RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 PRRC2BQ5JSZ5 2229 aaKnown RBP14.09□□□□□ -0.15
LMCD1-206ENST00000456506 NFIBO00712 420 aa14.09□□□□□ -0.15
LMCD1-206ENST00000456506 ORC4O43929 436 aa14.09□□□□□ -0.15
LMCD1-206ENST00000456506 SLC3A2P08195 630 aaKnown RBP14.09□□□□□ -0.15
LMCD1-206ENST00000456506 ALDH5A1P51649 535 aaPredicted RBP14.09□□□□□ -0.15
LMCD1-206ENST00000456506 LRRFIP1Q32MZ4 808 aaKnown RBP14.09□□□□□ -0.15
LMCD1-206ENST00000456506 CLEC4DQ8WXI8 215 aa14.09□□□□□ -0.15
LMCD1-206ENST00000456506 FSD1Q9BTV5 496 aa14.09□□□□□ -0.15
LMCD1-206ENST00000456506 AP5M1Q9H0R1 490 aa14.09□□□□□ -0.15
LMCD1-206ENST00000456506 THEGQ9P2T0 379 aa14.09□□□□□ -0.15
LMCD1-206ENST00000456506 CCPG1Q9ULG6 757 aa14.09□□□□□ -0.15
LMCD1-206ENST00000456506 LOC102724159A0A0B4J2E5 919 aa14.08□□□□□ -0.16
LMCD1-206ENST00000456506 TSPY2A6NKD2 308 aa14.08□□□□□ -0.16
LMCD1-206ENST00000456506 ERC2O15083 957 aa14.08□□□□□ -0.16
LMCD1-206ENST00000456506 MYOGP15173 224 aa14.08□□□□□ -0.16
LMCD1-206ENST00000456506 RABGGTBP53611 331 aa14.08□□□□□ -0.16
LMCD1-206ENST00000456506 PURAQ00577 322 aaKnown RBP14.08□□□□□ -0.16
LMCD1-206ENST00000456506 PWP2Q15269 919 aaKnown RBP14.08□□□□□ -0.16
LMCD1-206ENST00000456506 NOL8Q76FK4 1167 aaKnown RBP14.08□□□□□ -0.16
LMCD1-206ENST00000456506 DCAF4Q8WV16 495 aa14.08□□□□□ -0.16
LMCD1-206ENST00000456506 PPM1EQ8WY54 764 aa14.08□□□□□ -0.16
LMCD1-206ENST00000456506 SCLYQ96I15 445 aa14.08□□□□□ -0.16
LMCD1-206ENST00000456506 MSRAQ9UJ68 235 aa14.08□□□□□ -0.16
LMCD1-206ENST00000456506 DOCK5Q9H7D0 1870 aa14.08□□□□□ -0.16
LMCD1-206ENST00000456506 MICAL3Q7RTP6 2002 aa14.07□□□□□ -0.16
LMCD1-206ENST00000456506 MX1P20591 662 aa14.07□□□□□ -0.16
LMCD1-206ENST00000456506 EDNRBP24530 442 aa14.07□□□□□ -0.16
LMCD1-206ENST00000456506 SLC16A2P36021 539 aa14.07□□□□□ -0.16
LMCD1-206ENST00000456506 IKQ13123 557 aaPredicted RBP14.07□□□□□ -0.16
LMCD1-206ENST00000456506 BAATQ14032 418 aaPredicted RBP14.07□□□□□ -0.16
LMCD1-206ENST00000456506 TTLL4Q14679 1199 aa14.07□□□□□ -0.16
LMCD1-206ENST00000456506 ALX1Q15699 326 aa14.07□□□□□ -0.16
LMCD1-206ENST00000456506 PPP4R3BQ5MIZ7 849 aa14.07□□□□□ -0.16
LMCD1-206ENST00000456506 NSMFQ6X4W1 530 aa14.07□□□□□ -0.16
LMCD1-206ENST00000456506 SLC30A10Q6XR72 485 aa14.07□□□□□ -0.16
LMCD1-206ENST00000456506 KIAA1211Q6ZU35 1233 aa14.07□□□□□ -0.16
LMCD1-206ENST00000456506 TMEM47Q9BQJ4 181 aa14.07□□□□□ -0.16
LMCD1-206ENST00000456506 SLC28A3Q9HAS3 691 aa14.07□□□□□ -0.16
LMCD1-206ENST00000456506 TRMT13Q9NUP7 481 aaKnown RBP14.07□□□□□ -0.16
LMCD1-206ENST00000456506 PCDHA11Q9Y5I1 949 aa14.07□□□□□ -0.16
LMCD1-206ENST00000456506 NLRC5Q86WI3 1866 aa14.07□□□□□ -0.16
LMCD1-206ENST00000456506 ZEB2O60315 1214 aa14.06□□□□□ -0.16
LMCD1-206ENST00000456506 CYP2C9P11712 490 aa14.06□□□□□ -0.16
LMCD1-206ENST00000456506 POU3F3P20264 500 aaPredicted RBP14.06□□□□□ -0.16
LMCD1-206ENST00000456506 CCDC85BQ15834 202 aaPredicted RBP14.06□□□□□ -0.16
LMCD1-206ENST00000456506 ADAMTS19Q8TE59 1207 aa14.06□□□□□ -0.16
LMCD1-206ENST00000456506 MTIF3Q9H2K0 278 aaKnown RBP14.06□□□□□ -0.16
LMCD1-206ENST00000456506 TCP11L1Q9NUJ3 509 aa14.06□□□□□ -0.16
LMCD1-206ENST00000456506 ISY1Q9ULR0 285 aaKnown RBP14.06□□□□□ -0.16
LMCD1-206ENST00000456506 TNKSO95271 1327 aa14.06□□□□□ -0.16
LMCD1-206ENST00000456506 RANBP6O60518 1105 aaKnown RBP14.05□□□□□ -0.16
LMCD1-206ENST00000456506 ARHGEF15O94989 841 aa14.05□□□□□ -0.16
LMCD1-206ENST00000456506 SNHG28P0DPA3 235 aa14.05□□□□□ -0.16
LMCD1-206ENST00000456506 PDHBP11177 359 aa14.05□□□□□ -0.16
LMCD1-206ENST00000456506 SYDE2Q5VT97 1194 aa14.05□□□□□ -0.16
LMCD1-206ENST00000456506 RPUSD2Q8IZ73 545 aaKnown RBP14.05□□□□□ -0.16
LMCD1-206ENST00000456506 CTAGE1Q96RT6 745 aa14.05□□□□□ -0.16
LMCD1-206ENST00000456506 WDR11Q9BZH6 1224 aa14.05□□□□□ -0.16
LMCD1-206ENST00000456506 POLR3EQ9NVU0 708 aa14.05□□□□□ -0.16
LMCD1-206ENST00000456506 ADD3Q9UEY8 706 aaKnown RBP14.05□□□□□ -0.16
LMCD1-206ENST00000456506 SLC4A7Q9Y6M7 1214 aa14.05□□□□□ -0.16
LMCD1-206ENST00000456506 ZMYM6O95789 1325 aa14.05□□□□□ -0.16
LMCD1-206ENST00000456506 A0A0D9SFI3 127 aa14.04□□□□□ -0.16
LMCD1-206ENST00000456506 EPOPA6NHQ4 379 aa14.04□□□□□ -0.16
LMCD1-206ENST00000456506 A6NJR5 290 aa14.04□□□□□ -0.16
LMCD1-206ENST00000456506 FGAP02671 866 aa14.04□□□□□ -0.16
LMCD1-206ENST00000456506 PFKMP08237 780 aa14.04□□□□□ -0.16
LMCD1-206ENST00000456506 TOP1P11387 765 aaKnown RBP14.04□□□□□ -0.16
LMCD1-206ENST00000456506 BMP1P13497 986 aa14.04□□□□□ -0.16
LMCD1-206ENST00000456506 COL9A1P20849 921 aa14.04□□□□□ -0.16
LMCD1-206ENST00000456506 IGFBP4P22692 258 aa14.04□□□□□ -0.16
LMCD1-206ENST00000456506 MRPS5P82675 430 aaKnown RBP14.04□□□□□ -0.16
LMCD1-206ENST00000456506 CCDC96Q2M329 555 aa14.04□□□□□ -0.16
LMCD1-206ENST00000456506 PPP1R13LQ8WUF5 828 aa14.04□□□□□ -0.16
LMCD1-206ENST00000456506 FAM227BQ96M60 508 aa14.04□□□□□ -0.16
LMCD1-206ENST00000456506 MTMR7Q9Y216 660 aa14.04□□□□□ -0.16
LMCD1-206ENST00000456506 FRMPD2Q68DX3 1309 aaPredicted RBP14.04□□□□□ -0.16
LMCD1-206ENST00000456506 ARIH2O95376 493 aa14.03□□□□□ -0.16
LMCD1-206ENST00000456506 ATP2A2P16615 1042 aaKnown RBP14.03□□□□□ -0.16
LMCD1-206ENST00000456506 CPT1AP50416 773 aa14.03□□□□□ -0.16
LMCD1-206ENST00000456506 RPS6P62753 249 aaKnown RBP14.03□□□□□ -0.16
LMCD1-206ENST00000456506 ZNF543Q08ER8 600 aa14.03□□□□□ -0.16
LMCD1-206ENST00000456506 GPNMBQ14956 572 aa14.03□□□□□ -0.16
LMCD1-206ENST00000456506 NBPF20Q3BBV1 942 aa14.03□□□□□ -0.16
LMCD1-206ENST00000456506 PPP2R2DQ66LE6 453 aa14.03□□□□□ -0.16
LMCD1-206ENST00000456506 COPS5Q92905 334 aa14.03□□□□□ -0.16
LMCD1-206ENST00000456506 MTG1Q9BT17 334 aaPredicted RBP14.03□□□□□ -0.16
LMCD1-206ENST00000456506 HELLSQ9NRZ9 838 aa14.03□□□□□ -0.16
LMCD1-206ENST00000456506 RAPGEFL1Q9UHV5 662 aa14.03□□□□□ -0.16
LMCD1-206ENST00000456506 MTCH2Q9Y6C9 303 aa14.03□□□□□ -0.16
LMCD1-206ENST00000456506 WDR19Q8NEZ3 1342 aa14.03□□□□□ -0.16
LMCD1-206ENST00000456506 RFXAPO00287 272 aa14.02□□□□□ -0.17
LMCD1-206ENST00000456506 PITPNM1O00562 1244 aa14.02□□□□□ -0.17
LMCD1-206ENST00000456506 CA3P07451 260 aa14.02□□□□□ -0.17
LMCD1-206ENST00000456506 IQCF3P0C7M6 154 aa14.02□□□□□ -0.17
LMCD1-206ENST00000456506 SUPT20HL2P0C7V6 817 aa14.02□□□□□ -0.17
LMCD1-206ENST00000456506 TFF2Q03403 129 aa14.02□□□□□ -0.17
LMCD1-206ENST00000456506 NFRKBQ6P4R8 1299 aa14.02□□□□□ -0.17
LMCD1-206ENST00000456506 RNF207Q6ZRF8 634 aa14.02□□□□□ -0.17
LMCD1-206ENST00000456506 ZNF589Q86UQ0 364 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms