71□□□□□ -0.54
HERC4-207ENST00000460168 KIAA1755Q5JYT7 1200 aa11.71□□□□□ -0.54
HERC4-207ENST00000460168 FAM83BQ5T0W9 1011 aa11.71□□□□□ -0.54
HERC4-207ENST00000460168 KRT25Q7Z3Z0 450 aa11.71□□□□□ -0.54
HERC4-207ENST00000460168 CKAP2LQ8IYA6 745 aa11.71□□□□□ -0.54
HERC4-207ENST00000460168 ENGASEQ8NFI3 743 aa11.71□□□□□ -0.54
HERC4-207ENST00000460168 WRNIP1Q96S55 665 aa11.71□□□□□ -0.54
HERC4-207ENST00000460168 TSPY26PQ9H489 355 aa11.71□□□□□ -0.54
HERC4-207ENST00000460168 BIN2Q9UBW5 565 aaPredicted RBP11.71□□□□□ -0.54
HERC4-207ENST00000460168 PCDHA1Q9Y5I3 950 aa11.71□□□□□ -0.54
HERC4-207ENST00000460168 NONOQ15233 471 aaKnown RBP eCLIP11.7□□□□□ -0.54
HERC4-207ENST00000460168 ZSCAN26Q16670 478 aa11.7□□□□□ -0.54
HERC4-207ENST00000460168 SHC4Q6S5L8 630 aa11.7□□□□□ -0.54
HERC4-207ENST00000460168 FMR1NBQ8N0W7 255 aaPredicted RBP11.7□□□□□ -0.54
HERC4-207ENST00000460168 CUL5Q93034 780 aa11.7□□□□□ -0.54
HERC4-207ENST00000460168 DCPSQ96C86 337 aaKnown RBP11.7□□□□□ -0.54
HERC4-207ENST00000460168 RANBP17Q9H2T7 1088 aaKnown RBP11.7□□□□□ -0.54
HERC4-207ENST00000460168 GINM1Q9NU53 330 aa11.7□□□□□ -0.54
HERC4-207ENST00000460168 FBXO2Q9UK22 296 aaPredicted RBP11.7□□□□□ -0.54
HERC4-207ENST00000460168 SRPRBQ9Y5M8 271 aaKnown RBP11.7□□□□□ -0.54
HERC4-207ENST00000460168 PITPNM2Q9BZ72 1349 aa11.7□□□□□ -0.54
HERC4-207ENST00000460168 SNAP25P60880 206 aa11.7□□□□□ -0.54
HERC4-207ENST00000460168 PTGDRQ13258 359 aa11.7□□□□□ -0.54
HERC4-207ENST00000460168 SUPT20HL1Q3ZLR7 823 aa11.7□□□□□ -0.54
HERC4-207ENST00000460168 SPECC1Q5M775 1068 aa11.7□□□□□ -0.54
HERC4-207ENST00000460168 JAKMIP3Q5VZ66 844 aa11.7□□□□□ -0.54
HERC4-207ENST00000460168 RESP18Q5W5W9 173 aa11.7□□□□□ -0.54
HERC4-207ENST00000460168 BTNL9Q6UXG8 535 aa11.7□□□□□ -0.54
HERC4-207ENST00000460168 KLHL23Q8NBE8 558 aa11.7□□□□□ -0.54
HERC4-207ENST00000460168 SDF4Q9BRK5 362 aa11.7□□□□□ -0.54
HERC4-207ENST00000460168 AMNQ9BXJ7 453 aa11.7□□□□□ -0.54
HERC4-207ENST00000460168 RIC8AQ9NPQ8 531 aa11.7□□□□□ -0.54
HERC4-207ENST00000460168 FZD1Q9UP38 647 aa11.7□□□□□ -0.54
HERC4-207ENST00000460168 ZNF202O95125 648 aa11.69□□□□□ -0.54
HERC4-207ENST00000460168 CCDC192P0DO97 292 aa11.69□□□□□ -0.54
HERC4-207ENST00000460168 POLR2AP24928 1970 aaKnown RBP11.69□□□□□ -0.54
HERC4-207ENST00000460168 ABCD1P33897 745 aa11.69□□□□□ -0.54
HERC4-207ENST00000460168 SYKP43405 635 aa11.69□□□□□ -0.54
HERC4-207ENST00000460168 MRPL12P52815 198 aaKnown RBP11.69□□□□□ -0.54
HERC4-207ENST00000460168 GRIN1Q05586 938 aa11.69□□□□□ -0.54
HERC4-207ENST00000460168 USH1GQ495M9 461 aa11.69□□□□□ -0.54
HERC4-207ENST00000460168 GET4Q7L5D6 327 aaPredicted RBP11.69□□□□□ -0.54
HERC4-207ENST00000460168 IFNLR1Q8IU57 520 aaPredicted RBP11.69□□□□□ -0.54
HERC4-207ENST00000460168 SULF1Q8IWU6 871 aa11.69□□□□□ -0.54
HERC4-207ENST00000460168 CHURC1Q8WUH1 139 aa11.69□□□□□ -0.54
HERC4-207ENST00000460168 ZKSCAN4Q969J2 545 aaPredicted RBP11.69□□□□□ -0.54
HERC4-207ENST00000460168 FERMT2Q96AC1 680 aa11.69□□□□□ -0.54
HERC4-207ENST00000460168 PSTPIP2Q9H939 334 aa11.69□□□□□ -0.54
HERC4-207ENST00000460168 PICK1Q9NRD5 415 aa11.69□□□□□ -0.54
HERC4-207ENST00000460168 PRR12Q9ULL5 1215 aa11.69□□□□□ -0.54
HERC4-207ENST00000460168 GRIN3BO60391 1043 aa11.68□□□□□ -0.54
HERC4-207ENST00000460168 ATP2C1P98194 919 aaPredicted RBP11.68□□□□□ -0.54
HERC4-207ENST00000460168 PPP2R5AQ15172 486 aa11.68□□□□□ -0.54
HERC4-207ENST00000460168 APBB1IPQ7Z5R6 666 aaPredicted RBP11.68□□□□□ -0.54
HERC4-207ENST00000460168 FBXO11Q86XK2 927 aa11.68□□□□□ -0.54
HERC4-207ENST00000460168 SCYL3Q8IZE3 742 aa11.68□□□□□ -0.54
HERC4-207ENST00000460168 TBCKQ8TEA7 893 aa11.68□□□□□ -0.54
HERC4-207ENST00000460168 KIFC2Q96AC6 838 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms