RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 MLXIPLQ9NP71 852 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 TRIM10Q9UDY6 481 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 ATF5Q9Y2D1 282 aaPredicted RBP8.51□□□□□ -1.05
RIF1-206ENST00000453091 TRIM66O15016 1216 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 LRRN2O75325 713 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 GBP1P32455 592 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 FAM26FQ5R3K3 315 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 LMNTD2Q8IXW0 634 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 TMEM87AQ8NBN3 555 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 P2RX5Q93086 422 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 LBHD1Q9BQE6 289 aaPredicted RBP8.51□□□□□ -1.05
RIF1-206ENST00000453091 ERVV-2B6SEH9 535 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 KCNQ2O43526 872 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 ATF7P17544 494 aaPredicted RBP8.51□□□□□ -1.05
RIF1-206ENST00000453091 USP17L2Q6R6M4 530 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 TMC4Q7Z404 712 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 IFT74Q96LB3 600 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 SWAP70Q9UH65 585 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 GGT7Q9UJ14 662 aa8.51□□□□□ -1.05
RIF1-206ENST00000453091 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.51□□□□□ -1.05
RIF1-206ENST00000453091 KIF21AQ7Z4S6 1674 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 WDR91A4D1P6 747 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 NDUFA10O95299 355 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 DLATP10515 647 aaKnown RBP8.5□□□□□ -1.05
RIF1-206ENST00000453091 HDLBPQ00341 1268 aaKnown RBP8.5□□□□□ -1.05
RIF1-206ENST00000453091 VPS52Q8N1B4 723 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 PPM1KQ8N3J5 372 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 DDX25Q9UHL0 483 aaKnown RBP8.5□□□□□ -1.05
RIF1-206ENST00000453091 FEZ2Q9UHY8 353 aaPredicted RBP8.5□□□□□ -1.05
RIF1-206ENST00000453091 PCDHA13Q9Y5I0 950 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 PRDM15P57071 1507 aaPredicted RBP8.5□□□□□ -1.05
RIF1-206ENST00000453091 SNCBQ16143 134 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 FMR1NBQ8N0W7 255 aaPredicted RBP8.5□□□□□ -1.05
RIF1-206ENST00000453091 RIN2Q8WYP3 895 aaPredicted RBP8.5□□□□□ -1.05
RIF1-206ENST00000453091 ADAM21Q9UKJ8 722 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 K7ENM7 598 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 PLCG2P16885 1265 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 DCUN1D2Q6PH85 259 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 MB21D1Q8N884 522 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 PDE8BO95263 885 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 TPD52P55327 224 aaPredicted RBP8.5□□□□□ -1.05
RIF1-206ENST00000453091 MTMR3Q13615 1198 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 USP37Q86T82 979 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 KCNV2Q8TDN2 545 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 NAP1L3Q99457 506 aaPredicted RBP8.5□□□□□ -1.05
RIF1-206ENST00000453091 SLC24A3Q9HC58 644 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 ZNF185O15231 689 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 AP5Z1O43299 807 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 MYCP01106 439 aaPredicted RBP8.5□□□□□ -1.05
RIF1-206ENST00000453091 CYP2E1P05181 493 aaPredicted RBP8.5□□□□□ -1.05
RIF1-206ENST00000453091 ALDH3A1P30838 453 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 SMAD1Q15797 465 aaKnown RBP8.5□□□□□ -1.05
RIF1-206ENST00000453091 CASC4Q6P4E1 433 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 TBC1D1Q86TI0 1168 aaPredicted RBP8.5□□□□□ -1.05
RIF1-206ENST00000453091 CCDC110Q8TBZ0 833 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 TBCKQ8TEA7 893 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 INTUQ9ULD6 942 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 USH1CQ9Y6N9 552 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 ARHGAP42A6NI28 874 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 TNNI1P19237 187 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 POLD1P28340 1107 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 IGBP1P78318 339 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 DHX9Q08211 1270 aaKnown RBP8.5□□□□□ -1.05
RIF1-206ENST00000453091 SCYL2Q6P3W7 929 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 PSTPIP2Q9H939 334 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 TXNDC16Q9P2K2 825 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 G3BP2Q9UN86 482 aaKnown RBP8.5□□□□□ -1.05
RIF1-206ENST00000453091 TTLL3Q9Y4R7 772 aa8.5□□□□□ -1.05
RIF1-206ENST00000453091 CLGNO14967 610 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 H2AFZP0C0S5 128 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 SLFN14P0C7P3 912 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 XRCC5P13010 732 aaKnown RBP8.49□□□□□ -1.05
RIF1-206ENST00000453091 SARNPP82979 210 aaKnown RBP8.49□□□□□ -1.05
RIF1-206ENST00000453091 CCZ1BP86790 482 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 CCZ1P86791 482 aaPredicted RBP8.49□□□□□ -1.05
RIF1-206ENST00000453091 H2AFVQ71UI9 128 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 RILPQ96NA2 401 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.49□□□□□ -1.05
RIF1-206ENST00000453091 PTCH1Q13635 1447 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 MCAMP43121 646 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 MUM1Q2TAK8 710 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 ZNF658Q5TYW1 1059 aaPredicted RBP8.49□□□□□ -1.05
RIF1-206ENST00000453091 TAOK1Q7L7X3 1001 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 ENOX1Q8TC92 643 aaKnown RBP8.49□□□□□ -1.05
RIF1-206ENST00000453091 HPS3Q969F9 1004 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 KANSL2Q9H9L4 492 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 SENP2Q9HC62 589 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 STAT1P42224 750 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 ERFP50548 548 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 GFPT1Q06210 699 aaPredicted RBP8.49□□□□□ -1.05
RIF1-206ENST00000453091 CYP4F22Q6NT55 531 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 NFRKBQ6P4R8 1299 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 SHC4Q6S5L8 630 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 TRIML1Q8N9V2 468 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 KIFAP3Q92845 792 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 TMEM260Q9NX78 707 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 GOLGA8IPA6NC78 632 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 GOLGA8JA6NMD2 632 aa8.49□□□□□ -1.05
RIF1-206ENST00000453091 TCP1P17987 556 aaKnown RBP8.49□□□□□ -1.05
RIF1-206ENST00000453091 EEPD1Q7L9B9 569 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms