RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 RBM19Q9Y4C8 960 aaKnown RBP20.57■□□□□ 0.88
COPS7A-202ENST00000455113 ALDH5A1P51649 535 aaPredicted RBP20.56■□□□□ 0.88
COPS7A-202ENST00000455113 LRRC41Q15345 812 aa20.56■□□□□ 0.88
COPS7A-202ENST00000455113 SLC30A10Q6XR72 485 aa20.56■□□□□ 0.88
COPS7A-202ENST00000455113 DHX32Q7L7V1 743 aaKnown RBP20.56■□□□□ 0.88
COPS7A-202ENST00000455113 LZTS2Q9BRK4 669 aa20.56■□□□□ 0.88
COPS7A-202ENST00000455113 RIOX1Q9H6W3 641 aa20.56■□□□□ 0.88
COPS7A-202ENST00000455113 PCDHA1Q9Y5I3 950 aa20.56■□□□□ 0.88
COPS7A-202ENST00000455113 DUSP11O75319 330 aaKnown RBP20.56■□□□□ 0.88
COPS7A-202ENST00000455113 PGK1P00558 417 aa20.56■□□□□ 0.88
COPS7A-202ENST00000455113 JAKMIP1Q96N16 626 aaKnown RBP20.56■□□□□ 0.88
COPS7A-202ENST00000455113 MYL10Q9BUA6 226 aa20.56■□□□□ 0.88
COPS7A-202ENST00000455113 LRRC2Q9BYS8 371 aa20.56■□□□□ 0.88
COPS7A-202ENST00000455113 H0YGN5 161 aa20.55■□□□□ 0.88
COPS7A-202ENST00000455113 EEPD1Q7L9B9 569 aa20.55■□□□□ 0.88
COPS7A-202ENST00000455113 VTA1Q9NP79 307 aa20.55■□□□□ 0.88
COPS7A-202ENST00000455113 GPHNQ9NQX3 736 aaPredicted RBP20.55■□□□□ 0.88
COPS7A-202ENST00000455113 SEC63Q9UGP8 760 aaKnown RBP20.55■□□□□ 0.88
COPS7A-202ENST00000455113 TNFAIP2Q03169 654 aa20.54■□□□□ 0.88
COPS7A-202ENST00000455113 PDE4DQ08499 809 aa20.54■□□□□ 0.88
COPS7A-202ENST00000455113 C7orf61Q8IZ16 206 aa20.54■□□□□ 0.88
COPS7A-202ENST00000455113 MTMR8Q96EF0 704 aa20.54■□□□□ 0.88
COPS7A-202ENST00000455113 PURBQ96QR8 312 aaKnown RBP20.54■□□□□ 0.88
COPS7A-202ENST00000455113 PIGSQ96S52 555 aa20.54■□□□□ 0.88
COPS7A-202ENST00000455113 PNMA6FA0A0J9YX94 578 aa20.53■□□□□ 0.88
COPS7A-202ENST00000455113 CFBP00751 764 aa20.53■□□□□ 0.88
COPS7A-202ENST00000455113 C6orf222P0C671 652 aaPredicted RBP20.53■□□□□ 0.88
COPS7A-202ENST00000455113 CASTP20810 708 aaKnown RBP20.53■□□□□ 0.88
COPS7A-202ENST00000455113 PSMA5P28066 241 aa20.53■□□□□ 0.88
COPS7A-202ENST00000455113 RABEP1Q15276 862 aa20.53■□□□□ 0.88
COPS7A-202ENST00000455113 RRP36Q96EU6 259 aaKnown RBP20.53■□□□□ 0.88
COPS7A-202ENST00000455113 TM6SF1Q9BZW5 370 aa20.53■□□□□ 0.88
COPS7A-202ENST00000455113 MAP3K20Q9NYL2 800 aaKnown RBP20.53■□□□□ 0.88
COPS7A-202ENST00000455113 SYNRGQ9UMZ2 1314 aa20.53■□□□□ 0.88
COPS7A-202ENST00000455113 SMARCA1P28370 1054 aa20.53■□□□□ 0.88
COPS7A-202ENST00000455113 ATN1P54259 1190 aaPredicted RBP20.53■□□□□ 0.88
COPS7A-202ENST00000455113 IQSEC1Q6DN90 963 aa20.53■□□□□ 0.88
COPS7A-202ENST00000455113 SGMS1Q86VZ5 419 aa20.53■□□□□ 0.88
COPS7A-202ENST00000455113 FBXO16Q8IX29 292 aaPredicted RBP20.53■□□□□ 0.88
COPS7A-202ENST00000455113 PCSK9Q8NBP7 692 aaKnown RBP20.53■□□□□ 0.88
COPS7A-202ENST00000455113 LENG1Q96BZ8 264 aaPredicted RBP20.53■□□□□ 0.88
COPS7A-202ENST00000455113 UPF3BQ9BZI7 483 aaKnown RBP20.53■□□□□ 0.88
COPS7A-202ENST00000455113 BAZ2BQ9UIF8 2168 aaKnown RBP20.52■□□□□ 0.88
COPS7A-202ENST00000455113 ASTN1O14525 1302 aa20.52■□□□□ 0.88
COPS7A-202ENST00000455113 ADCYAP1R1P41586 468 aa20.52■□□□□ 0.88
COPS7A-202ENST00000455113 COL9A3Q14050 684 aaPredicted RBP20.52■□□□□ 0.88
COPS7A-202ENST00000455113 MICU3Q86XE3 530 aa20.52■□□□□ 0.88
COPS7A-202ENST00000455113 SAMD3Q8N6K7 520 aa20.52■□□□□ 0.88
COPS7A-202ENST00000455113 MORC4Q8TE76 937 aa20.52■□□□□ 0.88
COPS7A-202ENST00000455113 NSUN6Q8TEA1 469 aaKnown RBP20.52■□□□□ 0.88
COPS7A-202ENST00000455113 PIBF1Q8WXW3 757 aa20.52■□□□□ 0.88
COPS7A-202ENST00000455113 TSEN34Q9BSV6 310 aaKnown RBP20.52■□□□□ 0.88
COPS7A-202ENST00000455113 SPZ1Q9BXG8 430 aa20.52■□□□□ 0.88
COPS7A-202ENST00000455113 KATNBL1Q9H079 304 aa20.52■□□□□ 0.88
COPS7A-202ENST00000455113 ZSWIM6Q9HCJ5 1215 aa20.52■□□□□ 0.88
COPS7A-202ENST00000455113 LCTP09848 1927 aa20.52■□□□□ 0.88
COPS7A-202ENST00000455113 MOXD2PA6NHM9 499 aa20.51■□□□□ 0.87
COPS7A-202ENST00000455113 CYTH3O43739 400 aa20.51■□□□□ 0.87
COPS7A-202ENST00000455113 ADAMTS4O75173 837 aa20.51■□□□□ 0.87
COPS7A-202ENST00000455113 CPA1P15085 419 aa20.51■□□□□ 0.87
COPS7A-202ENST00000455113 RXRAP19793 462 aa20.51■□□□□ 0.87
COPS7A-202ENST00000455113 EXOSC10Q01780 885 aaKnown RBP20.51■□□□□ 0.87
COPS7A-202ENST00000455113 BLOC1S2Q6QNY1 142 aa20.51■□□□□ 0.87
COPS7A-202ENST00000455113 FANCBQ8NB91 859 aa20.51■□□□□ 0.87
COPS7A-202ENST00000455113 FERMT2Q96AC1 680 aa20.51■□□□□ 0.87
COPS7A-202ENST00000455113 AP5M1Q9H0R1 490 aa20.51■□□□□ 0.87
COPS7A-202ENST00000455113 NEK4P51957 841 aa20.5■□□□□ 0.87
COPS7A-202ENST00000455113 LRRC26Q2I0M4 334 aa20.5■□□□□ 0.87
COPS7A-202ENST00000455113 ARHGEF16Q5VV41 709 aa20.5■□□□□ 0.87
COPS7A-202ENST00000455113 SYTL5Q8TDW5 730 aaPredicted RBP20.5■□□□□ 0.87
COPS7A-202ENST00000455113 TCEANC2Q96MN5 208 aa20.5■□□□□ 0.87
COPS7A-202ENST00000455113 RBM28Q9NW13 759 aaKnown RBP20.5■□□□□ 0.87
COPS7A-202ENST00000455113 PRKAG2Q9UGJ0 569 aa20.5■□□□□ 0.87
COPS7A-202ENST00000455113 PHF24Q9UPV7 400 aa20.5■□□□□ 0.87
COPS7A-202ENST00000455113 CYP46A1Q9Y6A2 500 aa20.5■□□□□ 0.87
COPS7A-202ENST00000455113 ALPK3Q96L96 1907 aa20.5■□□□□ 0.87
COPS7A-202ENST00000455113 GJA9P57773 515 aa20.5■□□□□ 0.87
COPS7A-202ENST00000455113 GNASQ5JWF2 1037 aa20.5■□□□□ 0.87
COPS7A-202ENST00000455113 SLC39A5Q6ZMH5 540 aa20.5■□□□□ 0.87
COPS7A-202ENST00000455113 RUFY3Q7L099 469 aa20.5■□□□□ 0.87
COPS7A-202ENST00000455113 TBC1D5Q92609 795 aa20.5■□□□□ 0.87
COPS7A-202ENST00000455113 RMDN3Q96TC7 470 aa20.5■□□□□ 0.87
COPS7A-202ENST00000455113 NAP1L2Q9ULW6 460 aaPredicted RBP20.5■□□□□ 0.87
COPS7A-202ENST00000455113 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.49■□□□□ 0.87
COPS7A-202ENST00000455113 ZBTB43O43298 467 aa20.49■□□□□ 0.87
COPS7A-202ENST00000455113 ZEB2O60315 1214 aa20.49■□□□□ 0.87
COPS7A-202ENST00000455113 KCNA10Q16322 511 aa20.49■□□□□ 0.87
COPS7A-202ENST00000455113 APOA5Q6Q788 366 aa20.49■□□□□ 0.87
COPS7A-202ENST00000455113 TLK2Q86UE8 772 aa20.49■□□□□ 0.87
COPS7A-202ENST00000455113 RAB11FIP4Q86YS3 637 aa20.49■□□□□ 0.87
COPS7A-202ENST00000455113 GLT1D1Q96MS3 346 aa20.49■□□□□ 0.87
COPS7A-202ENST00000455113 IWS1Q96ST2 819 aa20.49■□□□□ 0.87
COPS7A-202ENST00000455113 PDGFCQ9NRA1 345 aa20.49■□□□□ 0.87
COPS7A-202ENST00000455113 Q9Y3F1 56 aa20.49■□□□□ 0.87
COPS7A-202ENST00000455113 DDX49Q9Y6V7 483 aaKnown RBP20.49■□□□□ 0.87
COPS7A-202ENST00000455113 GCOM1H8Y6P7 765 aaPredicted RBP20.48■□□□□ 0.87
COPS7A-202ENST00000455113 PPP1R11O60927 126 aaPredicted RBP20.48■□□□□ 0.87
COPS7A-202ENST00000455113 POLR2MP0CAP2 368 aa20.48■□□□□ 0.87
COPS7A-202ENST00000455113 RPS6KB1P23443 525 aa20.48■□□□□ 0.87
COPS7A-202ENST00000455113 CST5P28325 142 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms