RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 BICDL1Q6ZP65 573 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 PIK3AP1Q6ZUJ8 805 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 C15orf52Q6ZUT6 534 aaKnown RBP6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 KRT25Q7Z3Z0 450 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 ZSCAN29Q8IWY8 852 aaPredicted RBP6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 CMTR1Q8N1G2 835 aaKnown RBP6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 CCDC155Q8N6L0 562 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 ZNF384Q8TF68 577 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 CPLX3Q8WVH0 158 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 RPGRQ92834 1020 aaKnown RBP6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 SPZ1Q9BXG8 430 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 TTYH3Q9C0H2 523 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 LRRC27Q9C0I9 530 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 VPS16Q9H269 839 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 KAT14Q9H8E8 782 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 ZNF287Q9HBT7 754 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 ST7Q9NRC1 585 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 EXOC1Q9NV70 894 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 BARHL2Q9NY43 387 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 MKRN1Q9UHC7 482 aaKnown RBP6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 SAR1BQ9Y6B6 198 aa6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 GOLGB1Q14789 3259 aaKnown RBP6.86□□□□□ -1.31
UBQLN4-202ENST00000459954 IRS2Q9Y4H2 1338 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 PVALEFA0A1B0GWK0 134 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 TTC26A0AVF1 554 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 ESYT2A0FGR8 921 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 PALM3A6NDB9 673 aaPredicted RBP6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 TSPY2A6NKD2 308 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 SNAP23O00161 211 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 WNT7AO00755 349 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 POLR3GO15318 223 aaPredicted RBP6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 PRDM1O75626 825 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 IPO7O95373 1038 aaKnown RBP6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 LDHCP07864 332 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 HIBADHP31937 336 aaKnown RBP6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 MCM7P33993 719 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 CCT6AP40227 531 aaKnown RBP6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 UBA7P41226 1012 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 GYG1P46976 350 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 RPS8P62241 208 aaKnown RBP6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 DYNLL1P63167 89 aaKnown RBP6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 MECOMQ03112 1051 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 CASP8Q14790 479 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 TMEM132AQ24JP5 1023 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 NAALADL2Q58DX5 795 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 HSP90B2PQ58FF3 399 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 C12orf60Q5U649 245 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 C2CD5Q86YS7 1000 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 AMOTL1Q8IY63 956 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 PNMA1Q8ND90 353 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 ACRBPQ8NEB7 543 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 WDR66Q8TBY9 1149 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 P2RX5Q93086 422 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 TUBGCP2Q9BSJ2 902 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 IRX2Q9BZI1 471 aaPredicted RBP6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 ZMYND12Q9H0C1 365 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 ABCB6Q9NP58 842 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 TAB2Q9NYJ8 693 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 STK17AQ9UEE5 414 aa6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 REXO2Q9Y3B8 237 aaKnown RBP6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 GREB1LQ9C091 1923 aaPredicted RBP6.85□□□□□ -1.31
UBQLN4-202ENST00000459954 NRXN2Q9P2S2 1712 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 LTBP3Q9NS15 1303 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 H3BQF6 201 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 RNF225M0QZC1 329 aaPredicted RBP6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 PJA2O43164 708 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 USO1O60763 962 aaKnown RBP6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 DPEP1P16444 411 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 KCNA3P22001 575 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 GNA11P29992 359 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 NOVP48745 357 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 HERVK_113P62684 666 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 VSNL1P62760 191 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 C1QBPQ07021 282 aaKnown RBP6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 PSMD2Q13200 908 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 PDIA5Q14554 519 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 SEPT2Q15019 361 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 ZSCAN26Q16670 478 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 PTPN21Q16825 1174 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 CENPPQ6IPU0 288 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 CCDC70Q6NSX1 233 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 WDR59Q6PJI9 974 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 LEKR1Q6ZMV7 388 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 SMIM5Q71RC9 77 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 CCDC84Q86UT8 332 aaPredicted RBP6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 SMYD4Q8IYR2 804 aaPredicted RBP6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 MMGT1Q8N4V1 131 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 SUPT20HQ8NEM7 779 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 TRIM58Q8NG06 486 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 PNKPQ96T60 521 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 CHP1Q99653 195 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 DUSP9Q99956 384 aaKnown RBP6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 SLF1Q9BQI6 1058 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 NUCKS1Q9H1E3 243 aaKnown RBP6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 BLZF1Q9H2G9 400 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 RNF14Q9UBS8 474 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 PUF60Q9UHX1 559 aaKnown RBP6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 MAD2L2Q9UI95 211 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 PCDHA6Q9UN73 950 aa6.84□□□□□ -1.31
UBQLN4-202ENST00000459954 PLAGL2Q9UPG8 496 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms