RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 CCDC47Q96A33 483 aaKnown RBP20.6■□□□□ 0.89
SEMA3B-209ENST00000456560 MXD3Q9BW11 206 aa20.6■□□□□ 0.89
SEMA3B-209ENST00000456560 CCNE1P24864 410 aa20.59■□□□□ 0.89
SEMA3B-209ENST00000456560 KRT9P35527 623 aa20.59■□□□□ 0.89
SEMA3B-209ENST00000456560 CLCN6P51797 869 aa20.59■□□□□ 0.89
SEMA3B-209ENST00000456560 PPP2R3AQ06190 1150 aa20.59■□□□□ 0.89
SEMA3B-209ENST00000456560 PDE4DQ08499 809 aa20.59■□□□□ 0.89
SEMA3B-209ENST00000456560 COBLL1Q53SF7 1204 aa20.59■□□□□ 0.89
SEMA3B-209ENST00000456560 P2RX5Q93086 422 aa20.59■□□□□ 0.89
SEMA3B-209ENST00000456560 JMJD4Q9H9V9 463 aa20.59■□□□□ 0.89
SEMA3B-209ENST00000456560 GPCPD1Q9NPB8 672 aa20.59■□□□□ 0.89
SEMA3B-209ENST00000456560 NRXN2Q9P2S2 1712 aa20.59■□□□□ 0.89
SEMA3B-209ENST00000456560 NPR1P16066 1061 aa20.59■□□□□ 0.89
SEMA3B-209ENST00000456560 EIF6P56537 245 aaKnown RBP20.59■□□□□ 0.89
SEMA3B-209ENST00000456560 AMPD3Q01432 767 aa20.59■□□□□ 0.89
SEMA3B-209ENST00000456560 STK4Q13043 487 aa20.59■□□□□ 0.89
SEMA3B-209ENST00000456560 GRB10Q13322 594 aa20.59■□□□□ 0.89
SEMA3B-209ENST00000456560 PPP1R18Q6NYC8 613 aa20.59■□□□□ 0.89
SEMA3B-209ENST00000456560 HHIPL2Q6UWX4 724 aa20.59■□□□□ 0.89
SEMA3B-209ENST00000456560 RSRC2Q7L4I2 434 aaKnown RBP20.59■□□□□ 0.89
SEMA3B-209ENST00000456560 CALML4Q96GE6 196 aa20.59■□□□□ 0.89
SEMA3B-209ENST00000456560 EXOC1Q9NV70 894 aa20.59■□□□□ 0.89
SEMA3B-209ENST00000456560 PNMA6FA0A0J9YX94 578 aa20.58■□□□□ 0.89
SEMA3B-209ENST00000456560 KIF5CO60282 957 aa20.58■□□□□ 0.89
SEMA3B-209ENST00000456560 PPP1R2P41236 205 aa20.58■□□□□ 0.89
SEMA3B-209ENST00000456560 TXKP42681 527 aa20.58■□□□□ 0.89
SEMA3B-209ENST00000456560 ASIC1P78348 528 aa20.58■□□□□ 0.89
SEMA3B-209ENST00000456560 CALCRLQ16602 461 aa20.58■□□□□ 0.89
SEMA3B-209ENST00000456560 CDC42EP5Q6NZY7 148 aa20.58■□□□□ 0.89
SEMA3B-209ENST00000456560 ACRBPQ8NEB7 543 aa20.58■□□□□ 0.89
SEMA3B-209ENST00000456560 PNMA5Q96PV4 448 aa20.58■□□□□ 0.89
SEMA3B-209ENST00000456560 ST7Q9NRC1 585 aa20.58■□□□□ 0.89
SEMA3B-209ENST00000456560 BLOC1S4Q9NUP1 217 aa20.58■□□□□ 0.89
SEMA3B-209ENST00000456560 GREB1LQ9C091 1923 aaPredicted RBP20.58■□□□□ 0.89
SEMA3B-209ENST00000456560 SLC37A4O43826 429 aa20.58■□□□□ 0.88
SEMA3B-209ENST00000456560 SLC15A2Q16348 729 aa20.58■□□□□ 0.88
SEMA3B-209ENST00000456560 DOK7Q18PE1 504 aa20.58■□□□□ 0.88
SEMA3B-209ENST00000456560 ANKRD40Q6AI12 368 aa20.58■□□□□ 0.88
SEMA3B-209ENST00000456560 ADGRF4Q8IZF3 695 aa20.58■□□□□ 0.88
SEMA3B-209ENST00000456560 PDGFDQ9GZP0 370 aaPredicted RBP20.58■□□□□ 0.88
SEMA3B-209ENST00000456560 RIC8AQ9NPQ8 531 aa20.58■□□□□ 0.88
SEMA3B-209ENST00000456560 MAGEC2Q9UBF1 373 aaPredicted RBP20.58■□□□□ 0.88
SEMA3B-209ENST00000456560 TTC26A0AVF1 554 aa20.57■□□□□ 0.88
SEMA3B-209ENST00000456560 BICDL2A1A5D9 508 aa20.57■□□□□ 0.88
SEMA3B-209ENST00000456560 PPP1R11O60927 126 aaPredicted RBP20.57■□□□□ 0.88
SEMA3B-209ENST00000456560 SCNN1DP51172 638 aa20.57■□□□□ 0.88
SEMA3B-209ENST00000456560 APOBEC3HQ6NTF7 200 aaKnown RBP20.57■□□□□ 0.88
SEMA3B-209ENST00000456560 CSGALNACT2Q8N6G5 542 aa20.57■□□□□ 0.88
SEMA3B-209ENST00000456560 DNAJC7Q99615 494 aa20.57■□□□□ 0.88
SEMA3B-209ENST00000456560 LRWD1Q9UFC0 647 aa20.57■□□□□ 0.88
SEMA3B-209ENST00000456560 RGPD3A6NKT7 1758 aaPredicted RBP20.57■□□□□ 0.88
SEMA3B-209ENST00000456560 RGPD4Q7Z3J3 1758 aa20.57■□□□□ 0.88
SEMA3B-209ENST00000456560 TDP2O95551 362 aa20.57■□□□□ 0.88
SEMA3B-209ENST00000456560 FCER1AP12319 257 aa20.57■□□□□ 0.88
SEMA3B-209ENST00000456560 ARHGAP25P42331 645 aa20.57■□□□□ 0.88
SEMA3B-209ENST00000456560 DNM2P50570 870 aa20.57■□□□□ 0.88
SEMA3B-209ENST00000456560 PDIA5Q14554 519 aa20.57■□□□□ 0.88
SEMA3B-209ENST00000456560 STK17AQ9UEE5 414 aa20.57■□□□□ 0.88
SEMA3B-209ENST00000456560 CAPN11Q9UMQ6 739 aa20.57■□□□□ 0.88
SEMA3B-209ENST00000456560 ADAMTSL1Q8N6G6 1762 aa20.56■□□□□ 0.88
SEMA3B-209ENST00000456560 CLK2P49760 499 aaKnown RBP20.56■□□□□ 0.88
SEMA3B-209ENST00000456560 TTBK2Q6IQ55 1244 aa20.56■□□□□ 0.88
SEMA3B-209ENST00000456560 SV2BQ7L1I2 683 aa20.56■□□□□ 0.88
SEMA3B-209ENST00000456560 NLGN1Q8N2Q7 840 aa20.56■□□□□ 0.88
SEMA3B-209ENST00000456560 OR8K1Q8NGG5 319 aa20.56■□□□□ 0.88
SEMA3B-209ENST00000456560 TUBGCP2Q9BSJ2 902 aa20.56■□□□□ 0.88
SEMA3B-209ENST00000456560 STK32BQ9NY57 414 aa20.56■□□□□ 0.88
SEMA3B-209ENST00000456560 CCDC66A2RUB6 948 aa20.55■□□□□ 0.88
SEMA3B-209ENST00000456560 CNNM4Q6P4Q7 775 aa20.55■□□□□ 0.88
SEMA3B-209ENST00000456560 MTMR8Q96EF0 704 aa20.55■□□□□ 0.88
SEMA3B-209ENST00000456560 CHP1Q99653 195 aa20.55■□□□□ 0.88
SEMA3B-209ENST00000456560 FHOD1Q9Y613 1164 aa20.55■□□□□ 0.88
SEMA3B-209ENST00000456560 ALDH1B1P30837 517 aa20.55■□□□□ 0.88
SEMA3B-209ENST00000456560 ZNF569Q5MCW4 686 aa20.55■□□□□ 0.88
SEMA3B-209ENST00000456560 KIAA0895Q8NCT3 520 aa20.55■□□□□ 0.88
SEMA3B-209ENST00000456560 TEKT1Q969V4 418 aa20.55■□□□□ 0.88
SEMA3B-209ENST00000456560 LUC7L2Q9Y383 392 aaKnown RBP20.55■□□□□ 0.88
SEMA3B-209ENST00000456560 ZRANB2O95218 330 aaKnown RBP eCLIP20.54■□□□□ 0.88
SEMA3B-209ENST00000456560 ABL1P00519 1130 aa20.54■□□□□ 0.88
SEMA3B-209ENST00000456560 HMGB2P26583 209 aaKnown RBP20.54■□□□□ 0.88
SEMA3B-209ENST00000456560 TMEM266Q2M3C6 531 aa20.54■□□□□ 0.88
SEMA3B-209ENST00000456560 GPATCH4Q5T3I0 446 aaKnown RBP20.54■□□□□ 0.88
SEMA3B-209ENST00000456560 PPP4R3AQ6IN85 833 aa20.54■□□□□ 0.88
SEMA3B-209ENST00000456560 GPR161Q8N6U8 529 aaKnown RBP20.54■□□□□ 0.88
SEMA3B-209ENST00000456560 TTYH3Q9C0H2 523 aa20.54■□□□□ 0.88
SEMA3B-209ENST00000456560 EHD4Q9H223 541 aa20.54■□□□□ 0.88
SEMA3B-209ENST00000456560 ARGLU1Q9NWB6 273 aaPredicted RBP20.54■□□□□ 0.88
SEMA3B-209ENST00000456560 EPN1Q9Y6I3 576 aaPredicted RBP20.54■□□□□ 0.88
SEMA3B-209ENST00000456560 PVALEFA0A1B0GWK0 134 aa20.54■□□□□ 0.88
SEMA3B-209ENST00000456560 MYMKA6NI61 221 aa20.54■□□□□ 0.88
SEMA3B-209ENST00000456560 RASSF10A6NK89 507 aa20.54■□□□□ 0.88
SEMA3B-209ENST00000456560 B4DLN1 442 aa20.54■□□□□ 0.88
SEMA3B-209ENST00000456560 HLA-DOAP06340 250 aa20.54■□□□□ 0.88
SEMA3B-209ENST00000456560 TUBB2AQ13885 445 aa20.54■□□□□ 0.88
SEMA3B-209ENST00000456560 MCM6Q14566 821 aa20.54■□□□□ 0.88
SEMA3B-209ENST00000456560 FAM114A1Q8IWE2 563 aa20.54■□□□□ 0.88
SEMA3B-209ENST00000456560 SLF1Q9BQI6 1058 aa20.54■□□□□ 0.88
SEMA3B-209ENST00000456560 TUBB2BQ9BVA1 445 aa20.54■□□□□ 0.88
SEMA3B-209ENST00000456560 MYO1AQ9UBC5 1043 aa20.54■□□□□ 0.88
SEMA3B-209ENST00000456560 CDC23Q9UJX2 597 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms