RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 TCIRG1Q13488 830 aa21.48■■□□□ 1.03
SNX27-204ENST00000458013 CCDC84Q86UT8 332 aaPredicted RBP21.48■■□□□ 1.03
SNX27-204ENST00000458013 GLT8D2Q9H1C3 349 aa21.48■■□□□ 1.03
SNX27-204ENST00000458013 SUDS3Q9H7L9 328 aaPredicted RBP21.48■■□□□ 1.03
SNX27-204ENST00000458013 HMGXB3Q12766 1538 aa21.48■■□□□ 1.03
SNX27-204ENST00000458013 CHL1O00533 1208 aa21.48■■□□□ 1.03
SNX27-204ENST00000458013 CHRNDQ07001 517 aa21.48■■□□□ 1.03
SNX27-204ENST00000458013 KRT3P12035 628 aa21.47■■□□□ 1.03
SNX27-204ENST00000458013 ATP5JP18859 108 aa21.47■■□□□ 1.03
SNX27-204ENST00000458013 PABPC4Q13310 644 aaKnown RBP eCLIP21.47■■□□□ 1.03
SNX27-204ENST00000458013 PI4K2BQ8TCG2 481 aa21.47■■□□□ 1.03
SNX27-204ENST00000458013 FAM193BQ96PV7 902 aaPredicted RBP21.47■■□□□ 1.03
SNX27-204ENST00000458013 DNAJC17Q9NVM6 304 aaKnown RBP21.47■■□□□ 1.03
SNX27-204ENST00000458013 FGAP02671 866 aa21.47■■□□□ 1.03
SNX27-204ENST00000458013 CERS3Q8IU89 383 aa21.47■■□□□ 1.03
SNX27-204ENST00000458013 MORC4Q8TE76 937 aa21.47■■□□□ 1.03
SNX27-204ENST00000458013 PALM3A6NDB9 673 aaPredicted RBP21.47■■□□□ 1.03
SNX27-204ENST00000458013 TMEM191BP0C7N4 346 aa21.47■■□□□ 1.03
SNX27-204ENST00000458013 ATP8A2Q9NTI2 1148 aa21.47■■□□□ 1.03
SNX27-204ENST00000458013 CCPG1Q9ULG6 757 aa21.47■■□□□ 1.03
SNX27-204ENST00000458013 SCG2P13521 617 aa21.47■■□□□ 1.03
SNX27-204ENST00000458013 ZBTB8OSQ8IWT0 167 aa21.47■■□□□ 1.03
SNX27-204ENST00000458013 MTMR6Q9Y217 621 aa21.47■■□□□ 1.03
SNX27-204ENST00000458013 EEF1GP26641 437 aaKnown RBP21.47■■□□□ 1.03
SNX27-204ENST00000458013 LRRC8CQ8TDW0 803 aa21.47■■□□□ 1.03
SNX27-204ENST00000458013 IFT122Q9HBG6 1241 aa21.47■■□□□ 1.03
SNX27-204ENST00000458013 GDF11O95390 407 aa21.46■■□□□ 1.03
SNX27-204ENST00000458013 SLC7A5Q01650 507 aa21.46■■□□□ 1.03
SNX27-204ENST00000458013 GABPB1Q06547 395 aaPredicted RBP21.46■■□□□ 1.03
SNX27-204ENST00000458013 E2F5Q15329 346 aa21.46■■□□□ 1.03
SNX27-204ENST00000458013 EAF2Q96CJ1 260 aaPredicted RBP21.46■■□□□ 1.03
SNX27-204ENST00000458013 THOC1Q96FV9 657 aaKnown RBP21.46■■□□□ 1.03
SNX27-204ENST00000458013 FTCDO95954 541 aa21.46■■□□□ 1.03
SNX27-204ENST00000458013 MAP2K2P36507 400 aa21.46■■□□□ 1.03
SNX27-204ENST00000458013 CCDC93Q567U6 631 aa21.46■■□□□ 1.03
SNX27-204ENST00000458013 STAG1Q8WVM7 1258 aa21.46■■□□□ 1.03
SNX27-204ENST00000458013 GREM2Q9H772 168 aa21.46■■□□□ 1.03
SNX27-204ENST00000458013 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.46■■□□□ 1.03
SNX27-204ENST00000458013 AKT3Q9Y243 479 aa21.46■■□□□ 1.03
SNX27-204ENST00000458013 UHRF1BP1Q6BDS2 1440 aa21.46■■□□□ 1.03
SNX27-204ENST00000458013 GOLGA8SH3BPF8 625 aa21.46■■□□□ 1.03
SNX27-204ENST00000458013 PPFIA4O75335 1185 aa21.46■■□□□ 1.03
SNX27-204ENST00000458013 PDE6AP16499 860 aa21.46■■□□□ 1.03
SNX27-204ENST00000458013 CDC25AP30304 524 aa21.46■■□□□ 1.03
SNX27-204ENST00000458013 COPB1P53618 953 aaKnown RBP21.46■■□□□ 1.03
SNX27-204ENST00000458013 YWHAEP62258 255 aaKnown RBP21.46■■□□□ 1.03
SNX27-204ENST00000458013 C11orf57Q6ZUT1 292 aaPredicted RBP21.46■■□□□ 1.03
SNX27-204ENST00000458013 LRGUKQ96M69 825 aa21.46■■□□□ 1.03
SNX27-204ENST00000458013 XAB2Q9HCS7 855 aaKnown RBP21.46■■□□□ 1.03
SNX27-204ENST00000458013 HAUS1Q96CS2 278 aa21.45■■□□□ 1.02
SNX27-204ENST00000458013 CSADQ9Y600 493 aa21.45■■□□□ 1.02
SNX27-204ENST00000458013 TTC30BQ8N4P2 665 aa21.45■■□□□ 1.02
SNX27-204ENST00000458013 ACRBPQ8NEB7 543 aa21.45■■□□□ 1.02
SNX27-204ENST00000458013 A6NJR5 290 aa21.45■■□□□ 1.02
SNX27-204ENST00000458013 SOWAHDA6NJG2 315 aa21.45■■□□□ 1.02
SNX27-204ENST00000458013 IFT88Q13099 833 aa21.45■■□□□ 1.02
SNX27-204ENST00000458013 USP21Q9UK80 565 aa21.45■■□□□ 1.02
SNX27-204ENST00000458013 CFAP65Q6ZU64 1925 aaKnown RBP21.44■■□□□ 1.02
SNX27-204ENST00000458013 EEPD1Q7L9B9 569 aa21.44■■□□□ 1.02
SNX27-204ENST00000458013 NUCKS1Q9H1E3 243 aaKnown RBP21.44■■□□□ 1.02
SNX27-204ENST00000458013 PHKA1P46020 1223 aa21.44■■□□□ 1.02
SNX27-204ENST00000458013 ICA1Q05084 483 aa21.44■■□□□ 1.02
SNX27-204ENST00000458013 CYP4F22Q6NT55 531 aa21.44■■□□□ 1.02
SNX27-204ENST00000458013 ARHGAP27Q6ZUM4 889 aa21.44■■□□□ 1.02
SNX27-204ENST00000458013 MED23Q9ULK4 1368 aa21.44■■□□□ 1.02
SNX27-204ENST00000458013 PFKFB2O60825 505 aa21.44■■□□□ 1.02
SNX27-204ENST00000458013 PDIA3P30101 505 aaKnown RBP21.44■■□□□ 1.02
SNX27-204ENST00000458013 SLFN12Q8IYM2 578 aa21.44■■□□□ 1.02
SNX27-204ENST00000458013 PARD3BQ8TEW8 1205 aa21.44■■□□□ 1.02
SNX27-204ENST00000458013 TSPYL2Q9H2G4 693 aaPredicted RBP21.44■■□□□ 1.02
SNX27-204ENST00000458013 FAM182BQ5T319 152 aa21.44■■□□□ 1.02
SNX27-204ENST00000458013 SCARA5Q6ZMJ2 495 aa21.44■■□□□ 1.02
SNX27-204ENST00000458013 GNPTABQ3T906 1256 aa21.44■■□□□ 1.02
SNX27-204ENST00000458013 FAM133AQ8N9E0 248 aa21.44■■□□□ 1.02
SNX27-204ENST00000458013 PRAMEF22A3QJZ6 481 aa21.43■■□□□ 1.02
SNX27-204ENST00000458013 SPDYE2BA6NHP3 402 aa21.43■■□□□ 1.02
SNX27-204ENST00000458013 SPDYE6P0CI01 402 aa21.43■■□□□ 1.02
SNX27-204ENST00000458013 ACTN1P12814 892 aa21.43■■□□□ 1.02
SNX27-204ENST00000458013 NKX1-1Q15270 411 aaPredicted RBP21.43■■□□□ 1.02
SNX27-204ENST00000458013 RINT1Q6NUQ1 792 aa21.43■■□□□ 1.02
SNX27-204ENST00000458013 EXOC3L4Q17RC7 722 aa21.43■■□□□ 1.02
SNX27-204ENST00000458013 EPB41L5Q9HCM4 733 aa21.43■■□□□ 1.02
SNX27-204ENST00000458013 RPS8P62241 208 aaKnown RBP21.43■■□□□ 1.02
SNX27-204ENST00000458013 PPP4R4Q6NUP7 873 aa21.43■■□□□ 1.02
SNX27-204ENST00000458013 ATP8A1Q9Y2Q0 1164 aa21.43■■□□□ 1.02
SNX27-204ENST00000458013 IRX4P78413 519 aa21.43■■□□□ 1.02
SNX27-204ENST00000458013 NUP160Q12769 1436 aa21.43■■□□□ 1.02
SNX27-204ENST00000458013 UNC5CLQ8IV45 518 aa21.43■■□□□ 1.02
SNX27-204ENST00000458013 CCNYQ8ND76 341 aa21.43■■□□□ 1.02
SNX27-204ENST00000458013 ZNF274Q96GC6 653 aaPredicted RBP21.43■■□□□ 1.02
SNX27-204ENST00000458013 TRPA1O75762 1119 aa21.42■■□□□ 1.02
SNX27-204ENST00000458013 ODR4Q5SWX8 454 aa21.42■■□□□ 1.02
SNX27-204ENST00000458013 ATP10BO94823 1461 aa21.42■■□□□ 1.02
SNX27-204ENST00000458013 CHURC1Q8WUH1 139 aa21.42■■□□□ 1.02
SNX27-204ENST00000458013 ALKBH8Q96BT7 664 aaKnown RBP21.42■■□□□ 1.02
SNX27-204ENST00000458013 GPR101Q96P66 508 aaPredicted RBP21.42■■□□□ 1.02
SNX27-204ENST00000458013 OLA1Q9NTK5 396 aaKnown RBP21.42■■□□□ 1.02
SNX27-204ENST00000458013 NUB1Q9Y5A7 615 aa21.42■■□□□ 1.02
SNX27-204ENST00000458013 F5H423 210 aaPredicted RBP21.42■■□□□ 1.02
SNX27-204ENST00000458013 H7C1D1 291 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms