RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 ZBTB12Q9Y330 459 aaPredicted RBP10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 CD2APQ9Y5K6 639 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 MYO3BQ8WXR4 1341 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 CIAO1O76071 339 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 FAM13AO94988 1023 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 CMA1P23946 247 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 GUCY2DQ02846 1103 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 PABPC4Q13310 644 aaKnown RBP eCLIP10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 SEPT6Q14141 434 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 CCDC105Q8IYK2 499 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 HAUS4Q9H6D7 363 aa10.75□□□□□ -0.69
MSC-AS1-201ENST00000457356 USP27XA6NNY8 438 aa10.74□□□□□ -0.69
MSC-AS1-201ENST00000457356 KCNK3O14649 394 aa10.74□□□□□ -0.69
MSC-AS1-201ENST00000457356 CETN3O15182 167 aa10.74□□□□□ -0.69
MSC-AS1-201ENST00000457356 GBP1P32455 592 aa10.74□□□□□ -0.69
MSC-AS1-201ENST00000457356 SESN3P58005 492 aa10.74□□□□□ -0.69
MSC-AS1-201ENST00000457356 SDCCAG8Q86SQ7 713 aaPredicted RBP10.74□□□□□ -0.69
MSC-AS1-201ENST00000457356 EXOC4Q96A65 974 aa10.74□□□□□ -0.69
MSC-AS1-201ENST00000457356 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.74□□□□□ -0.69
MSC-AS1-201ENST00000457356 ATP1A3P13637 1013 aa10.74□□□□□ -0.69
MSC-AS1-201ENST00000457356 SLC1A4P43007 532 aa10.74□□□□□ -0.69
MSC-AS1-201ENST00000457356 VPS41P49754 854 aa10.74□□□□□ -0.69
MSC-AS1-201ENST00000457356 MRPS25P82663 173 aaKnown RBP10.74□□□□□ -0.69
MSC-AS1-201ENST00000457356 MIGA2Q7L4E1 593 aa10.74□□□□□ -0.69
MSC-AS1-201ENST00000457356 CCDC84Q86UT8 332 aaPredicted RBP10.74□□□□□ -0.69
MSC-AS1-201ENST00000457356 VCXQ9H320 206 aa10.74□□□□□ -0.69
MSC-AS1-201ENST00000457356 GPCPD1Q9NPB8 672 aa10.74□□□□□ -0.69
MSC-AS1-201ENST00000457356 ZNF521Q96K83 1311 aa10.74□□□□□ -0.69
MSC-AS1-201ENST00000457356 EPHA10Q5JZY3 1008 aa10.74□□□□□ -0.69
MSC-AS1-201ENST00000457356 RASIP1Q5U651 963 aa10.74□□□□□ -0.69
MSC-AS1-201ENST00000457356 ANKRD20A3Q5VUR7 823 aa10.74□□□□□ -0.69
MSC-AS1-201ENST00000457356 TRMT2AQ8IZ69 625 aaKnown RBP10.74□□□□□ -0.69
MSC-AS1-201ENST00000457356 NCAPGQ9BPX3 1015 aa10.74□□□□□ -0.69
MSC-AS1-201ENST00000457356 CTTNBP2NLQ9P2B4 639 aa10.74□□□□□ -0.69
MSC-AS1-201ENST00000457356 LCMT1Q9UIC8 334 aa10.74□□□□□ -0.69
MSC-AS1-201ENST00000457356 NRKQ7Z2Y5 1582 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 MYCP01106 439 aaPredicted RBP10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 PDE6AP16499 860 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 RPL13P26373 211 aaKnown RBP10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 STX2P32856 288 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 CACNB3P54284 484 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 CTDSPL2Q05D32 466 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 TMCO4Q5TGY1 634 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 NAA35Q5VZE5 725 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 AP1ARQ63HQ0 302 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 CCDC65Q8IXS2 484 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 MICALL2Q8IY33 904 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 TDRD3Q9H7E2 651 aaKnown RBP10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 TXNDC16Q9P2K2 825 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 ZBTB21Q9ULJ3 1066 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 CDHR2Q9BYE9 1310 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 ROBO1Q9Y6N7 1651 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 CYP2C19P33261 490 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 DDIT3P35638 169 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 PTPN12Q05209 780 aaKnown RBP10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 TRIM58Q8NG06 486 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 STAG1Q8WVM7 1258 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 SLC24A3Q9HC58 644 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 BCL9O00512 1426 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 ATP8B1O43520 1251 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 ATP5JP18859 108 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 ASIC2Q16515 512 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 CERKLQ49MI3 558 aaPredicted RBP10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 HHATQ5VTY9 493 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 CNNM4Q6P4Q7 775 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 SDR42E1Q8WUS8 393 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 TPX2Q9ULW0 747 aaKnown RBP10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 KCNJ18B7U540 433 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 ABCB4P21439 1286 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 CXCR5P32302 372 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 KCNJ12Q14500 433 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 MAP7D1Q3KQU3 841 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 TAOK1Q7L7X3 1001 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 EFCAB13Q8IY85 973 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 FBXO18Q8NFZ0 1043 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 TBC1D16Q8TBP0 767 aa10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 RRP36Q96EU6 259 aaKnown RBP10.73□□□□□ -0.69
MSC-AS1-201ENST00000457356 CIB2O75838 187 aa10.72□□□□□ -0.69
MSC-AS1-201ENST00000457356 LARGE1O95461 756 aa10.72□□□□□ -0.69
MSC-AS1-201ENST00000457356 ATP5DP30049 168 aa10.72□□□□□ -0.69
MSC-AS1-201ENST00000457356 CASP8Q14790 479 aa10.72□□□□□ -0.69
MSC-AS1-201ENST00000457356 NSMFQ6X4W1 530 aa10.72□□□□□ -0.69
MSC-AS1-201ENST00000457356 ARHGEF28Q8N1W1 1705 aaKnown RBP10.72□□□□□ -0.69
MSC-AS1-201ENST00000457356 ABCB6Q9NP58 842 aa10.72□□□□□ -0.69
MSC-AS1-201ENST00000457356 AOX1Q06278 1338 aa10.72□□□□□ -0.69
MSC-AS1-201ENST00000457356 VEGFAP15692 232 aaPredicted RBP10.72□□□□□ -0.69
MSC-AS1-201ENST00000457356 EHHADHQ08426 723 aa10.72□□□□□ -0.69
MSC-AS1-201ENST00000457356 SCRN1Q12765 414 aa10.72□□□□□ -0.69
MSC-AS1-201ENST00000457356 PDE1CQ14123 709 aaPredicted RBP10.72□□□□□ -0.69
MSC-AS1-201ENST00000457356 CFAP157Q5JU67 520 aa10.72□□□□□ -0.69
MSC-AS1-201ENST00000457356 DENND2CQ68D51 928 aa10.72□□□□□ -0.69
MSC-AS1-201ENST00000457356 PI16Q6UXB8 463 aa10.72□□□□□ -0.69
MSC-AS1-201ENST00000457356 SIRT2Q8IXJ6 389 aa10.72□□□□□ -0.69
MSC-AS1-201ENST00000457356 SMYD4Q8IYR2 804 aaPredicted RBP10.72□□□□□ -0.69
MSC-AS1-201ENST00000457356 CCDC51Q96ER9 411 aa10.72□□□□□ -0.69
MSC-AS1-201ENST00000457356 VCX3BQ9H321 246 aa10.72□□□□□ -0.69
MSC-AS1-201ENST00000457356 CCNT1O60563 726 aaKnown RBP10.72□□□□□ -0.69
MSC-AS1-201ENST00000457356 NTSR2O95665 410 aa10.72□□□□□ -0.69
MSC-AS1-201ENST00000457356 SF3B3Q15393 1217 aaKnown RBP10.72□□□□□ -0.69
MSC-AS1-201ENST00000457356 MUM1Q2TAK8 710 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms