RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 FBXO11Q86XK2 927 aa10□□□□□ -0.81
RIF1-208ENST00000457745 FBXO22Q8NEZ5 403 aa10□□□□□ -0.81
RIF1-208ENST00000457745 ENGASEQ8NFI3 743 aa10□□□□□ -0.81
RIF1-208ENST00000457745 MS4A4AQ96JQ5 239 aa10□□□□□ -0.81
RIF1-208ENST00000457745 SLF1Q9BQI6 1058 aa10□□□□□ -0.81
RIF1-208ENST00000457745 TANGO6Q9C0B7 1094 aa10□□□□□ -0.81
RIF1-208ENST00000457745 FEM1BQ9UK73 627 aa10□□□□□ -0.81
RIF1-208ENST00000457745 PPP1R9AQ9ULJ8 1098 aa10□□□□□ -0.81
RIF1-208ENST00000457745 A0A1B0GVL5 298 aa9.99□□□□□ -0.81
RIF1-208ENST00000457745 SPDYE16A6NNV3 312 aaPredicted RBP9.99□□□□□ -0.81
RIF1-208ENST00000457745 CNMDO75829 334 aa9.99□□□□□ -0.81
RIF1-208ENST00000457745 FLOT1O75955 427 aa9.99□□□□□ -0.81
RIF1-208ENST00000457745 PDIA4P13667 645 aaKnown RBP9.99□□□□□ -0.81
RIF1-208ENST00000457745 CALML3P27482 149 aa9.99□□□□□ -0.81
RIF1-208ENST00000457745 MCM7P33993 719 aa9.99□□□□□ -0.81
RIF1-208ENST00000457745 SNW1Q13573 536 aaKnown RBP9.99□□□□□ -0.81
RIF1-208ENST00000457745 TTLL12Q14166 644 aaPredicted RBP9.99□□□□□ -0.81
RIF1-208ENST00000457745 GPAT2Q6NUI2 795 aa9.99□□□□□ -0.81
RIF1-208ENST00000457745 PPP1R18Q6NYC8 613 aa9.99□□□□□ -0.81
RIF1-208ENST00000457745 CATSPERGQ6ZRH7 1159 aa9.99□□□□□ -0.81
RIF1-208ENST00000457745 CCAR1Q8IX12 1150 aaKnown RBP9.99□□□□□ -0.81
RIF1-208ENST00000457745 FSIP1Q8NA03 581 aa9.99□□□□□ -0.81
RIF1-208ENST00000457745 CCDC148Q8NFR7 591 aa9.99□□□□□ -0.81
RIF1-208ENST00000457745 TBCKQ8TEA7 893 aa9.99□□□□□ -0.81
RIF1-208ENST00000457745 CRYGNQ8WXF5 182 aa9.99□□□□□ -0.81
RIF1-208ENST00000457745 LPAR1Q92633 364 aa9.99□□□□□ -0.81
RIF1-208ENST00000457745 ERCC4Q92889 916 aaPredicted RBP9.99□□□□□ -0.81
RIF1-208ENST00000457745 OPTNQ96CV9 577 aa9.99□□□□□ -0.81
RIF1-208ENST00000457745 HOOK2Q96ED9 719 aa9.99□□□□□ -0.81
RIF1-208ENST00000457745 AMNQ9BXJ7 453 aa9.99□□□□□ -0.81
RIF1-208ENST00000457745 SCAND2PQ9GZW5 306 aaPredicted RBP9.99□□□□□ -0.81
RIF1-208ENST00000457745 SH2D4AQ9H788 454 aa9.99□□□□□ -0.81
RIF1-208ENST00000457745 SLC38A10Q9HBR0 1119 aa9.99□□□□□ -0.81
RIF1-208ENST00000457745 KCNH4Q9UQ05 1017 aa9.99□□□□□ -0.81
RIF1-208ENST00000457745 BOLA1Q9Y3E2 137 aa9.99□□□□□ -0.81
RIF1-208ENST00000457745 A0A0G2JLL6 359 aaPredicted RBP9.98□□□□□ -0.81
RIF1-208ENST00000457745 PP2D1A8MPX8 630 aa9.98□□□□□ -0.81
RIF1-208ENST00000457745 GOLGA6L22H0YM25 854 aa9.98□□□□□ -0.81
RIF1-208ENST00000457745 hCG_1984214I3L0E3 225 aa9.98□□□□□ -0.81
RIF1-208ENST00000457745 VWA5AO00534 786 aa9.98□□□□□ -0.81
RIF1-208ENST00000457745 KIF3CO14782 793 aa9.98□□□□□ -0.81
RIF1-208ENST00000457745 CELF2O95319 508 aaKnown RBP9.98□□□□□ -0.81
RIF1-208ENST00000457745 XBP1P17861 261 aa9.98□□□□□ -0.81
RIF1-208ENST00000457745 PTPREP23469 700 aa9.98□□□□□ -0.81
RIF1-208ENST00000457745 ME1P48163 572 aa9.98□□□□□ -0.81
RIF1-208ENST00000457745 IREB2P48200 963 aaKnown RBP9.98□□□□□ -0.81
RIF1-208ENST00000457745 NDUFA8P51970 172 aa9.98□□□□□ -0.81
RIF1-208ENST00000457745 UBXN2AP68543 259 aa9.98□□□□□ -0.81
RIF1-208ENST00000457745 ATP2C1P98194 919 aaPredicted RBP9.98□□□□□ -0.81
RIF1-208ENST00000457745 PTGDRQ13258 359 aa9.98□□□□□ -0.81
RIF1-208ENST00000457745 TMEM132BQ14DG7 1078 aa9.98□□□□□ -0.81
RIF1-208ENST00000457745 ZSCAN23Q3MJ62 389 aa9.98□□□□□ -0.81
RIF1-208ENST00000457745 RILPL1Q5EBL4 403 aa9.98□□□□□ -0.81
RIF1-208ENST00000457745 PRRT2Q7Z6L0 340 aaPredicted RBP9.98□□□□□ -0.81
RIF1-208ENST00000457745 FAM160B2Q86V87 743 aa9.98□□□□□ -0.81
RIF1-208ENST00000457745 ANKRD13AQ8IZ07 590 aa9.98□□□□□ -0.81
RIF1-208ENST00000457745 FMR1NBQ8N0W7 255 aaPredicted RBP9.98□□□□□ -0.81
RIF1-208ENST00000457745 CPXCR1Q8N123 301 aa9.98□□□□□ -0.81
RIF1-208ENST00000457745 REXO1Q8N1G1 1221 aaKnown RBP9.98□□□□□ -0.81
RIF1-208ENST00000457745 ZNF713Q8N859 430 aaPredicted RBP9.98□□□□□ -0.81
RIF1-208ENST00000457745 IL31RAQ8NI17 732 aa9.98□□□□□ -0.81
RIF1-208ENST00000457745 ANO3Q9BYT9 981 aa9.98□□□□□ -0.81
RIF1-208ENST00000457745 CSRNP2Q9H175 543 aa9.98□□□□□ -0.81
RIF1-208ENST00000457745 PSTPIP2Q9H939 334 aa9.98□□□□□ -0.81
RIF1-208ENST00000457745 AS3MTQ9HBK9 375 aa9.98□□□□□ -0.81
RIF1-208ENST00000457745 C6orf50Q9HD87 102 aa9.98□□□□□ -0.81
RIF1-208ENST00000457745 BTBD7Q9P203 1132 aa9.98□□□□□ -0.81
RIF1-208ENST00000457745 ZNF214Q9UL59 606 aaPredicted RBP9.98□□□□□ -0.81
RIF1-208ENST00000457745 ADAMTS5Q9UNA0 930 aa9.98□□□□□ -0.81
RIF1-208ENST00000457745 HPSEQ9Y251 543 aa9.98□□□□□ -0.81
RIF1-208ENST00000457745 LRRC37A2A6NM11 1700 aa9.97□□□□□ -0.81
RIF1-208ENST00000457745 CCDC194A0A1B0GVG4 234 aa9.97□□□□□ -0.81
RIF1-208ENST00000457745 FOXN1O15353 648 aa9.97□□□□□ -0.81
RIF1-208ENST00000457745 PPP1R12BO60237 982 aaPredicted RBP9.97□□□□□ -0.81
RIF1-208ENST00000457745 ICAM1P05362 532 aa9.97□□□□□ -0.81
RIF1-208ENST00000457745 PFKFB1P16118 471 aa9.97□□□□□ -0.81
RIF1-208ENST00000457745 PPIL2Q13356 520 aa9.97□□□□□ -0.81
RIF1-208ENST00000457745 NONOQ15233 471 aaKnown RBP eCLIP9.97□□□□□ -0.81
RIF1-208ENST00000457745 ATL3Q6DD88 541 aa9.97□□□□□ -0.81
RIF1-208ENST00000457745 GADL1Q6ZQY3 521 aa9.97□□□□□ -0.81
RIF1-208ENST00000457745 KRT25Q7Z3Z0 450 aa9.97□□□□□ -0.81
RIF1-208ENST00000457745 ERO1BQ86YB8 467 aa9.97□□□□□ -0.81
RIF1-208ENST00000457745 CYP2W1Q8TAV3 490 aa9.97□□□□□ -0.81
RIF1-208ENST00000457745 BICD2Q8TD16 824 aa9.97□□□□□ -0.81
RIF1-208ENST00000457745 CHURC1Q8WUH1 139 aa9.97□□□□□ -0.81
RIF1-208ENST00000457745 TXNRD2Q9NNW7 524 aa9.97□□□□□ -0.81
RIF1-208ENST00000457745 HOMER2Q9NSB8 354 aa9.97□□□□□ -0.81
RIF1-208ENST00000457745 DACT1Q9NYF0 836 aa9.97□□□□□ -0.81
RIF1-208ENST00000457745 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.97□□□□□ -0.81
RIF1-208ENST00000457745 CFAP45Q9UL16 551 aa9.97□□□□□ -0.81
RIF1-208ENST00000457745 CSADQ9Y600 493 aa9.97□□□□□ -0.81
RIF1-208ENST00000457745 FAM237AA0A1B0GTK4 181 aa9.96□□□□□ -0.82
RIF1-208ENST00000457745 A0A1W2PQ27 194 aa9.96□□□□□ -0.82
RIF1-208ENST00000457745 A0A1W2PQ64 194 aa9.96□□□□□ -0.82
RIF1-208ENST00000457745 A0A1W2PQD8 194 aa9.96□□□□□ -0.82
RIF1-208ENST00000457745 SYCE3A1L190 88 aa9.96□□□□□ -0.82
RIF1-208ENST00000457745 C19orf81C9J6K1 198 aa9.96□□□□□ -0.82
RIF1-208ENST00000457745 PPP6R2O75170 966 aa9.96□□□□□ -0.82
RIF1-208ENST00000457745 ALAS1P13196 640 aa9.96□□□□□ -0.82
RIF1-208ENST00000457745 CDC25AP30304 524 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms