RNA–Protein interactions for RNA: ENST00000459990.5

SYN3-205, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-205ENST00000459990 RRP12Q5JTH9 1297 aaKnown RBP11.59□□□□□ -0.55
SYN3-205ENST00000459990 SYDE2Q5VT97 1194 aa11.59□□□□□ -0.55
SYN3-205ENST00000459990 PPP1R13LQ8WUF5 828 aa11.59□□□□□ -0.55
SYN3-205ENST00000459990 DCAF4Q8WV16 495 aa11.59□□□□□ -0.55
SYN3-205ENST00000459990 VTI1AQ96AJ9 217 aa11.59□□□□□ -0.55
SYN3-205ENST00000459990 TRPV6Q9H1D0 765 aa11.59□□□□□ -0.55
SYN3-205ENST00000459990 HELLSQ9NRZ9 838 aa11.59□□□□□ -0.55
SYN3-205ENST00000459990 SNHG28P0DPA3 235 aa11.58□□□□□ -0.56
SYN3-205ENST00000459990 CCL23P55773 120 aa11.58□□□□□ -0.56
SYN3-205ENST00000459990 HDAC1Q13547 482 aaPredicted RBP11.58□□□□□ -0.56
SYN3-205ENST00000459990 MCMDC2Q4G0Z9 681 aa11.58□□□□□ -0.56
SYN3-205ENST00000459990 NOL8Q76FK4 1167 aaKnown RBP11.58□□□□□ -0.56
SYN3-205ENST00000459990 NOC4LQ9BVI4 516 aaKnown RBP11.58□□□□□ -0.56
SYN3-205ENST00000459990 LNPKQ9C0E8 428 aa11.58□□□□□ -0.56
SYN3-205ENST00000459990 CPVLQ9H3G5 476 aa11.58□□□□□ -0.56
SYN3-205ENST00000459990 HIPK3Q9H422 1215 aa11.58□□□□□ -0.56
SYN3-205ENST00000459990 VTA1Q9NP79 307 aa11.58□□□□□ -0.56
SYN3-205ENST00000459990 GPCPD1Q9NPB8 672 aa11.58□□□□□ -0.56
SYN3-205ENST00000459990 IL23AQ9NPF7 189 aa11.58□□□□□ -0.56
SYN3-205ENST00000459990 YBX2Q9Y2T7 364 aaKnown RBP11.58□□□□□ -0.56
SYN3-205ENST00000459990 CCDC171Q6TFL3 1326 aa11.58□□□□□ -0.56
SYN3-205ENST00000459990 TRIP12Q14669 1992 aaPredicted RBP11.58□□□□□ -0.56
SYN3-205ENST00000459990 TLR3O15455 904 aaKnown RBP11.57□□□□□ -0.56
SYN3-205ENST00000459990 TOP1P11387 765 aaKnown RBP11.57□□□□□ -0.56
SYN3-205ENST00000459990 EDNRBP24530 442 aa11.57□□□□□ -0.56
SYN3-205ENST00000459990 ZNF543Q08ER8 600 aa11.57□□□□□ -0.56
SYN3-205ENST00000459990 ADGRE1Q14246 886 aa11.57□□□□□ -0.56
SYN3-205ENST00000459990 PPP4R3BQ5MIZ7 849 aa11.57□□□□□ -0.56
SYN3-205ENST00000459990 PSRC1Q6PGN9 363 aaPredicted RBP11.57□□□□□ -0.56
SYN3-205ENST00000459990 KIAA1211Q6ZU35 1233 aa11.57□□□□□ -0.56
SYN3-205ENST00000459990 TMEM199Q8N511 208 aa11.57□□□□□ -0.56
SYN3-205ENST00000459990 HERVK_113Q902F9 699 aa11.57□□□□□ -0.56
SYN3-205ENST00000459990 SCLYQ96I15 445 aa11.57□□□□□ -0.56
SYN3-205ENST00000459990 PRDM12Q9H4Q4 367 aa11.57□□□□□ -0.56
SYN3-205ENST00000459990 TOMM22Q9NS69 142 aa11.57□□□□□ -0.56
SYN3-205ENST00000459990 TCP11L1Q9NUJ3 509 aa11.57□□□□□ -0.56
SYN3-205ENST00000459990 TRMT13Q9NUP7 481 aaKnown RBP11.57□□□□□ -0.56
SYN3-205ENST00000459990 RBM47A0AV96 593 aaKnown RBP11.56□□□□□ -0.56
SYN3-205ENST00000459990 PTPDC1A2A3K4 754 aa11.56□□□□□ -0.56
SYN3-205ENST00000459990 ARIH2O95376 493 aa11.56□□□□□ -0.56
SYN3-205ENST00000459990 GOLGA8HP0CJ92 632 aa11.56□□□□□ -0.56
SYN3-205ENST00000459990 PURAQ00577 322 aaKnown RBP11.56□□□□□ -0.56
SYN3-205ENST00000459990 DUSP28Q4G0W2 176 aa11.56□□□□□ -0.56
SYN3-205ENST00000459990 IQSEC1Q6DN90 963 aa11.56□□□□□ -0.56
SYN3-205ENST00000459990 OTOP2Q7RTS6 562 aa11.56□□□□□ -0.56
SYN3-205ENST00000459990 COPS5Q92905 334 aa11.56□□□□□ -0.56
SYN3-205ENST00000459990 ZKSCAN3Q9BRR0 538 aa11.56□□□□□ -0.56
SYN3-205ENST00000459990 AP5M1Q9H0R1 490 aa11.56□□□□□ -0.56
SYN3-205ENST00000459990 IL25Q9H293 177 aa11.56□□□□□ -0.56
SYN3-205ENST00000459990 ALDH8A1Q9H2A2 487 aaPredicted RBP11.56□□□□□ -0.56
SYN3-205ENST00000459990 NKX2-4Q9H2Z4 354 aa11.56□□□□□ -0.56
SYN3-205ENST00000459990 Q9Y3F1 56 aa11.56□□□□□ -0.56
SYN3-205ENST00000459990 MYH7BA7E2Y1 1941 aa11.56□□□□□ -0.56
SYN3-205ENST00000459990 CABYRO75952 493 aa11.55□□□□□ -0.56
SYN3-205ENST00000459990 CYP2C9P11712 490 aa11.55□□□□□ -0.56
SYN3-205ENST00000459990 MYOGP15173 224 aa11.55□□□□□ -0.56
SYN3-205ENST00000459990 CALML3P27482 149 aa11.55□□□□□ -0.56
SYN3-205ENST00000459990 RABGGTBP53611 331 aa11.55□□□□□ -0.56
SYN3-205ENST00000459990 RPS6P62753 249 aaKnown RBP11.55□□□□□ -0.56
SYN3-205ENST00000459990 AKNAD1Q5T1N1 836 aa11.55□□□□□ -0.56
SYN3-205ENST00000459990 WDR11Q9BZH6 1224 aa11.55□□□□□ -0.56
SYN3-205ENST00000459990 WDR19Q8NEZ3 1342 aa11.55□□□□□ -0.56
SYN3-205ENST00000459990 DOCK5Q9H7D0 1870 aa11.55□□□□□ -0.56
SYN3-205ENST00000459990 IGHDP01880 384 aa11.54□□□□□ -0.56
SYN3-205ENST00000459990 RNF207Q6ZRF8 634 aa11.54□□□□□ -0.56
SYN3-205ENST00000459990 SMC5Q8IY18 1101 aa11.54□□□□□ -0.56
SYN3-205ENST00000459990 OR6J1Q8NGC5 347 aa11.54□□□□□ -0.56
SYN3-205ENST00000459990 TBC1D5Q92609 795 aa11.54□□□□□ -0.56
SYN3-205ENST00000459990 RILPL2Q969X0 211 aa11.54□□□□□ -0.56
SYN3-205ENST00000459990 COL20A1Q9P218 1284 aa11.54□□□□□ -0.56
SYN3-205ENST00000459990 TNKSO95271 1327 aa11.54□□□□□ -0.56
SYN3-205ENST00000459990 TRIM6-TRIM34B2RNG4 842 aa11.53□□□□□ -0.56
SYN3-205ENST00000459990 ARHGEF15O94989 841 aa11.53□□□□□ -0.56
SYN3-205ENST00000459990 FGBP02675 491 aa11.53□□□□□ -0.56
SYN3-205ENST00000459990 MYL3P08590 195 aa11.53□□□□□ -0.56
SYN3-205ENST00000459990 SDSP20132 328 aa11.53□□□□□ -0.56
SYN3-205ENST00000459990 TTLL4Q14679 1199 aa11.53□□□□□ -0.56
SYN3-205ENST00000459990 USH1GQ495M9 461 aa11.53□□□□□ -0.56
SYN3-205ENST00000459990 B4GALNT3Q6L9W6 998 aa11.53□□□□□ -0.56
SYN3-205ENST00000459990 PLEKHM2Q8IWE5 1019 aa11.53□□□□□ -0.56
SYN3-205ENST00000459990 PPM1EQ8WY54 764 aa11.53□□□□□ -0.56
SYN3-205ENST00000459990 CTAGE1Q96RT6 745 aa11.53□□□□□ -0.56
SYN3-205ENST00000459990 UBA5Q9GZZ9 404 aa11.53□□□□□ -0.56
SYN3-205ENST00000459990 ADD3Q9UEY8 706 aaKnown RBP11.53□□□□□ -0.56
SYN3-205ENST00000459990 TCF20Q9UGU0 1960 aaKnown RBP11.53□□□□□ -0.56
SYN3-205ENST00000459990 LOC102724159A0A0B4J2E5 919 aa11.52□□□□□ -0.57
SYN3-205ENST00000459990 ZEB2O60315 1214 aa11.52□□□□□ -0.57
SYN3-205ENST00000459990 PPP2R5BQ15173 497 aa11.52□□□□□ -0.57
SYN3-205ENST00000459990 PWP2Q15269 919 aaKnown RBP11.52□□□□□ -0.57
SYN3-205ENST00000459990 CDC37Q16543 378 aaPredicted RBP11.52□□□□□ -0.57
SYN3-205ENST00000459990 NBPF20Q3BBV1 942 aa11.52□□□□□ -0.57
SYN3-205ENST00000459990 MFSD6Q6ZSS7 791 aa11.52□□□□□ -0.57
SYN3-205ENST00000459990 PRRC2BQ5JSZ5 2229 aaKnown RBP11.51□□□□□ -0.57
SYN3-205ENST00000459990 BDP1A6H8Y1 2624 aa11.51□□□□□ -0.57
SYN3-205ENST00000459990 EPOPA6NHQ4 379 aa11.51□□□□□ -0.57
SYN3-205ENST00000459990 A6NJR5 290 aa11.51□□□□□ -0.57
SYN3-205ENST00000459990 B4E1Z4 1266 aa11.51□□□□□ -0.57
SYN3-205ENST00000459990 OPLAHO14841 1288 aa11.51□□□□□ -0.57
SYN3-205ENST00000459990 KDM4AO75164 1064 aa11.51□□□□□ -0.57
SYN3-205ENST00000459990 CPT1AP50416 773 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms