RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 DHX8Q14562 1220 aaKnown RBP18■□□□□ 0.47
SNX17-204ENST00000453453 COG2Q14746 738 aa18■□□□□ 0.47
SNX17-204ENST00000453453 CCDC174Q6PII3 467 aa18■□□□□ 0.47
SNX17-204ENST00000453453 CATSPERGQ6ZRH7 1159 aa18■□□□□ 0.47
SNX17-204ENST00000453453 CCDC194A0A1B0GVG4 234 aa17.99■□□□□ 0.47
SNX17-204ENST00000453453 KIF2AO00139 706 aaPredicted RBP17.99■□□□□ 0.47
SNX17-204ENST00000453453 PABPC4Q13310 644 aaKnown RBP eCLIP17.99■□□□□ 0.479e-12■■■■□ 23.3
SNX17-204ENST00000453453 USH1GQ495M9 461 aa17.99■□□□□ 0.47
SNX17-204ENST00000453453 RILPL1Q5EBL4 403 aa17.99■□□□□ 0.47
SNX17-204ENST00000453453 REXO1Q8N1G1 1221 aaKnown RBP17.99■□□□□ 0.47
SNX17-204ENST00000453453 SPC24Q8NBT2 197 aa17.99■□□□□ 0.47
SNX17-204ENST00000453453 WNK4Q96J92 1243 aa17.99■□□□□ 0.47
SNX17-204ENST00000453453 RIC8AQ9NPQ8 531 aa17.99■□□□□ 0.47
SNX17-204ENST00000453453 ABCB11O95342 1321 aa17.98■□□□□ 0.47
SNX17-204ENST00000453453 GOLGA6L4A6NEF3 574 aa17.98■□□□□ 0.47
SNX17-204ENST00000453453 NPY5RQ15761 445 aa17.98■□□□□ 0.47
SNX17-204ENST00000453453 TEX2Q8IWB9 1127 aa17.98■□□□□ 0.47
SNX17-204ENST00000453453 CCDC112Q8NEF3 446 aa17.98■□□□□ 0.47
SNX17-204ENST00000453453 MRFAP1L1Q96HT8 127 aa17.98■□□□□ 0.47
SNX17-204ENST00000453453 PSTPIP2Q9H939 334 aa17.98■□□□□ 0.47
SNX17-204ENST00000453453 HOXC10Q9NYD6 342 aa17.98■□□□□ 0.47
SNX17-204ENST00000453453 RLFQ13129 1914 aa17.98■□□□□ 0.47
SNX17-204ENST00000453453 KIF3CO14782 793 aa17.98■□□□□ 0.47
SNX17-204ENST00000453453 ICAM1P05362 532 aa17.98■□□□□ 0.47
SNX17-204ENST00000453453 DSG3P32926 999 aa17.98■□□□□ 0.47
SNX17-204ENST00000453453 HUNKP57058 714 aa17.98■□□□□ 0.47
SNX17-204ENST00000453453 ANO6Q4KMQ2 910 aa17.98■□□□□ 0.47
SNX17-204ENST00000453453 CST9Q5W186 159 aa17.98■□□□□ 0.47
SNX17-204ENST00000453453 CCDC186Q7Z3E2 898 aa17.98■□□□□ 0.47
SNX17-204ENST00000453453 KRT25Q7Z3Z0 450 aa17.98■□□□□ 0.47
SNX17-204ENST00000453453 SPATA32Q96LK8 384 aa17.98■□□□□ 0.47
SNX17-204ENST00000453453 ARID3AQ99856 593 aa17.98■□□□□ 0.47
SNX17-204ENST00000453453 SLC38A10Q9HBR0 1119 aa17.98■□□□□ 0.47
SNX17-204ENST00000453453 TFIP11Q9UBB9 837 aaKnown RBP17.98■□□□□ 0.47
SNX17-204ENST00000453453 DDX41Q9UJV9 622 aaKnown RBP17.98■□□□□ 0.47
SNX17-204ENST00000453453 ZHX1Q9UKY1 873 aaPredicted RBP17.98■□□□□ 0.47
SNX17-204ENST00000453453 CCPG1Q9ULG6 757 aa17.98■□□□□ 0.47
SNX17-204ENST00000453453 MRPL11Q9Y3B7 192 aaKnown RBP17.98■□□□□ 0.47
SNX17-204ENST00000453453 MORC2Q9Y6X9 1032 aaPredicted RBP17.98■□□□□ 0.47
SNX17-204ENST00000453453 COL11A1P12107 1806 aaPredicted RBP17.97■□□□□ 0.47
SNX17-204ENST00000453453 TNNT1P13805 278 aa17.97■□□□□ 0.47
SNX17-204ENST00000453453 LIG1P18858 919 aa17.97■□□□□ 0.47
SNX17-204ENST00000453453 GTF2A2P52657 109 aa17.97■□□□□ 0.47
SNX17-204ENST00000453453 IRX3P78415 501 aaPredicted RBP17.97■□□□□ 0.47
SNX17-204ENST00000453453 MCTP2Q6DN12 878 aa17.97■□□□□ 0.47
SNX17-204ENST00000453453 TNFRSF25Q93038 417 aa17.97■□□□□ 0.47
SNX17-204ENST00000453453 ATG4CQ96DT6 458 aa17.97■□□□□ 0.47
SNX17-204ENST00000453453 PCDHA6Q9UN73 950 aa17.97■□□□□ 0.47
SNX17-204ENST00000453453 AGTPBP1Q9UPW5 1226 aa17.97■□□□□ 0.47
SNX17-204ENST00000453453 PCDHA8Q9Y5H6 950 aa17.97■□□□□ 0.47
SNX17-204ENST00000453453 PASKQ96RG2 1323 aa17.96■□□□□ 0.47
SNX17-204ENST00000453453 VWA5AO00534 786 aa17.96■□□□□ 0.47
SNX17-204ENST00000453453 ZBTB48P10074 688 aaPredicted RBP17.96■□□□□ 0.47
SNX17-204ENST00000453453 CETPP11597 493 aa17.96■□□□□ 0.47
SNX17-204ENST00000453453 HOXA7P31268 230 aaPredicted RBP17.96■□□□□ 0.47
SNX17-204ENST00000453453 TREML2Q5T2D2 321 aa17.96■□□□□ 0.47
SNX17-204ENST00000453453 PIK3AP1Q6ZUJ8 805 aa17.96■□□□□ 0.47
SNX17-204ENST00000453453 LEO1Q8WVC0 666 aaPredicted RBP17.96■□□□□ 0.47
SNX17-204ENST00000453453 TRIM5Q9C035 493 aa17.96■□□□□ 0.47
SNX17-204ENST00000453453 POLR3EQ9NVU0 708 aa17.96■□□□□ 0.47
SNX17-204ENST00000453453 RTEL1Q9NZ71 1219 aa17.96■□□□□ 0.47
SNX17-204ENST00000453453 RBBP6Q7Z6E9 1792 aaKnown RBP17.96■□□□□ 0.47
SNX17-204ENST00000453453 OSBPP22059 807 aa17.95■□□□□ 0.46
SNX17-204ENST00000453453 GJA5P36382 358 aa17.95■□□□□ 0.46
SNX17-204ENST00000453453 TRAPPC10P48553 1259 aa17.95■□□□□ 0.46
SNX17-204ENST00000453453 OAZ1P54368 228 aa17.95■□□□□ 0.46
SNX17-204ENST00000453453 CEBPZQ03701 1054 aaKnown RBP17.95■□□□□ 0.46
SNX17-204ENST00000453453 STK38Q15208 465 aa17.95■□□□□ 0.46
SNX17-204ENST00000453453 LUZP1Q86V48 1076 aa17.95■□□□□ 0.46
SNX17-204ENST00000453453 DRC7Q8IY82 874 aa17.95■□□□□ 0.46
SNX17-204ENST00000453453 ZNF397Q8NF99 534 aaPredicted RBP17.95■□□□□ 0.46
SNX17-204ENST00000453453 USP28Q96RU2 1077 aa17.95■□□□□ 0.46
SNX17-204ENST00000453453 DACT1Q9NYF0 836 aa17.95■□□□□ 0.46
SNX17-204ENST00000453453 CEP131Q9UPN4 1083 aa17.95■□□□□ 0.46
SNX17-204ENST00000453453 M0R2N6 131 aa17.94■□□□□ 0.46
SNX17-204ENST00000453453 TOMM70O94826 608 aa17.94■□□□□ 0.46
SNX17-204ENST00000453453 TUBB4AP04350 444 aa17.94■□□□□ 0.46
SNX17-204ENST00000453453 NONOQ15233 471 aaKnown RBP eCLIP17.94■□□□□ 0.46
SNX17-204ENST00000453453 ANO1Q5XXA6 986 aa17.94■□□□□ 0.46
SNX17-204ENST00000453453 CPXCR1Q8N123 301 aa17.94■□□□□ 0.46
SNX17-204ENST00000453453 MB21D1Q8N884 522 aa17.94■□□□□ 0.46
SNX17-204ENST00000453453 RASGRP4Q8TDF6 673 aa17.94■□□□□ 0.46
SNX17-204ENST00000453453 RAVER2Q9HCJ3 691 aaKnown RBP17.94■□□□□ 0.46
SNX17-204ENST00000453453 BIN2Q9UBW5 565 aaPredicted RBP17.94■□□□□ 0.46
SNX17-204ENST00000453453 SPDYE16A6NNV3 312 aaPredicted RBP17.94■□□□□ 0.46
SNX17-204ENST00000453453 YEATS4O95619 227 aa17.94■□□□□ 0.46
SNX17-204ENST00000453453 ZNF165P49910 485 aa17.94■□□□□ 0.46
SNX17-204ENST00000453453 SF3A1Q15459 793 aaKnown RBP17.94■□□□□ 0.46
SNX17-204ENST00000453453 JAKMIP3Q5VZ66 844 aa17.94■□□□□ 0.46
SNX17-204ENST00000453453 SPRYD7Q5W111 196 aa17.94■□□□□ 0.46
SNX17-204ENST00000453453 PNMA3Q9UL41 463 aa17.94■□□□□ 0.46
SNX17-204ENST00000453453 ADAMTS5Q9UNA0 930 aa17.94■□□□□ 0.46
SNX17-204ENST00000453453 A0A0G2JMZ2 1700 aa17.93■□□□□ 0.46
SNX17-204ENST00000453453 ZNF536O15090 1300 aa17.93■□□□□ 0.46
SNX17-204ENST00000453453 BMP15O95972 392 aa17.93■□□□□ 0.46
SNX17-204ENST00000453453 ALAS1P13196 640 aa17.93■□□□□ 0.46
SNX17-204ENST00000453453 ATP2B1P20020 1258 aa17.93■□□□□ 0.46
SNX17-204ENST00000453453 YY1P25490 414 aa17.93■□□□□ 0.46
SNX17-204ENST00000453453 ZNF157P51786 506 aaPredicted RBP17.93■□□□□ 0.46
SNX17-204ENST00000453453 AP3B2Q13367 1082 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms