RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 KIAA1211Q6ZU35 1233 aa19.21■□□□□ 0.67
NCKIPSD-208ENST00000454134 STOX1Q6ZVD7 989 aa19.21■□□□□ 0.67
NCKIPSD-208ENST00000454134 CHST3Q7LGC8 479 aa19.21■□□□□ 0.67
NCKIPSD-208ENST00000454134 AP5M1Q9H0R1 490 aa19.21■□□□□ 0.67
NCKIPSD-208ENST00000454134 JMJD4Q9H9V9 463 aa19.21■□□□□ 0.67
NCKIPSD-208ENST00000454134 SENP2Q9HC62 589 aa19.21■□□□□ 0.67
NCKIPSD-208ENST00000454134 VTA1Q9NP79 307 aa19.21■□□□□ 0.67
NCKIPSD-208ENST00000454134 IFIT3O14879 490 aaKnown RBP19.2■□□□□ 0.66
NCKIPSD-208ENST00000454134 LRIT3Q3SXY7 679 aa19.2■□□□□ 0.66
NCKIPSD-208ENST00000454134 RALYLQ86SE5 291 aaKnown RBP19.2■□□□□ 0.66
NCKIPSD-208ENST00000454134 TBC1D5Q92609 795 aa19.2■□□□□ 0.66
NCKIPSD-208ENST00000454134 MAP4K1Q92918 833 aa19.2■□□□□ 0.66
NCKIPSD-208ENST00000454134 RBM8AQ9Y5S9 174 aaKnown RBP19.2■□□□□ 0.66
NCKIPSD-208ENST00000454134 NKX3-2P78367 333 aa19.19■□□□□ 0.66
NCKIPSD-208ENST00000454134 FAAP100Q0VG06 881 aa19.19■□□□□ 0.66
NCKIPSD-208ENST00000454134 FSCN1Q16658 493 aaKnown RBP19.19■□□□□ 0.66
NCKIPSD-208ENST00000454134 CXCL17Q6UXB2 119 aa19.19■□□□□ 0.66
NCKIPSD-208ENST00000454134 ANKRD33Q7Z3H0 272 aa19.19■□□□□ 0.66
NCKIPSD-208ENST00000454134 NCOA7Q8NI08 942 aa19.19■□□□□ 0.66
NCKIPSD-208ENST00000454134 TMEM39AQ9NV64 488 aa19.19■□□□□ 0.66
NCKIPSD-208ENST00000454134 ELP1O95163 1332 aa19.19■□□□□ 0.66
NCKIPSD-208ENST00000454134 ABCB11O95342 1321 aa19.19■□□□□ 0.66
NCKIPSD-208ENST00000454134 DCDC2CA8MYV0 355 aa19.18■□□□□ 0.66
NCKIPSD-208ENST00000454134 KLRF2D3W0D1 207 aa19.18■□□□□ 0.66
NCKIPSD-208ENST00000454134 KIAA0355O15063 1070 aa19.18■□□□□ 0.66
NCKIPSD-208ENST00000454134 PDE4DQ08499 809 aa19.18■□□□□ 0.66
NCKIPSD-208ENST00000454134 FBXO11Q86XK2 927 aa19.18■□□□□ 0.66
NCKIPSD-208ENST00000454134 WDR11Q9BZH6 1224 aa19.18■□□□□ 0.66
NCKIPSD-208ENST00000454134 MAD2L2Q9UI95 211 aa19.18■□□□□ 0.66
NCKIPSD-208ENST00000454134 LOC102724159A0A0B4J2E5 919 aa19.17■□□□□ 0.66
NCKIPSD-208ENST00000454134 A0A0U1RQG5 324 aaPredicted RBP19.17■□□□□ 0.66
NCKIPSD-208ENST00000454134 RAG1P15918 1043 aa19.17■□□□□ 0.66
NCKIPSD-208ENST00000454134 CDK7P50613 346 aa19.17■□□□□ 0.66
NCKIPSD-208ENST00000454134 PWP2Q15269 919 aaKnown RBP19.17■□□□□ 0.66
NCKIPSD-208ENST00000454134 SHHQ15465 462 aa19.17■□□□□ 0.66
NCKIPSD-208ENST00000454134 C9orf50Q5SZB4 431 aa19.17■□□□□ 0.66
NCKIPSD-208ENST00000454134 CENPQQ7L2Z9 268 aaPredicted RBP19.17■□□□□ 0.66
NCKIPSD-208ENST00000454134 RGS22Q8NE09 1264 aa19.17■□□□□ 0.66
NCKIPSD-208ENST00000454134 TOX2Q96NM4 488 aa19.17■□□□□ 0.66
NCKIPSD-208ENST00000454134 ESYT1Q9BSJ8 1104 aa19.17■□□□□ 0.66
NCKIPSD-208ENST00000454134 COL20A1Q9P218 1284 aa19.17■□□□□ 0.66
NCKIPSD-208ENST00000454134 MYH6P13533 1939 aa19.17■□□□□ 0.66
NCKIPSD-208ENST00000454134 ERICH2A1L162 156 aa19.16■□□□□ 0.66
NCKIPSD-208ENST00000454134 PALM3A6NDB9 673 aaPredicted RBP19.16■□□□□ 0.66
NCKIPSD-208ENST00000454134 ARVCFO00192 962 aa19.16■□□□□ 0.66
NCKIPSD-208ENST00000454134 EDNRBP24530 442 aa19.16■□□□□ 0.66
NCKIPSD-208ENST00000454134 ANTXR2P58335 489 aa19.16■□□□□ 0.66
NCKIPSD-208ENST00000454134 WTAPQ15007 396 aa19.16■□□□□ 0.66
NCKIPSD-208ENST00000454134 SLC35G1Q2M3R5 365 aa19.16■□□□□ 0.66
NCKIPSD-208ENST00000454134 DUSP28Q4G0W2 176 aa19.16■□□□□ 0.66
NCKIPSD-208ENST00000454134 TMEM67Q5HYA8 995 aa19.16■□□□□ 0.66
NCKIPSD-208ENST00000454134 DNERQ8NFT8 737 aa19.16■□□□□ 0.66
NCKIPSD-208ENST00000454134 SYTL5Q8TDW5 730 aaPredicted RBP19.16■□□□□ 0.66
NCKIPSD-208ENST00000454134 TAAR1Q96RJ0 339 aa19.16■□□□□ 0.66
NCKIPSD-208ENST00000454134 LSG1Q9H089 658 aaKnown RBP19.16■□□□□ 0.66
NCKIPSD-208ENST00000454134 Q9Y3F1 56 aa19.16■□□□□ 0.66
NCKIPSD-208ENST00000454134 RBM47A0AV96 593 aaKnown RBP19.15■□□□□ 0.66
NCKIPSD-208ENST00000454134 PPP1R11O60927 126 aaPredicted RBP19.15■□□□□ 0.66
NCKIPSD-208ENST00000454134 EPHB4P54760 987 aa19.15■□□□□ 0.66
NCKIPSD-208ENST00000454134 GRM4Q14833 912 aa19.15■□□□□ 0.66
NCKIPSD-208ENST00000454134 SART3Q15020 963 aaKnown RBP19.15■□□□□ 0.66
NCKIPSD-208ENST00000454134 Q7L0L9 218 aa19.15■□□□□ 0.66
NCKIPSD-208ENST00000454134 MB21D2Q8IYB1 491 aaPredicted RBP19.15■□□□□ 0.66
NCKIPSD-208ENST00000454134 MPHOSPH6Q99547 160 aaKnown RBP19.15■□□□□ 0.66
NCKIPSD-208ENST00000454134 GPHNQ9NQX3 736 aaPredicted RBP19.15■□□□□ 0.66
NCKIPSD-208ENST00000454134 TBX21Q9UL17 535 aa19.15■□□□□ 0.66
NCKIPSD-208ENST00000454134 MRPL11Q9Y3B7 192 aaKnown RBP19.15■□□□□ 0.66
NCKIPSD-208ENST00000454134 ZEB2O60315 1214 aa19.14■□□□□ 0.65
NCKIPSD-208ENST00000454134 PSMC6P62333 389 aa19.14■□□□□ 0.65
NCKIPSD-208ENST00000454134 COL9A3Q14050 684 aaPredicted RBP19.14■□□□□ 0.65
NCKIPSD-208ENST00000454134 HOMER1Q86YM7 354 aa19.14■□□□□ 0.65
NCKIPSD-208ENST00000454134 MCF2L2Q86YR7 1114 aa19.14■□□□□ 0.65
NCKIPSD-208ENST00000454134 FAM126BQ8IXS8 530 aa19.14■□□□□ 0.65
NCKIPSD-208ENST00000454134 OR6J1Q8NGC5 347 aa19.14■□□□□ 0.65
NCKIPSD-208ENST00000454134 IGDCC4Q8TDY8 1250 aa19.14■□□□□ 0.65
NCKIPSD-208ENST00000454134 MTMR8Q96EF0 704 aa19.14■□□□□ 0.65
NCKIPSD-208ENST00000454134 AMNQ9BXJ7 453 aa19.14■□□□□ 0.65
NCKIPSD-208ENST00000454134 GRIN2DO15399 1336 aa19.14■□□□□ 0.65
NCKIPSD-208ENST00000454134 MROH7Q68CQ1 1323 aa19.14■□□□□ 0.65
NCKIPSD-208ENST00000454134 OPLAHO14841 1288 aa19.13■□□□□ 0.65
NCKIPSD-208ENST00000454134 CFBP00751 764 aa19.13■□□□□ 0.65
NCKIPSD-208ENST00000454134 TROAPQ12815 778 aa19.13■□□□□ 0.65
NCKIPSD-208ENST00000454134 ITGA7Q13683 1181 aa19.13■□□□□ 0.65
NCKIPSD-208ENST00000454134 PPP2R5BQ15173 497 aa19.13■□□□□ 0.65
NCKIPSD-208ENST00000454134 BMP2KLQ5H9B9 411 aa19.13■□□□□ 0.65
NCKIPSD-208ENST00000454134 DEFB123Q8N688 67 aa19.13■□□□□ 0.65
NCKIPSD-208ENST00000454134 COPS5Q92905 334 aa19.13■□□□□ 0.65
NCKIPSD-208ENST00000454134 RMDN3Q96TC7 470 aa19.13■□□□□ 0.65
NCKIPSD-208ENST00000454134 ANO2Q9NQ90 1003 aa19.13■□□□□ 0.65
NCKIPSD-208ENST00000454134 B4DLN1 442 aa19.12■□□□□ 0.65
NCKIPSD-208ENST00000454134 SLC27A2O14975 620 aa19.12■□□□□ 0.65
NCKIPSD-208ENST00000454134 ZBTB5O15062 677 aa19.12■□□□□ 0.65
NCKIPSD-208ENST00000454134 CYTH3O43739 400 aa19.12■□□□□ 0.65
NCKIPSD-208ENST00000454134 CABYRO75952 493 aa19.12■□□□□ 0.65
NCKIPSD-208ENST00000454134 TIMP1P01033 207 aa19.12■□□□□ 0.65
NCKIPSD-208ENST00000454134 MRPL12P52815 198 aaKnown RBP19.12■□□□□ 0.65
NCKIPSD-208ENST00000454134 FPGSQ05932 587 aa19.12■□□□□ 0.65
NCKIPSD-208ENST00000454134 GPR153Q6NV75 609 aa19.12■□□□□ 0.65
NCKIPSD-208ENST00000454134 CATIPQ7Z7H3 387 aa19.12■□□□□ 0.65
NCKIPSD-208ENST00000454134 SLC43A3Q8NBI5 491 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms